Genome Explorer: Stenotrophomonas maltophilia 2013-SM12 (SEQF4355.1)
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NCBI Annotation for SEQF4355.1
| Genome selected: Stenotrophomonas maltophilia 2013-SM12 | |||
| Contigs: | 1 | Bases: | 4612229 bps |
| CDS: | 31 | rRNA: | 12 |
| tmRNA: | 1 | tRNA: | 74 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 4001 | CP088243.1 | UGB19609.1 JB | 1653 [NA] | 550 [AA] | 2187139-2188791 | LQ332_09890 | M28 family metallopeptidase |
| 4002 | CP088243.1 | UGB19610.1 JB | 297 [NA] | 98 [AA] | 2188919-2189215 | LQ332_09895 | hypothetical protein |
| 4003 | CP088243.1 | UGB19611.1 JB | 450 [NA] | 149 [AA] | 2221096-2221545 | LQ332_10065 | cyclin-dependent kinase inhibitor 3 family protein |
| 4004 | CP088243.1 | UGB19612.1 JB | 1551 [NA] | 516 [AA] | 2322482-2324032 | LQ332_10490 | beta-lactamase family protein |
| 4005 | CP088243.1 | UGB19613.1 JB | 408 [NA] | 135 [AA] | 2384294-2384701 | LQ332_10785 | YciI family protein |
| 4006 | CP088243.1 | UGB19614.1 JB | 1065 [NA] | 354 [AA] | 2425453-2426517 | LQ332_11000 | class I SAM-dependent methyltransferase |
| 4007 | CP088243.1 | UGB19615.1 JB | 1347 [NA] | 448 [AA] | 2448518-2449864 | LQ332_11115 | ATP-binding protein |
| 4008 | CP088243.1 | UGB19616.1 JB | 366 [NA] | 121 [AA] | 2467897-2468262 | LQ332_11180 | DUF4398 domain-containing protein |
| 4009 | CP088243.1 | UGB19617.1 JB | 948 [NA] | 315 [AA] | 2500788-2501735 | LQ332_11320 | NAD-dependent epimerase/dehydratase family protein |
| 4010 | CP088243.1 | UGB19618.1 JB | 1389 [NA] | 462 [AA] | 2503788-2505176 | LQ332_11335 | UbiA family prenyltransferase |
| 4011 | CP088243.1 | UGB19619.1 JB | 708 [NA] | 235 [AA] | 2553998-2554705 | LQ332_11520 | type II secretion system protein GspM |
| 4012 | CP088243.1 | UGB19620.1 JB | 402 [NA] | 133 [AA] | 2613163-2613564 | LQ332_11770 | division/cell wall cluster transcriptional repressor MraZ |
| 4013 | CP088243.1 | UGB19621.1 JB | 2157 [NA] | 718 [AA] | 2663240-2665396 | LQ332_11985 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
| 4014 | CP088243.1 | UGB19622.1 JB | 606 [NA] | 201 [AA] | 2670378-2670983 | LQ332_12010 | arylesterase |
| 4015 | CP088243.1 | UGB19623.1 JB | 492 [NA] | 163 [AA] | 2681088-2681579 | LQ332_12070 | dihydrofolate reductase |
| 4016 | CP088243.1 | UGB19624.1 JB | 666 [NA] | 221 [AA] | 2700174-2700839 | LQ332_12170 | peptide-methionine (S)-S-oxide reductase MsrA |
| 4017 | CP088243.1 | UGB19625.1 JB | 885 [NA] | 294 [AA] | 2709353-2710237 | LQ332_12210 | LysR family transcriptional regulator |
| 4018 | CP088243.1 | UGB19626.1 JB | 960 [NA] | 319 [AA] | 2741050-2742009 | LQ332_12375 | ribose-phosphate diphosphokinase |
| 4019 | CP088243.1 | UGB19627.1 JB | 360 [NA] | 119 [AA] | 2789408-2789767 | LQ332_12605 | 50S ribosomal protein L18 |
| 4020 | CP088243.1 | UGB19628.1 JB | 1023 [NA] | 340 [AA] | 2824521-2825543 | LQ332_12775 | L-threonine 3-dehydrogenase |
| 4021 | CP088243.1 | UGB19629.1 JB | 456 [NA] | 151 [AA] | 2905742-2906197 | LQ332_13150 | hypothetical protein |
| 4022 | CP088243.1 | UGB19630.1 JB | 924 [NA] | 307 [AA] | 2918669-2919592 | LQ332_13215 | DUF58 domain-containing protein |
| 4023 | CP088243.1 | UGB19631.1 JB | 579 [NA] | 192 [AA] | 2945207-2945785 | LQ332_13365 | phage tail protein I |
| 4024 | CP088243.1 | UGB19632.1 JB | 396 [NA] | 131 [AA] | 2955854-2956249 | LQ332_13440 | DUF2946 family protein |
| 4025 | CP088243.1 | UGB19633.1 JB | 975 [NA] | 324 [AA] | 2968751-2969725 | LQ332_13495 | DUF4105 domain-containing protein |
| 4026 | CP088243.1 | UGB19634.1 JB | 1095 [NA] | 364 [AA] | 2978227-2979321 | LQ332_13540 | PilT/PilU family type 4a pilus ATPase |
| 4027 | CP088243.1 | UGB19635.1 JB | 2052 [NA] | 683 [AA] | 3064233-3066284 | LQ332_13980 | glycoside hydrolase family 97 protein |
| 4028 | CP088243.1 | UGB19636.1 JB | 297 [NA] | 98 [AA] | 3085493-3085789 | LQ332_14060 | cytochrome c |
| 4029 | CP088243.1 | UGB19637.1 JB | 867 [NA] | 288 [AA] | 3085820-3086686 | LQ332_14065 | sugar phosphate isomerase/epimerase |
| 4030 | CP088243.1 | UGB19638.1 JB | 468 [NA] | 155 [AA] | 3098045-3098512 | LQ332_14125 | DUF2975 domain-containing protein |
| 4031 | CP088243.1 | UGB19639.1 JB | 1137 [NA] | 378 [AA] | 3100410-3101546 | LQ332_14140 | metallophosphoesterase |
| 4032 | CP088243.1 | UGB19640.1 JB | 636 [NA] | 211 [AA] | 3126887-3127522 | LQ332_14265 | LysE family transporter |
| 4033 | CP088243.1 | UGB19641.1 JB | 1605 [NA] | 534 [AA] | 3164642-3166246 | LQ332_14450 | murein biosynthesis integral membrane protein MurJ |
| 4034 | CP088243.1 | UGB19642.1 JB | 2796 [NA] | 931 [AA] | 3176120-3178915 | LQ332_14495 | TonB-dependent receptor |
| 4035 | CP088243.1 | UGB19643.1 JB | 1512 [NA] | 503 [AA] | 3217372-3218883 | LQ332_14670 | catalase |
| 4036 | CP088243.1 | UGB19644.1 JB | 2556 [NA] | 851 [AA] | 3219208-3221763 | LQ332_14675 | DNA mismatch repair protein MutS |
| 4037 | CP088243.1 | UGB19645.1 JB | 2223 [NA] | 740 [AA] | 3301649-3303871 | LQ332_15095 | methyl-accepting chemotaxis protein |
| 4038 | CP088243.1 | UGB19646.1 JB | 615 [NA] | 204 [AA] | 3311751-3312365 | LQ332_15135 | LysE/ArgO family amino acid transporter |
| 4039 | CP088243.1 | UGB19647.1 JB | 783 [NA] | 260 [AA] | 3312362-3313144 | LQ332_15140 | type I methionyl aminopeptidase |
| 4040 | CP088243.1 | UGB19648.1 JB | 1203 [NA] | 400 [AA] | 3401462-3402664 | LQ332_15540 | lipid-A-disaccharide synthase |
| 4041 | CP088243.1 | UGB19649.1 JB | 216 [NA] | 71 [AA] | 3418125-3418340 | LQ332_15615 | hypothetical protein |
| 4042 | CP088243.1 | UGB19650.1 JB | 585 [NA] | 194 [AA] | 3462533-3463117 | LQ332_15790 | ribonuclease T |
| 4043 | CP088243.1 | UGB19651.1 JB | 1623 [NA] | 540 [AA] | 3495091-3496713 | LQ332_15955 | MASE1 domain-containing protein |
| 4044 | CP088243.1 | UGB19652.1 JB | 1239 [NA] | 412 [AA] | 3496947-3498185 | LQ332_15960 | FAD-binding oxidoreductase |
| 4045 | CP088243.1 | UGB19653.1 JB | 1500 [NA] | 499 [AA] | 3504673-3506172 | LQ332_15990 | efflux transporter outer membrane subunit |
| 4046 | CP088243.1 | UGB19654.1 JB | 1224 [NA] | 407 [AA] | 3511778-3513001 | LQ332_16020 | DUF4105 domain-containing protein |
| 4047 | CP088243.1 | UGB19655.1 JB | 450 [NA] | 149 [AA] | 3547816-3548265 | LQ332_16200 | prepilin-type N-terminal cleavage/methylation domain-containing protein |
| 4048 | CP088243.1 | UGB19656.1 JB | 915 [NA] | 304 [AA] | 3575398-3576312 | LQ332_16370 | ADP-ribosylglycohydrolase family protein |
| 4049 | CP088243.1 | UGB19657.1 JB | 237 [NA] | 78 [AA] | 3581398-3581634 | LQ332_16410 | hypothetical protein |
| 4050 | CP088243.1 | UGB19658.1 JB | 579 [NA] | 192 [AA] | 3600467-3601045 | LQ332_16515 | GNAT family N-acetyltransferase |
| 4051 | CP088243.1 | UGB19659.1 JB | 489 [NA] | 162 [AA] | 3615274-3615762 | LQ332_16595 | hypothetical protein |
| 4052 | CP088243.1 | UGB19660.1 JB | 1683 [NA] | 560 [AA] | 3624554-3626236 | LQ332_16655 | 2-polyprenylphenol 6-hydroxylase |
| 4053 | CP088243.1 | UGB19661.1 JB | 1350 [NA] | 449 [AA] | 3711129-3712478 | LQ332_17070 | metallophosphoesterase family protein |
| 4054 | CP088243.1 | UGB19662.1 JB | 1416 [NA] | 471 [AA] | 3713193-3714608 | LQ332_17080 | DNA photolyase family protein |
| 4055 | CP088243.1 | UGB19663.1 JB | 1089 [NA] | 362 [AA] | 3747748-3748836 | LQ332_17230 | DUF4062 domain-containing protein |
| 4056 | CP088243.1 | UGB19664.1 JB | 336 [NA] | 111 [AA] | 3755857-3756192 | LQ332_17280 | helix-turn-helix domain-containing protein |
| 4057 | CP088243.1 | UGB19665.1 JB | 519 [NA] | 172 [AA] | 3786178-3786696 | LQ332_17435 | RNA polymerase sigma factor |
| 4058 | CP088243.1 | UGB19666.1 JB | 1209 [NA] | 402 [AA] | 3815032-3816240 | LQ332_17555 | 3-oxoadipyl-CoA thiolase |
| 4059 | CP088243.1 | UGB19667.1 JB | 855 [NA] | 284 [AA] | 3820322-3821176 | LQ332_17585 | helix-turn-helix domain-containing protein |
| 4060 | CP088243.1 | UGB19668.1 JB | 3462 [NA] | 1153 [AA] | 3832661-3836122 | LQ332_17635 | efflux RND transporter permease subunit |
| 4061 | CP088243.1 | UGB19669.1 JB | 363 [NA] | 120 [AA] | 3894907-3895269 | LQ332_17915 | DUF3088 domain-containing protein |
| 4062 | CP088243.1 | UGB19670.1 JB | 750 [NA] | 249 [AA] | 3900389-3901138 | LQ332_17945 | amino acid ABC transporter ATP-binding protein |
| 4063 | CP088243.1 | UGB19671.1 JB | 888 [NA] | 295 [AA] | 3914174-3915061 | LQ332_18000 | DMT family transporter |
| 4064 | CP088243.1 | UGB19672.1 JB | 399 [NA] | 132 [AA] | 4039177-4039575 | LQ332_18520 | type II toxin-antitoxin system VapC family toxin |
| 4065 | CP088243.1 | UGB19673.1 JB | 306 [NA] | 101 [AA] | 4051366-4051671 | LQ332_18565 | hypothetical protein |
| 4066 | CP088243.1 | UGB19674.1 JB | 2061 [NA] | 686 [AA] | 4070623-4072683 | LQ332_18655 | flagellar biosynthesis protein FlhA |
| 4067 | CP088243.1 | UGB19675.1 JB | 987 [NA] | 328 [AA] | 4084414-4085400 | LQ332_18725 | flagellar motor switch protein FliG |
| 4068 | CP088243.1 | UGB19676.1 JB | 633 [NA] | 210 [AA] | 4092680-4093312 | LQ332_18765 | response regulator transcription factor |
| 4069 | CP088243.1 | UGB19677.1 JB | 204 [NA] | 67 [AA] | 4199290-4199493 | LQ332_19290 | DUF3330 domain-containing protein |
| 4070 | CP088243.1 | UGB19678.1 JB | 459 [NA] | 152 [AA] | 4205914-4206372 | LQ332_19320 | cyclin-dependent kinase inhibitor 3 family protein |
| 4071 | CP088243.1 | UGB19679.1 JB | 243 [NA] | 80 [AA] | 4210520-4210762 | LQ332_19345 | cation transporter |
| 4072 | CP088243.1 | UGB19680.1 JB | 2136 [NA] | 711 [AA] | 4219807-4221942 | LQ332_19400 | copper-translocating P-type ATPase |
| 4073 | CP088243.1 | UGB19681.1 JB | 1278 [NA] | 425 [AA] | 4239483-4240760 | LQ332_19490 | TolC family protein |
| 4074 | CP088243.1 | UGB19682.1 JB | 624 [NA] | 207 [AA] | 4256283-4256906 | LQ332_19575 | TetR/AcrR family transcriptional regulator |
| 4075 | CP088243.1 | UGB19683.1 JB | 2619 [NA] | 872 [AA] | 4349305-4351923 | LQ332_20030 | glycoside hydrolase family 3 C-terminal domain-containing protein |
| 4076 | CP088243.1 | UGB19684.1 JB | 1695 [NA] | 564 [AA] | 4351998-4353692 | LQ332_20035 | glycoside hydrolase family 43 protein |
| 4077 | CP088243.1 | UGB19685.1 JB | 1533 [NA] | 510 [AA] | 4366181-4367713 | LQ332_20075 | tryptophan 7-halogenase |
| 4078 | CP088243.1 | UGB19686.1 JB | 1122 [NA] | 373 [AA] | 4381505-4382626 | LQ332_20135 | 4-oxalomesaconate tautomerase |
| 4079 | CP088243.1 | UGB19687.1 JB | 915 [NA] | 304 [AA] | 4386667-4387581 | LQ332_20170 | LysR substrate-binding domain-containing protein |
| 4080 | CP088243.1 | UGB19688.1 JB | 405 [NA] | 134 [AA] | 4501930-4502334 | LQ332_20725 | response regulator |
| 4081 | CP088243.1 | UGB19689.1 JB | 1383 [NA] | 460 [AA] | 4539825-4541207 | LQ332_20850 | type II secretion system ATPase GspE |
| 4082 | CP088243.1 | UGB19690.1 JB | 861 [NA] | 286 [AA] | 4545317-4546177 | LQ332_20870 | type II secretion system minor pseudopilin GspK |
| 4083 | CP088243.1 | UGB19691.1 JB | 795 [NA] | 264 [AA] | 4584493-4585287 | LQ332_21045 | helix-turn-helix transcriptional regulator |
| 4084 | CP088243.1 | UGB19692.1 JB | 531 [NA] | 176 [AA] | 4591870-4592400 | LQ332_21085 | nuclear transport factor 2 family protein |
| 4085 | CP088243.1 | UGB19693.1 JB | 1125 [NA] | 374 [AA] | 4611064-4612188 | LQ332_21170 | MFS transporter |
| 4086 | CP088243.1 | UGB19694.1 JB | 1527 [NA] | 508 [AA] | 1128-2654 | LQ332_00015 | thioredoxin family protein |
| 4087 | CP088243.1 | UGB19695.1 JB | 2313 [NA] | 770 [AA] | 11451-13763 | LQ332_00075 | ribonucleoside-diphosphate reductase subunit alpha |
| 4088 | CP088243.1 | UGB19696.1 JB | 1848 [NA] | 615 [AA] | 57883-59730 | LQ332_00260 | amidohydrolase |
| 4089 | CP088243.1 | UGB19697.1 JB | 2190 [NA] | 729 [AA] | 131011-133200 | LQ332_00600 | PAS domain S-box protein |
| 4090 | CP088243.1 | UGB19698.1 JB | 537 [NA] | 178 [AA] | 161365-161901 | LQ332_00750 | hypothetical protein |
| 4091 | CP088243.1 | UGB19699.1 JB | 447 [NA] | 148 [AA] | 176114-176560 | LQ332_00820 | toxin co-regulated pilus biosynthesis Q family protein |
| 4092 | CP088243.1 | UGB19700.1 JB | 2754 [NA] | 917 [AA] | 195765-198518 | LQ332_00925 | UvrD-helicase domain-containing protein |
| 4093 | CP088243.1 | UGB19701.1 JB | 1110 [NA] | 369 [AA] | 198669-199778 | LQ332_00930 | hypothetical protein |
| 4094 | CP088243.1 | UGB19702.1 JB | 1818 [NA] | 605 [AA] | 232293-234110 | LQ332_01095 | M3 family metallopeptidase |
| 4095 | CP088243.1 | UGB19703.1 JB | 2472 [NA] | 823 [AA] | 254342-256813 | LQ332_01180 | NAD-dependent DNA ligase LigA |
| 4096 | CP088243.1 | UGB19704.1 JB | 771 [NA] | 256 [AA] | 331149-331919 | LQ332_01490 | glycine zipper 2TM domain-containing protein |
| 4097 | CP088243.1 | UGB19705.1 JB | 300 [NA] | 99 [AA] | 378445-378744 | LQ332_01715 | YciI family protein |
| 4098 | CP088243.1 | UGB19706.1 JB | 1251 [NA] | 416 [AA] | 406855-408105 | LQ332_01860 | poly-beta-1,6 N-acetyl-D-glucosamine synthase |
| 4099 | CP088243.1 | UGB19707.1 JB | 198 [NA] | 65 [AA] | 425368-425565 | LQ332_01945 | membrane protein insertion efficiency factor YidD |
| 4100 | CP088243.1 | UGB19708.1 JB | 486 [NA] | 161 [AA] | 459835-460320 | LQ332_02100 | hypothetical protein |
| 4101 | CP088243.1 | UGB19709.1 JB | 1908 [NA] | 635 [AA] | 467998-469905 | LQ332_02150 | 1-deoxy-D-xylulose-5-phosphate synthase |
| 4102 | CP088243.1 | UGB19710.1 JB | 357 [NA] | 118 [AA] | 512989-513345 | LQ332_02395 | NADH-quinone oxidoreductase subunit A |
| 4103 | CP088243.1 | UGB19711.1 JB | 405 [NA] | 134 [AA] | 613033-613437 | LQ332_02835 | VOC family protein |
| 4104 | CP088243.1 | UGB19712.1 JB | 591 [NA] | 196 [AA] | 616593-617183 | LQ332_02850 | HAD-IB family hydrolase |
| 4105 | CP088243.1 | UGB19713.1 JB | 1320 [NA] | 439 [AA] | 620877-622196 | LQ332_02870 | virulence factor family protein |
| 4106 | CP088243.1 | UGB19714.1 JB | 249 [NA] | 82 [AA] | 627276-627524 | LQ332_02905 | YkgJ family cysteine cluster protein |
| 4107 | CP088243.1 | UGB19715.1 JB | 1794 [NA] | 597 [AA] | 662907-664700 | LQ332_03095 | translation elongation factor 4 |
| 4108 | CP088243.1 | UGB19716.1 JB | 864 [NA] | 287 [AA] | 670931-671794 | LQ332_03120 | pirin family protein |
| 4109 | CP088243.1 | UGB19717.1 JB | 714 [NA] | 237 [AA] | 671922-672635 | LQ332_03125 | aquaporin Z |
| 4110 | CP088243.1 | UGB19718.1 JB | 1227 [NA] | 408 [AA] | 689701-690927 | LQ332_03195 | multidrug effflux MFS transporter |
| 4111 | CP088243.1 | UGB19719.1 JB | 195 [NA] | 64 [AA] | 2365725-2365919 | LQ332_10700 | hypothetical protein |
| 4112 | CP088243.1 | UGB19720.1 JB | 339 [NA] | 112 [AA] | 2898937-2899275 | LQ332_13120 | hypothetical protein |
| 4113 | CP088243.1 | UGB19721.1 JB | 183 [NA] | 60 [AA] | 4016224-4016406 | LQ332_18440 | hypothetical protein |