Genome Explorer: Helicobacter pylori Shi470 (SEQF1119.1)
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NCBI Annotation for SEQF1119.1
| Genome selected: Helicobacter pylori Shi470 | |||
| Contigs: | 1 | Bases: | 1608548 bps |
| CDS: | 1569 | rRNA: | 6 |
| tmRNA: | 0 | tRNA: | 36 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 1501 | CP001072.2 | ACD48970.1 JB | 1698 [NA] | 565 [AA] | 1545551-1547248 | HPSH_07925 | hypothetical protein |
| 1502 | CP001072.2 | ACD48971.1 JB | 729 [NA] | 242 [AA] | 1547259-1547987 | HPSH_07930 | putative outer membrane protein |
| 1503 | CP001072.2 | ACD48972.1 JB | 855 [NA] | 284 [AA] | 1548173-1549027 | HPSH_07935 | inorganic polyphosphate/ATP-NAD kinase |
| 1504 | CP001072.2 | ACD48973.1 JB | 1575 [NA] | 524 [AA] | 1549040-1550614 | HPSH_07940 | DNA repair protein |
| 1505 | CP001072.2 | ACD48974.1 JB | 1308 [NA] | 435 [AA] | 1550611-1551918 | HPSH_07945 | fibronectin/fibrinogen-binding protein |
| 1506 | CP001072.2 | ACD48975.1 JB | 297 [NA] | 98 [AA] | 1551937-1552233 | HPSH_07950 | hypothetical protein |
| 1507 | CP001072.2 | ACD48976.1 JB | 321 [NA] | 106 [AA] | 1552564-1552884 | HPSH_07955 | hypothetical protein |
| 1508 | CP001072.2 | ACD48977.1 JB | 330 [NA] | 109 [AA] | 1552923-1553252 | HPSH_07960 | hypothetical protein |
| 1509 | CP001072.2 | ACD48978.1 JB | 198 [NA] | 65 [AA] | 1553351-1553548 | HPSH_07965 | hypothetical protein |
| 1510 | CP001072.2 | ACD48979.1 JB | 864 [NA] | 287 [AA] | 1553522-1554385 | HPSH_07970 | DNA polymerase III subunit epsilon |
| 1511 | CP001072.2 | ACD48980.1 JB | 654 [NA] | 217 [AA] | 1554363-1555016 | HPSH_07975 | ribulose-phosphate 3-epimerase |
| 1512 | CP001072.2 | ACD48981.1 JB | 873 [NA] | 290 [AA] | 1555087-1555959 | HPSH_07980 | fructose-1,6-bisphosphatase |
| 1513 | CP001072.2 | ACD48982.1 JB | 204 [NA] | 67 [AA] | 1555959-1556162 | HPSH_07985 | hypothetical protein |
| 1514 | CP001072.2 | ACD48983.1 JB | 897 [NA] | 298 [AA] | 1556175-1557071 | HPSH_07990 | putative type II methylase protein |
| 1515 | CP001072.2 | ACD48984.1 JB | 732 [NA] | 243 [AA] | 1557064-1557795 | HPSH_07995 | hypothetical protein |
| 1516 | CP001072.2 | ACD48985.1 JB | 453 [NA] | 150 [AA] | 1557885-1558337 | HPSH_08000 | hypothetical protein |
| 1517 | CP001072.2 | ACD48986.1 JB | 1068 [NA] | 355 [AA] | 1558389-1559456 | HPSH_08005 | elongation factor Ts |
| 1518 | CP001072.2 | ACD48987.1 JB | 795 [NA] | 264 [AA] | 1559456-1560250 | HPSH_08010 | 30S ribosomal protein S2 |
| 1519 | CP001072.2 | ACD48988.1 JB | 87 [NA] | 28 [AA] | 1560343-1560429 | HPSH_08015 | hypothetical protein |
| 1520 | CP001072.2 | ACD48989.1 JB | 2850 [NA] | 949 [AA] | 1560501-1563350 | HPSH_08020 | helicase |
| 1521 | CP001072.2 | ACD48990.1 JB | 1350 [NA] | 449 [AA] | 1563341-1564690 | HPSH_08025 | Na+/H+ antiporter |
| 1522 | CP001072.2 | ACD48991.1 JB | 294 [NA] | 97 [AA] | 1564738-1565031 | HPSH_08030 | preprotein translocase subunit YajC |
| 1523 | CP001072.2 | ACD48992.1 JB | 1578 [NA] | 525 [AA] | 1565031-1566608 | HPSH_08035 | preprotein translocase subunit SecD |
| 1524 | CP001072.2 | ACD48993.1 JB | 972 [NA] | 323 [AA] | 1566617-1567588 | HPSH_08040 | preprotein translocase subunit SecF |
| 1525 | CP001072.2 | ACD48994.1 JB | 339 [NA] | 112 [AA] | 1567598-1567936 | HPSH_08045 | hypothetical protein |
| 1526 | CP001072.2 | ACD48995.1 JB | 2421 [NA] | 806 [AA] | 1567946-1570366 | HPSH_08050 | leucyl-tRNA synthetase |
| 1527 | CP001072.2 | ACD48996.1 JB | 513 [NA] | 170 [AA] | 1570363-1570875 | HPSH_08055 | hypothetical protein |
| 1528 | CP001072.2 | ACD48997.1 JB | 1170 [NA] | 389 [AA] | 1570865-1572034 | HPSH_08060 | folylpolyglutamate synthase |
| 1529 | CP001072.2 | ACD48998.1 JB | 936 [NA] | 311 [AA] | 1572969-1573904 | HPSH_08075 | toxR-activated gene (tagE) |
| 1530 | CP001072.2 | ACD48999.1 JB | 315 [NA] | 104 [AA] | 1573919-1574233 | HPSH_08080 | hypothetical protein |
| 1531 | CP001072.2 | ACD49000.1 JB | 3000 [NA] | 999 [AA] | 1574237-1577236 | HPSH_08085 | transcription-repair coupling factor |
| 1532 | CP001072.2 | ACD49001.1 JB | 504 [NA] | 167 [AA] | 1577361-1577864 | HPSH_08090 | ubiquinol cytochrome c oxidoreductase, Rieske 2Fe-2S subunit (fbcF) |
| 1533 | CP001072.2 | ACD49002.1 JB | 1239 [NA] | 412 [AA] | 1577875-1579113 | HPSH_08095 | ubiquinol cytochrome c oxidoreductase, cytochrome b subunit (fbcH) |
| 1534 | CP001072.2 | ACD49003.1 JB | 858 [NA] | 285 [AA] | 1579110-1579967 | HPSH_08100 | ubiquinol cytochrome c oxidoreductase, cytochrome c1 |
| 1535 | CP001072.2 | ACD49004.1 JB | 336 [NA] | 111 [AA] | 1580172-1580507 | HPSH_08105 | hypothetical protein |
| 1536 | CP001072.2 | ACD49005.1 JB | 1848 [NA] | 615 [AA] | 1580949-1582796 | HPSH_08110 | cell division protein |
| 1537 | CP001072.2 | ACD49006.1 JB | 330 [NA] | 109 [AA] | 1582952-1583281 | HPSH_08115 | flagellar hook-basal body protein FliE |
| 1538 | CP001072.2 | ACD49007.1 JB | 486 [NA] | 161 [AA] | 1583409-1583894 | HPSH_08120 | flagellar basal body rod protein FlgC |
| 1539 | CP001072.2 | ACD49008.1 JB | 423 [NA] | 140 [AA] | 1583907-1584329 | HPSH_08125 | flagellar basal body rod protein FlgB |
| 1540 | CP001072.2 | ACD49009.1 JB | 1167 [NA] | 388 [AA] | 1584538-1585704 | HPSH_08130 | putative rod shape-determining protein |
| 1541 | CP001072.2 | ACD49010.1 JB | 1002 [NA] | 333 [AA] | 1585728-1586729 | HPSH_08135 | hypothetical protein |
| 1542 | CP001072.2 | ACD49011.1 JB | 1008 [NA] | 335 [AA] | 1586928-1587935 | HPSH_08140 | iron(III) ABC transporter, periplasmic iron-binding protein (ceuE) |
| 1543 | CP001072.2 | ACD49012.1 JB | 597 [NA] | 198 [AA] | 1588174-1588770 | HPSH_08145 | putative peroxidase |
| 1544 | CP001072.2 | ACD49013.1 JB | 816 [NA] | 271 [AA] | 1588915-1589730 | HPSH_08150 | outer membrane protein |
| 1545 | CP001072.2 | ACD49014.1 JB | 1776 [NA] | 591 [AA] | 1589798-1591573 | HPSH_08155 | penicillin-binding protein 2 (pbp2) |
| 1546 | CP001072.2 | ACD49015.1 JB | 444 [NA] | 147 [AA] | 1591554-1591997 | HPSH_08160 | hypothetical protein |
| 1547 | CP001072.2 | ACD49016.1 JB | 627 [NA] | 208 [AA] | 1592010-1592636 | HPSH_08165 | GTPase EngB |
| 1548 | CP001072.2 | ACD49017.1 JB | 558 [NA] | 185 [AA] | 1592633-1593190 | HPSH_08170 | hypothetical protein |
| 1549 | CP001072.2 | ACD49018.1 JB | 594 [NA] | 197 [AA] | 1593190-1593783 | HPSH_08175 | hypothetical protein |
| 1550 | CP001072.2 | ACD49019.1 JB | 495 [NA] | 164 [AA] | 1593758-1594252 | HPSH_08180 | hypothetical protein |
| 1551 | CP001072.2 | ACD49020.1 JB | 948 [NA] | 315 [AA] | 1594249-1595196 | HPSH_08185 | rare lipoprotein A (rlpA) |
| 1552 | CP001072.2 | ACD49021.1 JB | 1113 [NA] | 370 [AA] | 1595196-1596308 | HPSH_08190 | putative regulatory protein |
| 1553 | CP001072.2 | ACD49022.1 JB | 765 [NA] | 254 [AA] | 1596409-1597173 | HPSH_08195 | DNAse |
| 1554 | CP001072.2 | ACD49023.1 JB | 621 [NA] | 206 [AA] | 1597248-1597868 | HPSH_08200 | riboflavin synthase subunit alpha |
| 1555 | CP001072.2 | ACD49024.1 JB | 273 [NA] | 90 [AA] | 1597869-1598141 | HPSH_08205 | FlhB-related flagellar biosynthesis protein |
| 1556 | CP001072.2 | ACD49025.1 JB | 984 [NA] | 327 [AA] | 1598163-1599146 | HPSH_08210 | ABC transporter, ATP-binding protein |
| 1557 | CP001072.2 | ACD49026.1 JB | 648 [NA] | 215 [AA] | 1599148-1599795 | HPSH_08215 | ABC transporter, permease protein |
| 1558 | CP001072.2 | ACD49027.1 JB | 432 [NA] | 143 [AA] | 1599984-1600415 | HPSH_08220 | hypothetical protein |
| 1559 | CP001072.2 | ACD49028.1 JB | 597 [NA] | 198 [AA] | 1600425-1601021 | HPSH_08225 | hypothetical protein |
| 1560 | CP001072.2 | ACD49029.1 JB | 999 [NA] | 332 [AA] | 1601021-1602019 | HPSH_08230 | undecaprenyl phosphate N-acetylglucosaminyltransferase |
| 1561 | CP001072.2 | ACD49030.1 JB | 789 [NA] | 262 [AA] | 1602164-1602952 | HPSH_08235 | pyridoxal phosphate biosynthetic protein PdxJ |
| 1562 | CP001072.2 | ACD49031.1 JB | 924 [NA] | 307 [AA] | 1602954-1603877 | HPSH_08240 | 4-hydroxythreonine-4-phosphate dehydrogenase |
| 1563 | CP001072.2 | ACD49032.1 JB | 1023 [NA] | 340 [AA] | 1603941-1604963 | HPSH_08245 | O-sialoglycoprotein endopeptidase |
| 1564 | CP001072.2 | ACD49033.1 JB | 789 [NA] | 262 [AA] | 1605142-1605930 | HPSH_08250 | flagellar basal body rod protein FlgG |
| 1565 | CP001072.2 | ACD49034.1 JB | 138 [NA] | 45 [AA] | 1606736-1606873 | HPSH_08265 | hypothetical protein |
| 1566 | CP001072.2 | ACD49035.1 JB | 141 [NA] | 46 [AA] | 1607319-1607459 | HPSH_08270 | hypothetical protein |
| 1567 | CP001072.2 | ACD49036.1 JB | 762 [NA] | 253 [AA] | 1607544-1608305 | HPSH_08275 | hypothetical protein |
| 1568 | CP001072.2 | ACE00760.1 JB | 927 [NA] | 308 [AA] | 1572034-1572960 | HPSH_08065 | tox-R activated gene |
| 1569 | CP001072.2 | ACE73643.1 JB | 2676 [NA] | 891 [AA] | 1463549-1466224 | HPSH_07540 | type II restriction modification enzyme methyltransferase |