Genome Explorer: Agrobacterium tumefaciens 12D1 (SEQF8729.1)
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PROKKA Annotation for SEQF8729.1
| Genome selected: Agrobacterium tumefaciens 12D1 | |||
| Contigs: | 3 | Bases: | 5446032 bps |
| CDS: | 5043 | rRNA: | 12 |
| tmRNA: | 1 | tRNA: | 55 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 5001 | SEQF8729.1_CP033033.1 | SEQF8729.1_05122 | open | 801 [NA] | 266 [AA] | 118065-118865 | ugpQ | Glycerophosphodiester phosphodiesterase%2C cytoplasmic |
| 5002 | SEQF8729.1_CP033033.1 | SEQF8729.1_05123 | open | 819 [NA] | 272 [AA] | 118858-119676 | cysQ_5 | 3(2)%2C5-bisphosphate nucleotidase CysQ |
| 5003 | SEQF8729.1_CP033033.1 | SEQF8729.1_05124 | open | 510 [NA] | 169 [AA] | 119911-120420 | hypothetical protein | |
| 5004 | SEQF8729.1_CP033033.1 | SEQF8729.1_05125 | open | 981 [NA] | 326 [AA] | 120473-121453 | hypothetical protein | |
| 5005 | SEQF8729.1_CP033033.1 | SEQF8729.1_05126 | open | 747 [NA] | 248 [AA] | 121814-122560 | gph_5 | Phosphoglycolate phosphatase |
| 5006 | SEQF8729.1_CP033033.1 | SEQF8729.1_05127 | open | 894 [NA] | 297 [AA] | 122750-123643 | dppC_5 | Dipeptide transport system permease protein DppC |
| 5007 | SEQF8729.1_CP033033.1 | SEQF8729.1_05128 | open | 933 [NA] | 310 [AA] | 123643-124575 | dppB_10 | Dipeptide transport system permease protein DppB |
| 5008 | SEQF8729.1_CP033033.1 | SEQF8729.1_05129 | open | 726 [NA] | 241 [AA] | 124578-125303 | hypothetical protein | |
| 5009 | SEQF8729.1_CP033033.1 | SEQF8729.1_05130 | open | 840 [NA] | 279 [AA] | 125300-126139 | gsiA_16 | Glutathione import ATP-binding protein GsiA |
| 5010 | SEQF8729.1_CP033033.1 | SEQF8729.1_05131 | open | 1029 [NA] | 342 [AA] | 126136-127164 | oppD_8 | Oligopeptide transport ATP-binding protein OppD |
| 5011 | SEQF8729.1_CP033033.1 | SEQF8729.1_05132 | open | 1641 [NA] | 546 [AA] | 127164-128804 | sgrR | HTH-type transcriptional regulator SgrR |
| 5012 | SEQF8729.1_CP033033.1 | SEQF8729.1_05133 | open | 648 [NA] | 215 [AA] | 129021-129668 | gpmA_3 | 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase |
| 5013 | SEQF8729.1_CP033033.1 | SEQF8729.1_05134 | open | 996 [NA] | 331 [AA] | 129692-130687 | eryD_4 | Erythritol catabolism regulatory protein EryD |
| 5014 | SEQF8729.1_CP033033.1 | SEQF8729.1_05135 | open | 705 [NA] | 234 [AA] | 130722-131426 | traR_2 | Transcriptional activator protein TraR |
| 5015 | SEQF8729.1_CP033033.1 | SEQF8729.1_05136 | open | 210 [NA] | 69 [AA] | 131440-131649 | hypothetical protein | |
| 5016 | SEQF8729.1_CP033033.1 | SEQF8729.1_05137 | open | 1305 [NA] | 434 [AA] | 131722-133026 | hypothetical protein | |
| 5017 | SEQF8729.1_CP033033.1 | SEQF8729.1_05138 | open | 1062 [NA] | 353 [AA] | 133045-134106 | ocd_2 | Ornithine cyclodeaminase |
| 5018 | SEQF8729.1_CP033033.1 | SEQF8729.1_05139 | open | 1083 [NA] | 360 [AA] | 134154-135236 | odh | Opine dehydrogenase |
| 5019 | SEQF8729.1_CP033033.1 | SEQF8729.1_05140 | open | 861 [NA] | 286 [AA] | 135312-136172 | arcA_3 | Arginase |
| 5020 | SEQF8729.1_CP033033.1 | SEQF8729.1_05141 | open | 1419 [NA] | 472 [AA] | 136316-137734 | hcnB_2 | Hydrogen cyanide synthase subunit HcnB |
| 5021 | SEQF8729.1_CP033033.1 | SEQF8729.1_05142 | open | 294 [NA] | 97 [AA] | 137731-138024 | hypothetical protein | |
| 5022 | SEQF8729.1_CP033033.1 | SEQF8729.1_05143 | open | 1119 [NA] | 372 [AA] | 138021-139139 | thiO | Glycine oxidase |
| 5023 | SEQF8729.1_CP033033.1 | SEQF8729.1_05144 | open | 2037 [NA] | 678 [AA] | 139750-141786 | apc3_2 | Acetophenone carboxylase gamma subunit |
| 5024 | SEQF8729.1_CP033033.1 | SEQF8729.1_05145 | open | 1956 [NA] | 651 [AA] | 141790-143745 | apc4_2 | Acetophenone carboxylase delta subunit |
| 5025 | SEQF8729.1_CP033033.1 | SEQF8729.1_05146 | open | 831 [NA] | 276 [AA] | 143864-144694 | hcaR | Hca operon transcriptional activator HcaR |
| 5026 | SEQF8729.1_CP033033.1 | SEQF8729.1_05147 | open | 726 [NA] | 241 [AA] | 144897-145622 | occM_3 | Octopine transport system permease protein OccM |
| 5027 | SEQF8729.1_CP033033.1 | SEQF8729.1_05148 | open | 756 [NA] | 251 [AA] | 145624-146379 | occQ | Octopine transport system permease protein OccQ |
| 5028 | SEQF8729.1_CP033033.1 | SEQF8729.1_05149 | open | 852 [NA] | 283 [AA] | 146407-147258 | nocT | Nopaline-binding periplasmic protein |
| 5029 | SEQF8729.1_CP033033.1 | SEQF8729.1_05150 | open | 774 [NA] | 257 [AA] | 147323-148096 | occP_3 | Octopine permease ATP-binding protein P |
| 5030 | SEQF8729.1_CP033033.1 | SEQF8729.1_05151 | open | 903 [NA] | 300 [AA] | 148346-149248 | hypothetical protein | |
| 5031 | SEQF8729.1_CP033033.1 | SEQF8729.1_05152 | open | 129 [NA] | 42 [AA] | 149252-149380 | hypothetical protein | |
| 5032 | SEQF8729.1_CP033033.1 | SEQF8729.1_05153 | open | 1308 [NA] | 435 [AA] | 149377-150684 | hypothetical protein | |
| 5033 | SEQF8729.1_CP033033.1 | SEQF8729.1_05154 | open | 477 [NA] | 158 [AA] | 150699-151175 | hypothetical protein | |
| 5034 | SEQF8729.1_CP033033.1 | SEQF8729.1_05155 | open | 855 [NA] | 284 [AA] | 151175-152029 | hypothetical protein | |
| 5035 | SEQF8729.1_CP033033.1 | SEQF8729.1_05156 | open | 663 [NA] | 220 [AA] | 152047-152709 | hypothetical protein | |
| 5036 | SEQF8729.1_CP033033.1 | SEQF8729.1_05157 | open | 1203 [NA] | 400 [AA] | 152716-153918 | hypothetical protein | |
| 5037 | SEQF8729.1_CP033033.1 | SEQF8729.1_05158 | open | 219 [NA] | 72 [AA] | 153912-154130 | hypothetical protein | |
| 5038 | SEQF8729.1_CP033033.1 | SEQF8729.1_05159 | open | 810 [NA] | 269 [AA] | 154127-154936 | hypothetical protein | |
| 5039 | SEQF8729.1_CP033033.1 | SEQF8729.1_05160 | open | 2469 [NA] | 822 [AA] | 154908-157376 | virB4_3 | Type IV secretion system protein virB4 |
| 5040 | SEQF8729.1_CP033033.1 | SEQF8729.1_05161 | open | 300 [NA] | 99 [AA] | 157387-157686 | hypothetical protein | |
| 5041 | SEQF8729.1_CP033033.1 | SEQF8729.1_05162 | open | 408 [NA] | 135 [AA] | 157679-158086 | hypothetical protein | |
| 5042 | SEQF8729.1_CP033033.1 | SEQF8729.1_05163 | open | 972 [NA] | 323 [AA] | 158076-159047 | Type IV secretion system protein VirB11 | |
| 5043 | SEQF8729.1_CP033033.1 | SEQF8729.1_05164 | open | 636 [NA] | 211 [AA] | 159044-159679 | hypothetical protein |