Genome Explorer: Stenotrophomonas maltophilia NCTC10259 (SEQF4385.1)
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NCBI Annotation for SEQF4385.1
| Genome selected: Stenotrophomonas maltophilia NCTC10259 | |||
| Contigs: | 1 | Bases: | 4563878 bps |
| CDS: | 4104 | rRNA: | 13 |
| tmRNA: | 1 | tRNA: | 78 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 4001 | LR134324.1 | VEF38998.1 JB | 852 [NA] | 283 [AA] | 4442720-4443571 | NCTC10259_04117 | DNA binding protein HpkR |
| 4002 | LR134324.1 | VEF38999.1 JB | 921 [NA] | 306 [AA] | 4443659-4444579 | NCTC10259_04118 | peptidase M14 carboxypeptidase A |
| 4003 | LR134324.1 | VEF39000.1 JB | 2082 [NA] | 693 [AA] | 4444711-4446792 | NCTC10259_04119 | Iron(III) dicitrate transport protein FecA |
| 4004 | LR134324.1 | VEF39001.1 JB | 1797 [NA] | 598 [AA] | 4446831-4448627 | NCTC10259_04120 | chloride channel protein |
| 4005 | LR134324.1 | VEF39002.1 JB | 717 [NA] | 238 [AA] | 4448729-4449445 | NCTC10259_04121 | MgtC/SapB transporter |
| 4006 | LR134324.1 | VEF39003.1 JB | 408 [NA] | 135 [AA] | 4449519-4449926 | NCTC10259_04122 | merR family transcriptional regulator |
| 4007 | LR134324.1 | VEF39004.1 JB | 828 [NA] | 275 [AA] | 4449990-4450817 | NCTC10259_04123 | methyltransferase |
| 4008 | LR134324.1 | VEF39005.1 JB | 291 [NA] | 96 [AA] | 4450898-4451188 | NCTC10259_04124 | Uncharacterised protein |
| 4009 | LR134324.1 | VEF39006.1 JB | 843 [NA] | 280 [AA] | 4451310-4452152 | NCTC10259_04125 | OmpA family protein |
| 4010 | LR134324.1 | VEF39007.1 JB | 5748 [NA] | 1915 [AA] | 4452214-4457961 | NCTC10259_04126 | YadA domain-containing protein |
| 4011 | LR134324.1 | VEF39008.1 JB | 981 [NA] | 326 [AA] | 4458197-4459177 | NCTC10259_04127 | AraC family transcriptional regulator |
| 4012 | LR134324.1 | VEF39009.1 JB | 189 [NA] | 62 [AA] | 4459871-4460059 | NCTC10259_04128 | pilin subunit |
| 4013 | LR134324.1 | VEF39010.1 JB | 546 [NA] | 181 [AA] | 4460149-4460694 | NCTC10259_04129 | prepilin peptidase transmembrane protein |
| 4014 | LR134324.1 | VEF39011.1 JB | 477 [NA] | 158 [AA] | 4460691-4461167 | NCTC10259_04130 | flp pilus assembly protein TadG |
| 4015 | LR134324.1 | VEF39012.1 JB | 1035 [NA] | 344 [AA] | 4461193-4462227 | NCTC10259_04131 | flp pilus assembly protein RcpC/CpaB |
| 4016 | LR134324.1 | VEF39013.1 JB | 1359 [NA] | 452 [AA] | 4462246-4463604 | NCTC10259_04132 | type II and III secretion system protein |
| 4017 | LR134324.1 | VEF39014.1 JB | 1212 [NA] | 403 [AA] | 4463677-4464888 | NCTC10259_04133 | fimbriae assembly protein |
| 4018 | LR134324.1 | VEF39015.1 JB | 1350 [NA] | 449 [AA] | 4464873-4466222 | NCTC10259_04134 | type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily |
| 4019 | LR134324.1 | VEF39016.1 JB | 957 [NA] | 318 [AA] | 4466225-4467181 | NCTC10259_04135 | flp pilus assembly protein TadB |
| 4020 | LR134324.1 | VEF39017.1 JB | 936 [NA] | 311 [AA] | 4467210-4468145 | NCTC10259_04136 | type II secretion system protein |
| 4021 | LR134324.1 | VEF39018.1 JB | 891 [NA] | 296 [AA] | 4468145-4469035 | NCTC10259_04137 | flp pilus assembly protein TadD, contains TPR repeats |
| 4022 | LR134324.1 | VEF39019.1 JB | 462 [NA] | 153 [AA] | 4469032-4469493 | NCTC10259_04138 | Protein of uncharacterised function (DUF3613) |
| 4023 | LR134324.1 | VEF39020.1 JB | 2151 [NA] | 716 [AA] | 4469502-4471652 | NCTC10259_04139 | Predicted membrane protein |
| 4024 | LR134324.1 | VEF39021.1 JB | 711 [NA] | 236 [AA] | 4471758-4472468 | NCTC10259_04140 | lipoprotein |
| 4025 | LR134324.1 | VEF39022.1 JB | 387 [NA] | 128 [AA] | 4472544-4472930 | NCTC10259_04141 | Uncharacterised protein |
| 4026 | LR134324.1 | VEF39023.1 JB | 825 [NA] | 274 [AA] | 4473117-4473941 | NCTC10259_04142 | non-heme chloroperoxidase |
| 4027 | LR134324.1 | VEF39024.1 JB | 1647 [NA] | 548 [AA] | 4474055-4475701 | NCTC10259_04143 | major facilitator superfamily transmembrane transporter |
| 4028 | LR134324.1 | VEF39025.1 JB | 1284 [NA] | 427 [AA] | 4475695-4476978 | NCTC10259_04144 | Uncharacterised protein |
| 4029 | LR134324.1 | VEF39026.1 JB | 1971 [NA] | 656 [AA] | 4476957-4478927 | NCTC10259_04145 | exoenzymes regulatory protein AepA precursor |
| 4030 | LR134324.1 | VEF39027.1 JB | 432 [NA] | 143 [AA] | 4478924-4479355 | NCTC10259_04146 | membrane protein |
| 4031 | LR134324.1 | VEF39028.1 JB | 657 [NA] | 218 [AA] | 4479358-4480014 | NCTC10259_04147 | Amidases related to nicotinamidase |
| 4032 | LR134324.1 | VEF39029.1 JB | 417 [NA] | 138 [AA] | 4480011-4480427 | NCTC10259_04148 | AraC family transcriptional regulator |
| 4033 | LR134324.1 | VEF39030.1 JB | 333 [NA] | 110 [AA] | 4480505-4480837 | NCTC10259_04149 | transmembrane protein |
| 4034 | LR134324.1 | VEF39031.1 JB | 3021 [NA] | 1006 [AA] | 4480943-4483963 | NCTC10259_04150 | signal transduction histidine kinase |
| 4035 | LR134324.1 | VEF39032.1 JB | 654 [NA] | 217 [AA] | 4483956-4484609 | NCTC10259_04151 | two-component system regulatory protein |
| 4036 | LR134324.1 | VEF39033.1 JB | 1191 [NA] | 396 [AA] | 4485008-4486198 | NCTC10259_04152 | major facilitator superfamily permease |
| 4037 | LR134324.1 | VEF39034.1 JB | 930 [NA] | 309 [AA] | 4486292-4487221 | NCTC10259_04153 | LysR family transcriptional regulator |
| 4038 | LR134324.1 | VEF39035.1 JB | 1458 [NA] | 485 [AA] | 4487315-4488772 | NCTC10259_04154 | amidohydrolase |
| 4039 | LR134324.1 | VEF39036.1 JB | 702 [NA] | 233 [AA] | 4488824-4489525 | NCTC10259_04155 | ankyrin |
| 4040 | LR134324.1 | VEF39037.1 JB | 882 [NA] | 293 [AA] | 4489648-4490529 | NCTC10259_04156 | LysR family transcriptional regulator |
| 4041 | LR134324.1 | VEF39038.1 JB | 438 [NA] | 145 [AA] | 4490738-4491175 | NCTC10259_04157 | Domain of uncharacterised function (DUF3806) |
| 4042 | LR134324.1 | VEF39039.1 JB | 1161 [NA] | 386 [AA] | 4491253-4492413 | NCTC10259_04158 | cytosine deaminase |
| 4043 | LR134324.1 | VEF39040.1 JB | 642 [NA] | 213 [AA] | 4492598-4493239 | NCTC10259_04159 | Uncharacterised protein |
| 4044 | LR134324.1 | VEF39041.1 JB | 2727 [NA] | 908 [AA] | 4493320-4496046 | NCTC10259_04160 | TonB-dependent receptor |
| 4045 | LR134324.1 | VEF39042.1 JB | 636 [NA] | 211 [AA] | 4496226-4496861 | NCTC10259_04161 | Uncharacterised protein |
| 4046 | LR134324.1 | VEF39043.1 JB | 780 [NA] | 259 [AA] | 4496858-4497637 | NCTC10259_04162 | CDP-diacylglycerol diphosphatase |
| 4047 | LR134324.1 | VEF39044.1 JB | 660 [NA] | 219 [AA] | 4497706-4498365 | NCTC10259_04163 | decarboxylase |
| 4048 | LR134324.1 | VEF39045.1 JB | 297 [NA] | 98 [AA] | 4498535-4498831 | NCTC10259_04164 | lipoprotein |
| 4049 | LR134324.1 | VEF39046.1 JB | 885 [NA] | 294 [AA] | 4498901-4499785 | NCTC10259_04165 | Uncharacterised protein |
| 4050 | LR134324.1 | VEF39047.1 JB | 1701 [NA] | 566 [AA] | 4499897-4501597 | NCTC10259_04166 | D-lactate dehydrogenase |
| 4051 | LR134324.1 | VEF39048.1 JB | 1140 [NA] | 379 [AA] | 4501594-4502733 | NCTC10259_04167 | L-lactate dehydrogenase |
| 4052 | LR134324.1 | VEF39049.1 JB | 765 [NA] | 254 [AA] | 4502738-4503502 | NCTC10259_04168 | Lactate-responsive regulator LldR in Enterobacteria, GntR family |
| 4053 | LR134324.1 | VEF39050.1 JB | 1659 [NA] | 552 [AA] | 4503556-4505214 | NCTC10259_04169 | L-lactate permease |
| 4054 | LR134324.1 | VEF39051.1 JB | 453 [NA] | 150 [AA] | 4505438-4505890 | NCTC10259_04170 | MgtC/SapB transporter |
| 4055 | LR134324.1 | VEF39052.1 JB | 759 [NA] | 252 [AA] | 4506020-4506778 | NCTC10259_04171 | 3-oxoacyl-ACP reductase |
| 4056 | LR134324.1 | VEF39053.1 JB | 954 [NA] | 317 [AA] | 4507173-4508126 | NCTC10259_04172 | AraC family transcriptional regulator |
| 4057 | LR134324.1 | VEF39054.1 JB | 1911 [NA] | 636 [AA] | 4508558-4510468 | NCTC10259_04173 | X-Pro dipeptidyl-peptidase domain-containing protein |
| 4058 | LR134324.1 | VEF39055.1 JB | 387 [NA] | 128 [AA] | 4510685-4511071 | NCTC10259_04174 | Uncharacterized protein conserved in bacteria |
| 4059 | LR134324.1 | VEF39056.1 JB | 1359 [NA] | 452 [AA] | 4511071-4512429 | NCTC10259_04175 | major facilitator superfamily protein |
| 4060 | LR134324.1 | VEF39057.1 JB | 897 [NA] | 298 [AA] | 4512535-4513431 | NCTC10259_04176 | LysR family transcriptional regulator |
| 4061 | LR134324.1 | VEF39058.1 JB | 2796 [NA] | 931 [AA] | 4513530-4516325 | NCTC10259_04177 | beta-D-glucosidase |
| 4062 | LR134324.1 | VEF39059.1 JB | 435 [NA] | 144 [AA] | 4516663-4517097 | NCTC10259_04178 | Lactoylglutathione lyase and related lyases |
| 4063 | LR134324.1 | VEF39060.1 JB | 705 [NA] | 234 [AA] | 4517281-4517985 | NCTC10259_04179 | AraC family transcriptional regulator |
| 4064 | LR134324.1 | VEF39061.1 JB | 891 [NA] | 296 [AA] | 4517995-4518885 | NCTC10259_04180 | Sterol desaturase |
| 4065 | LR134324.1 | VEF39062.1 JB | 1056 [NA] | 351 [AA] | 4518913-4519968 | NCTC10259_04181 | LysR family transcriptional regulator |
| 4066 | LR134324.1 | VEF39063.1 JB | 651 [NA] | 216 [AA] | 4520061-4520711 | NCTC10259_04182 | DSBA oxidoreductase |
| 4067 | LR134324.1 | VEF39064.1 JB | 1008 [NA] | 335 [AA] | 4520747-4521754 | NCTC10259_04183 | cyclase family protein |
| 4068 | LR134324.1 | VEF39065.1 JB | 615 [NA] | 204 [AA] | 4521974-4522588 | NCTC10259_04184 | recombinase A |
| 4069 | LR134324.1 | VEF39066.1 JB | 1410 [NA] | 469 [AA] | 4522598-4524007 | NCTC10259_04185 | DNA polymerase-like protein PA0670 |
| 4070 | LR134324.1 | VEF39067.1 JB | 3111 [NA] | 1036 [AA] | 4524014-4527124 | NCTC10259_04186 | DNA polymerase III subunit alpha |
| 4071 | LR134324.1 | VEF39068.1 JB | 507 [NA] | 168 [AA] | 4527206-4527712 | NCTC10259_04187 | Uncharacterised protein |
| 4072 | LR134324.1 | VEF39069.1 JB | 1287 [NA] | 428 [AA] | 4527815-4529101 | NCTC10259_04188 | GntR family transcriptional regulator |
| 4073 | LR134324.1 | VEF39070.1 JB | 774 [NA] | 257 [AA] | 4529178-4529951 | NCTC10259_04189 | racemase |
| 4074 | LR134324.1 | VEF39071.1 JB | 702 [NA] | 233 [AA] | 4529948-4530649 | NCTC10259_04190 | glutamine amidotransferase |
| 4075 | LR134324.1 | VEF39072.1 JB | 225 [NA] | 74 [AA] | 4530646-4530870 | NCTC10259_04191 | Uncharacterised protein |
| 4076 | LR134324.1 | VEF39073.1 JB | 507 [NA] | 168 [AA] | 4530969-4531475 | NCTC10259_04192 | Uncharacterised protein |
| 4077 | LR134324.1 | VEF39074.1 JB | 510 [NA] | 169 [AA] | 4531599-4532108 | NCTC10259_04193 | ECF subfamily RNA polymerase sigma-70 factor |
| 4078 | LR134324.1 | VEF39075.1 JB | 927 [NA] | 308 [AA] | 4532105-4533031 | NCTC10259_04194 | FecR protein |
| 4079 | LR134324.1 | VEF39076.1 JB | 2547 [NA] | 848 [AA] | 4533021-4535567 | NCTC10259_04195 | TonB dependent receptor protein |
| 4080 | LR134324.1 | VEF39077.1 JB | 801 [NA] | 266 [AA] | 4535554-4536354 | NCTC10259_04196 | lipoprotein |
| 4081 | LR134324.1 | VEF39078.1 JB | 750 [NA] | 249 [AA] | 4536311-4537060 | NCTC10259_04197 | TonB-like protein |
| 4082 | LR134324.1 | VEF39079.1 JB | 435 [NA] | 144 [AA] | 4537057-4537491 | NCTC10259_04198 | translation initiation inhibitor |
| 4083 | LR134324.1 | VEF39080.1 JB | 903 [NA] | 300 [AA] | 4537677-4538579 | NCTC10259_04199 | Cobalt-zinc-cadmium resistance protein |
| 4084 | LR134324.1 | VEF39081.1 JB | 2289 [NA] | 762 [AA] | 4538608-4540896 | NCTC10259_04200 | Lysine decarboxylase 2, constitutive |
| 4085 | LR134324.1 | VEF39082.1 JB | 1359 [NA] | 452 [AA] | 4540917-4542275 | NCTC10259_04201 | arginine:agmatin antiporter |
| 4086 | LR134324.1 | VEF39083.1 JB | 1434 [NA] | 477 [AA] | 4542352-4543785 | NCTC10259_04202 | porin |
| 4087 | LR134324.1 | VEF39084.1 JB | 843 [NA] | 280 [AA] | 4544311-4545153 | NCTC10259_04203 | Thiol:disulfide interchange protein DsbG precursor |
| 4088 | LR134324.1 | VEF39085.1 JB | 780 [NA] | 259 [AA] | 4545184-4545963 | NCTC10259_04204 | redoxin domain-containing protein |
| 4089 | LR134324.1 | VEF39086.1 JB | 1068 [NA] | 355 [AA] | 4546069-4547136 | NCTC10259_04205 | AraC family transcriptional regulator |
| 4090 | LR134324.1 | VEF39087.1 JB | 399 [NA] | 132 [AA] | 4547323-4547721 | NCTC10259_04206 | MerR family Zn(II)-responsive regulator |
| 4091 | LR134324.1 | VEF39088.1 JB | 417 [NA] | 138 [AA] | 4548736-4549152 | NCTC10259_04213 | AttT protein |
| 4092 | LR134324.1 | VEF39089.1 JB | 957 [NA] | 318 [AA] | 4549229-4550185 | NCTC10259_04214 | Uncharacterised ACR, COG2135 |
| 4093 | LR134324.1 | VEF39090.1 JB | 381 [NA] | 126 [AA] | 4550309-4550689 | NCTC10259_04215 | two-component system regulatory protein |
| 4094 | LR134324.1 | VEF39091.1 JB | 1440 [NA] | 479 [AA] | 4551213-4552652 | NCTC10259_04217 | diguanylate cyclase |
| 4095 | LR134324.1 | VEF39092.1 JB | 1827 [NA] | 608 [AA] | 4552649-4554475 | NCTC10259_04218 | methyl-accepting chemotaxis protein |
| 4096 | LR134324.1 | VEF39093.1 JB | 1089 [NA] | 362 [AA] | 4555056-4556144 | NCTC10259_04219 | Uncharacterised protein |
| 4097 | LR134324.1 | VEF39094.1 JB | 291 [NA] | 96 [AA] | 4556207-4556497 | NCTC10259_04220 | antibiotic monooxygenase biosynthesis protein |
| 4098 | LR134324.1 | VEF39095.1 JB | 303 [NA] | 100 [AA] | 4556439-4556741 | NCTC10259_04221 | transmembrane protein |
| 4099 | LR134324.1 | VEF39096.1 JB | 2190 [NA] | 729 [AA] | 4556804-4558993 | NCTC10259_04222 | GGDEF PAS signalling domain-containing protein |
| 4100 | LR134324.1 | VEF39097.1 JB | 1731 [NA] | 576 [AA] | 4559201-4560931 | NCTC10259_04223 | transcription accessory protein |
| 4101 | LR134324.1 | VEF39098.1 JB | 216 [NA] | 71 [AA] | 4561798-4562013 | NCTC10259_04224 | Uncharacterised protein |
| 4102 | LR134324.1 | VEF39099.1 JB | 453 [NA] | 150 [AA] | 4562846-4563298 | NCTC10259_04225 | Uncharacterised protein |
| 4103 | LR134324.1 | VEF39100.1 JB | 204 [NA] | 67 [AA] | 4563295-4563498 | NCTC10259_04226 | stress-responsive transcriptional regulator |
| 4104 | LR134324.1 | VEF39101.1 JB | 273 [NA] | 90 [AA] | 4563563-4563835 | NCTC10259_04227 | Uncharacterised protein |