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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Agrobacterium tumefaciens 12D1 (SEQF8729.1)
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PROKKA Annotation for SEQF8729.1
Genome selected: Agrobacterium tumefaciens 12D1
Contigs:3 Bases:5446032 bps
CDS:5043 rRNA:12
tmRNA:1 tRNA:55
Annotation Table [page:11]
Number of Records Found: 5043 [11 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
5001 SEQF8729.1_CP033033.1 SEQF8729.1_05122 open 801 [NA] 266 [AA] 118065-118865 ugpQ Glycerophosphodiester phosphodiesterase%2C cytoplasmic
5002 SEQF8729.1_CP033033.1 SEQF8729.1_05123 open 819 [NA] 272 [AA] 118858-119676 cysQ_5 3(2)%2C5-bisphosphate nucleotidase CysQ
5003 SEQF8729.1_CP033033.1 SEQF8729.1_05124 open 510 [NA] 169 [AA] 119911-120420 hypothetical protein
5004 SEQF8729.1_CP033033.1 SEQF8729.1_05125 open 981 [NA] 326 [AA] 120473-121453 hypothetical protein
5005 SEQF8729.1_CP033033.1 SEQF8729.1_05126 open 747 [NA] 248 [AA] 121814-122560 gph_5 Phosphoglycolate phosphatase
5006 SEQF8729.1_CP033033.1 SEQF8729.1_05127 open 894 [NA] 297 [AA] 122750-123643 dppC_5 Dipeptide transport system permease protein DppC
5007 SEQF8729.1_CP033033.1 SEQF8729.1_05128 open 933 [NA] 310 [AA] 123643-124575 dppB_10 Dipeptide transport system permease protein DppB
5008 SEQF8729.1_CP033033.1 SEQF8729.1_05129 open 726 [NA] 241 [AA] 124578-125303 hypothetical protein
5009 SEQF8729.1_CP033033.1 SEQF8729.1_05130 open 840 [NA] 279 [AA] 125300-126139 gsiA_16 Glutathione import ATP-binding protein GsiA
5010 SEQF8729.1_CP033033.1 SEQF8729.1_05131 open 1029 [NA] 342 [AA] 126136-127164 oppD_8 Oligopeptide transport ATP-binding protein OppD
5011 SEQF8729.1_CP033033.1 SEQF8729.1_05132 open 1641 [NA] 546 [AA] 127164-128804 sgrR HTH-type transcriptional regulator SgrR
5012 SEQF8729.1_CP033033.1 SEQF8729.1_05133 open 648 [NA] 215 [AA] 129021-129668 gpmA_3 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
5013 SEQF8729.1_CP033033.1 SEQF8729.1_05134 open 996 [NA] 331 [AA] 129692-130687 eryD_4 Erythritol catabolism regulatory protein EryD
5014 SEQF8729.1_CP033033.1 SEQF8729.1_05135 open 705 [NA] 234 [AA] 130722-131426 traR_2 Transcriptional activator protein TraR
5015 SEQF8729.1_CP033033.1 SEQF8729.1_05136 open 210 [NA] 69 [AA] 131440-131649 hypothetical protein
5016 SEQF8729.1_CP033033.1 SEQF8729.1_05137 open 1305 [NA] 434 [AA] 131722-133026 hypothetical protein
5017 SEQF8729.1_CP033033.1 SEQF8729.1_05138 open 1062 [NA] 353 [AA] 133045-134106 ocd_2 Ornithine cyclodeaminase
5018 SEQF8729.1_CP033033.1 SEQF8729.1_05139 open 1083 [NA] 360 [AA] 134154-135236 odh Opine dehydrogenase
5019 SEQF8729.1_CP033033.1 SEQF8729.1_05140 open 861 [NA] 286 [AA] 135312-136172 arcA_3 Arginase
5020 SEQF8729.1_CP033033.1 SEQF8729.1_05141 open 1419 [NA] 472 [AA] 136316-137734 hcnB_2 Hydrogen cyanide synthase subunit HcnB
5021 SEQF8729.1_CP033033.1 SEQF8729.1_05142 open 294 [NA] 97 [AA] 137731-138024 hypothetical protein
5022 SEQF8729.1_CP033033.1 SEQF8729.1_05143 open 1119 [NA] 372 [AA] 138021-139139 thiO Glycine oxidase
5023 SEQF8729.1_CP033033.1 SEQF8729.1_05144 open 2037 [NA] 678 [AA] 139750-141786 apc3_2 Acetophenone carboxylase gamma subunit
5024 SEQF8729.1_CP033033.1 SEQF8729.1_05145 open 1956 [NA] 651 [AA] 141790-143745 apc4_2 Acetophenone carboxylase delta subunit
5025 SEQF8729.1_CP033033.1 SEQF8729.1_05146 open 831 [NA] 276 [AA] 143864-144694 hcaR Hca operon transcriptional activator HcaR
5026 SEQF8729.1_CP033033.1 SEQF8729.1_05147 open 726 [NA] 241 [AA] 144897-145622 occM_3 Octopine transport system permease protein OccM
5027 SEQF8729.1_CP033033.1 SEQF8729.1_05148 open 756 [NA] 251 [AA] 145624-146379 occQ Octopine transport system permease protein OccQ
5028 SEQF8729.1_CP033033.1 SEQF8729.1_05149 open 852 [NA] 283 [AA] 146407-147258 nocT Nopaline-binding periplasmic protein
5029 SEQF8729.1_CP033033.1 SEQF8729.1_05150 open 774 [NA] 257 [AA] 147323-148096 occP_3 Octopine permease ATP-binding protein P
5030 SEQF8729.1_CP033033.1 SEQF8729.1_05151 open 903 [NA] 300 [AA] 148346-149248 hypothetical protein
5031 SEQF8729.1_CP033033.1 SEQF8729.1_05152 open 129 [NA] 42 [AA] 149252-149380 hypothetical protein
5032 SEQF8729.1_CP033033.1 SEQF8729.1_05153 open 1308 [NA] 435 [AA] 149377-150684 hypothetical protein
5033 SEQF8729.1_CP033033.1 SEQF8729.1_05154 open 477 [NA] 158 [AA] 150699-151175 hypothetical protein
5034 SEQF8729.1_CP033033.1 SEQF8729.1_05155 open 855 [NA] 284 [AA] 151175-152029 hypothetical protein
5035 SEQF8729.1_CP033033.1 SEQF8729.1_05156 open 663 [NA] 220 [AA] 152047-152709 hypothetical protein
5036 SEQF8729.1_CP033033.1 SEQF8729.1_05157 open 1203 [NA] 400 [AA] 152716-153918 hypothetical protein
5037 SEQF8729.1_CP033033.1 SEQF8729.1_05158 open 219 [NA] 72 [AA] 153912-154130 hypothetical protein
5038 SEQF8729.1_CP033033.1 SEQF8729.1_05159 open 810 [NA] 269 [AA] 154127-154936 hypothetical protein
5039 SEQF8729.1_CP033033.1 SEQF8729.1_05160 open 2469 [NA] 822 [AA] 154908-157376 virB4_3 Type IV secretion system protein virB4
5040 SEQF8729.1_CP033033.1 SEQF8729.1_05161 open 300 [NA] 99 [AA] 157387-157686 hypothetical protein
5041 SEQF8729.1_CP033033.1 SEQF8729.1_05162 open 408 [NA] 135 [AA] 157679-158086 hypothetical protein
5042 SEQF8729.1_CP033033.1 SEQF8729.1_05163 open 972 [NA] 323 [AA] 158076-159047 Type IV secretion system protein VirB11
5043 SEQF8729.1_CP033033.1 SEQF8729.1_05164 open 636 [NA] 211 [AA] 159044-159679 hypothetical protein