Genome Explorer: Rothia dentocariosa 1233_RDEN (SEQF6840.1)
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PROKKA Annotation for SEQF6840.1
Genome selected: Rothia dentocariosa 1233_RDEN | |||
Contigs: | 121 | Bases: | 2476244 bps |
CDS: | 2125 | rRNA: | 2 |
tmRNA: | 1 | tRNA: | 39 |
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# | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
---|---|---|---|---|---|---|---|---|
2001 | SEQF6840.1_JVXS01000115.1 | SEQF6840.1_01193 | open | 414 [NA] | 137 [AA] | 642-1055 | hypothetical protein | |
2002 | SEQF6840.1_JVXS01000115.1 | SEQF6840.1_01194 | open | 243 [NA] | 80 [AA] | 1162-1404 | hypothetical protein | |
2003 | SEQF6840.1_JVXS01000116.1 | SEQF6840.1_01195 | open | 306 [NA] | 101 [AA] | 71-376 | hypothetical protein | |
2004 | SEQF6840.1_JVXS01000116.1 | SEQF6840.1_01196 | open | 177 [NA] | 58 [AA] | 566-742 | hypothetical protein | |
2005 | SEQF6840.1_JVXS01000117.1 | SEQF6840.1_01197 | open | 552 [NA] | 183 [AA] | 14-565 | hypothetical protein | |
2006 | SEQF6840.1_JVXS01000118.1 | SEQF6840.1_01198 | open | 291 [NA] | 96 [AA] | 47-337 | IS200IS605 family transposase ISMex20 | |
2007 | SEQF6840.1_JVXS01000118.1 | SEQF6840.1_01199 | open | 1293 [NA] | 430 [AA] | 431-1723 | hypothetical protein | |
2008 | SEQF6840.1_JVXS01000118.1 | SEQF6840.1_01200 | open | 168 [NA] | 55 [AA] | 1782-1949 | hypothetical protein | |
2009 | SEQF6840.1_JVXS01000118.1 | SEQF6840.1_01201 | open | 357 [NA] | 118 [AA] | 1946-2302 | hypothetical protein | |
2010 | SEQF6840.1_JVXS01000118.1 | SEQF6840.1_01202 | open | 1470 [NA] | 489 [AA] | 2610-4079 | pbuG_2 | Guaninehypoxanthine permease PbuG |
2011 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01203 | open | 597 [NA] | 198 [AA] | 108-704 | hypothetical protein | |
2012 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01204 | open | 624 [NA] | 207 [AA] | 975-1598 | hypothetical protein | |
2013 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01205 | open | 267 [NA] | 88 [AA] | 1580-1846 | hypothetical protein | |
2014 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01206 | open | 417 [NA] | 138 [AA] | 2058-2474 | hypothetical protein | |
2015 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01207 | open | 288 [NA] | 95 [AA] | 2614-2901 | hypothetical protein | |
2016 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01208 | open | 1245 [NA] | 414 [AA] | 3097-4341 | hypothetical protein | |
2017 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01209 | open | 915 [NA] | 304 [AA] | 4713-5627 | menA | 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase |
2018 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01210 | open | 1527 [NA] | 508 [AA] | 5678-7204 | menE | 2-succinylbenzoate--CoA ligase |
2019 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01211 | open | 987 [NA] | 328 [AA] | 7216-8202 | menB | 1%2C4-dihydroxy-2-naphthoyl-CoA synthase |
2020 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01212 | open | 1383 [NA] | 460 [AA] | 8477-9859 | hypothetical protein | |
2021 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01213 | open | 1497 [NA] | 498 [AA] | 9969-11465 | putP | High-affinity proline transporter PutP |
2022 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01214 | open | 993 [NA] | 330 [AA] | 11767-12759 | gluQ | Glutamyl-Q tRNA(Asp) synthetase |
2023 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01215 | open | 894 [NA] | 297 [AA] | 12933-13826 | hypothetical protein | |
2024 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01216 | open | 1932 [NA] | 643 [AA] | 13984-15915 | menD | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase |
2025 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01217 | open | 1053 [NA] | 350 [AA] | 16018-17070 | menC | o-succinylbenzoate synthase |
2026 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01218 | open | 1494 [NA] | 497 [AA] | 17212-18705 | hypothetical protein | |
2027 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01219 | open | 378 [NA] | 125 [AA] | 18851-19228 | hypothetical protein | |
2028 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01220 | open | 984 [NA] | 327 [AA] | 19337-20320 | hypothetical protein | |
2029 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01221 | open | 816 [NA] | 271 [AA] | 20335-21150 | hypothetical protein | |
2030 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01222 | open | 804 [NA] | 267 [AA] | 21355-22158 | glnQ_2 | Glutamine transport ATP-binding protein GlnQ |
2031 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01223 | open | 804 [NA] | 267 [AA] | 22186-22989 | hypothetical protein | |
2032 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01224 | open | 834 [NA] | 277 [AA] | 23077-23910 | artP | Arginine-binding extracellular protein ArtP |
2033 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01225 | open | 726 [NA] | 241 [AA] | 24214-24939 | menG | Demethylmenaquinone methyltransferase |
2034 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01226 | open | 1062 [NA] | 353 [AA] | 25008-26069 | ispB_1 | Octaprenyl diphosphate synthase |
2035 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01227 | open | 1311 [NA] | 436 [AA] | 26189-27499 | putative protein | |
2036 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01228 | open | 1611 [NA] | 536 [AA] | 27789-29399 | hypothetical protein | |
2037 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01229 | open | 138 [NA] | 45 [AA] | 29399-29536 | hypothetical protein | |
2038 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01230 | open | 1098 [NA] | 365 [AA] | 29686-30783 | rarD | Protein RarD |
2039 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01231 | open | 321 [NA] | 106 [AA] | 30870-31190 | hypothetical protein | |
2040 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01232 | open | 1521 [NA] | 506 [AA] | 31029-32549 | hypothetical protein | |
2041 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01233 | open | 1356 [NA] | 451 [AA] | 32804-34159 | hypothetical protein | |
2042 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01234 | open | 1491 [NA] | 496 [AA] | 34371-35861 | katA | Catalase |
2043 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01235 | open | 579 [NA] | 192 [AA] | 35991-36569 | hypothetical protein | |
2044 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01236 | open | 882 [NA] | 293 [AA] | 36865-37746 | htpX_2 | Protease HtpX |
2045 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01237 | open | 492 [NA] | 163 [AA] | 37853-38344 | hypothetical protein | |
2046 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01238 | open | 357 [NA] | 118 [AA] | 38494-38850 | hypothetical protein | |
2047 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01240 | open | 366 [NA] | 121 [AA] | 39256-39621 | trxC | Putative thioredoxin 2 |
2048 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01241 | open | 1140 [NA] | 379 [AA] | 39723-40862 | hypothetical protein | |
2049 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01242 | open | 1752 [NA] | 583 [AA] | 41082-42833 | hypothetical protein | |
2050 | SEQF6840.1_JVXS01000120.1 | SEQF6840.1_01243 | open | 2091 [NA] | 696 [AA] | 43299-45389 | deaD | ATP-dependent RNA helicase DeaD |
2051 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01244 | open | 729 [NA] | 242 [AA] | 67-795 | hypothetical protein | |
2052 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01245 | open | 1356 [NA] | 451 [AA] | 1335-2690 | hypothetical protein | |
2053 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01246 | open | 717 [NA] | 238 [AA] | 2784-3500 | Phage shock protein A | |
2054 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01247 | open | 2040 [NA] | 679 [AA] | 3690-5729 | hypothetical protein | |
2055 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01248 | open | 936 [NA] | 311 [AA] | 5966-6901 | hypothetical protein | |
2056 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01249 | open | 162 [NA] | 53 [AA] | 7112-7273 | hypothetical protein | |
2057 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01250 | open | 1335 [NA] | 444 [AA] | 7571-8905 | hypothetical protein | |
2058 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01251 | open | 816 [NA] | 271 [AA] | 9101-9916 | etfB | Electron transfer flavoprotein subunit beta |
2059 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01252 | open | 1005 [NA] | 334 [AA] | 9935-10939 | etfA | Electron transfer flavoprotein subunit alpha |
2060 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01253 | open | 606 [NA] | 201 [AA] | 11004-11609 | hypothetical protein | |
2061 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01254 | open | 534 [NA] | 177 [AA] | 11614-12147 | trmL | tRNA (cytidine(34)-2-O)-methyltransferase |
2062 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01255 | open | 1230 [NA] | 409 [AA] | 12219-13448 | iscS | IscS-like cysteine desulfurase |
2063 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01256 | open | 1212 [NA] | 403 [AA] | 13546-14757 | mnmA | tRNA-specific 2-thiouridylase MnmA |
2064 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01257 | open | 390 [NA] | 129 [AA] | 14782-15171 | hypothetical protein | |
2065 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01258 | open | 1260 [NA] | 419 [AA] | 15189-16448 | hypothetical protein | |
2066 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01259 | open | 696 [NA] | 231 [AA] | 16486-17181 | mtrA | DNA-binding response regulator MtrA |
2067 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01260 | open | 1749 [NA] | 582 [AA] | 17236-18984 | mtrB | Sensor histidine kinase MtrB |
2068 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01261 | open | 1743 [NA] | 580 [AA] | 18984-20726 | lpqB | Lipoprotein LpqB |
2069 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01262 | open | 810 [NA] | 269 [AA] | 20733-21542 | hypothetical protein | |
2070 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01263 | open | 636 [NA] | 211 [AA] | 21730-22365 | hpf | Ribosome hibernation promotion factor |
2071 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01264 | open | 2610 [NA] | 869 [AA] | 22618-25227 | secA | Protein translocase subunit SecA |
2072 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01265 | open | 630 [NA] | 209 [AA] | 25302-25931 | hypothetical protein | |
2073 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01266 | open | 1026 [NA] | 341 [AA] | 25989-27014 | hypothetical protein | |
2074 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01267 | open | 576 [NA] | 191 [AA] | 27205-27780 | hypothetical protein | |
2075 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01268 | open | 231 [NA] | 76 [AA] | 27777-28007 | hypothetical protein | |
2076 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01269 | open | 651 [NA] | 216 [AA] | 28404-29054 | hypothetical protein | |
2077 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01270 | open | 1554 [NA] | 517 [AA] | 29055-30608 | hypothetical protein | |
2078 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01271 | open | 1566 [NA] | 521 [AA] | 30762-32327 | pdtaS | putative sensor histidine kinase pdtaS |
2079 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01272 | open | 249 [NA] | 82 [AA] | 32433-32681 | whiB1 | Transcriptional regulator WhiB1 |
2080 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01273 | open | 477 [NA] | 158 [AA] | 33093-33569 | hypothetical protein | |
2081 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01274 | open | 4290 [NA] | 1429 [AA] | 33572-37861 | hypothetical protein | |
2082 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01275 | open | 1188 [NA] | 395 [AA] | 38364-39551 | glf | UDP-galactopyranose mutase |
2083 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01276 | open | 2010 [NA] | 669 [AA] | 39554-41563 | glfT2 | Galactofuranosyltransferase GlfT2 |
2084 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01277 | open | 879 [NA] | 292 [AA] | 41560-42438 | hypothetical protein | |
2085 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01278 | open | 768 [NA] | 255 [AA] | 42444-43211 | btuD_9 | Vitamin B12 import ATP-binding protein BtuD |
2086 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01279 | open | 1263 [NA] | 420 [AA] | 43477-44739 | hypothetical protein | |
2087 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01280 | open | 855 [NA] | 284 [AA] | 44739-45593 | hypothetical protein | |
2088 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01281 | open | 933 [NA] | 310 [AA] | 45590-46522 | hypothetical protein | |
2089 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01282 | open | 219 [NA] | 72 [AA] | 46585-46803 | hypothetical protein | |
2090 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01283 | open | 339 [NA] | 112 [AA] | 46880-47218 | hypothetical protein | |
2091 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01284 | open | 519 [NA] | 172 [AA] | 47196-47714 | hypothetical protein | |
2092 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01285 | open | 471 [NA] | 156 [AA] | 47725-48195 | hypothetical protein | |
2093 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01286 | open | 1128 [NA] | 375 [AA] | 48264-49391 | prfB | Peptide chain release factor 2 |
2094 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01287 | open | 495 [NA] | 164 [AA] | 49406-49900 | smpB | SsrA-binding protein |
2095 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01288 | open | 477 [NA] | 158 [AA] | 50109-50585 | hypothetical protein | |
2096 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01289 | open | 1236 [NA] | 411 [AA] | 50815-52050 | hypothetical protein | |
2097 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01291 | open | 561 [NA] | 186 [AA] | 52969-53529 | hypothetical protein | |
2098 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01292 | open | 813 [NA] | 270 [AA] | 53666-54478 | hisN | Histidinol-phosphatase |
2099 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01293 | open | 1125 [NA] | 374 [AA] | 54556-55680 | rsgA_2 | Small ribosomal subunit biogenesis GTPase RsgA |
2100 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01294 | open | 1578 [NA] | 525 [AA] | 55677-57254 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase |
2101 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01295 | open | 291 [NA] | 96 [AA] | 57375-57665 | hypothetical protein | |
2102 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01296 | open | 642 [NA] | 213 [AA] | 57702-58343 | sigR | ECF RNA polymerase sigma factor SigR |
2103 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01297 | open | 597 [NA] | 198 [AA] | 58816-59412 | hypothetical protein | |
2104 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01298 | open | 3831 [NA] | 1276 [AA] | 59652-63482 | odhA | 2-oxoglutarate dehydrogenase E1E2 component |
2105 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01299 | open | 1353 [NA] | 450 [AA] | 63848-65200 | hypothetical protein | |
2106 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01300 | open | 1095 [NA] | 364 [AA] | 65197-66291 | putative protein | |
2107 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01301 | open | 933 [NA] | 310 [AA] | 66486-67418 | mntA | Manganese-binding lipoprotein MntA |
2108 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01302 | open | 987 [NA] | 328 [AA] | 67419-68405 | btuD_10 | Vitamin B12 import ATP-binding protein BtuD |
2109 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01303 | open | 951 [NA] | 316 [AA] | 68402-69352 | znuB | High-affinity zinc uptake system membrane protein ZnuB |
2110 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01304 | open | 489 [NA] | 162 [AA] | 69479-69967 | zur | Zinc uptake regulation protein |
2111 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01305 | open | 660 [NA] | 219 [AA] | 70137-70796 | hypothetical protein | |
2112 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01306 | open | 429 [NA] | 142 [AA] | 70812-71240 | putative HIT-like protein | |
2113 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01307 | open | 750 [NA] | 249 [AA] | 71468-72217 | alsD | Alpha-acetolactate decarboxylase |
2114 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01308 | open | 216 [NA] | 71 [AA] | 72382-72597 | hypothetical protein | |
2115 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01309 | open | 483 [NA] | 160 [AA] | 72894-73376 | hypothetical protein | |
2116 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01310 | open | 867 [NA] | 288 [AA] | 73492-74358 | glcU | putative glucose uptake protein GlcU |
2117 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01311 | open | 516 [NA] | 171 [AA] | 74581-75096 | hypothetical protein | |
2118 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01312 | open | 1425 [NA] | 474 [AA] | 75711-77135 | glnA1 | Glutamine synthetase |
2119 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01313 | open | 450 [NA] | 149 [AA] | 77326-77775 | hypothetical protein | |
2120 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01314 | open | 720 [NA] | 239 [AA] | 77886-78605 | putative protein | |
2121 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01315 | open | 1008 [NA] | 335 [AA] | 78861-79868 | lipA | Lipoyl synthase |
2122 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01316 | open | 705 [NA] | 234 [AA] | 80077-80781 | lipB | Octanoyltransferase |
2123 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01317 | open | 1410 [NA] | 469 [AA] | 81018-82427 | hypothetical protein | |
2124 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01318 | open | 348 [NA] | 115 [AA] | 82572-82919 | hypothetical protein | |
2125 | SEQF6840.1_JVXS01000121.1 | SEQF6840.1_01319 | open | 906 [NA] | 301 [AA] | 83065-83970 | aceF | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex |