Genome Explorer: Stenotrophomonas maltophilia 2013-SM13 (SEQF4390.1)
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NCBI Annotation for SEQF4390.1
| Genome selected: Stenotrophomonas maltophilia 2013-SM13 | |||
| Contigs: | 1 | Bases: | 4613698 bps |
| CDS: | 33 | rRNA: | 12 |
| tmRNA: | 1 | tRNA: | 74 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 4001 | CP088242.1 | UGB51525.1 JB | 960 [NA] | 319 [AA] | 1595459-1596418 | LQ330_07275 | ribose-phosphate diphosphokinase |
| 4002 | CP088242.1 | UGB51526.1 JB | 360 [NA] | 119 [AA] | 1643817-1644176 | LQ330_07505 | 50S ribosomal protein L18 |
| 4003 | CP088242.1 | UGB51527.1 JB | 1023 [NA] | 340 [AA] | 1678930-1679952 | LQ330_07675 | L-threonine 3-dehydrogenase |
| 4004 | CP088242.1 | UGB51528.1 JB | 456 [NA] | 151 [AA] | 1760150-1760605 | LQ330_08050 | hypothetical protein |
| 4005 | CP088242.1 | UGB51529.1 JB | 924 [NA] | 307 [AA] | 1773077-1774000 | LQ330_08115 | DUF58 domain-containing protein |
| 4006 | CP088242.1 | UGB51530.1 JB | 579 [NA] | 192 [AA] | 1799615-1800193 | LQ330_08265 | phage tail protein I |
| 4007 | CP088242.1 | UGB51531.1 JB | 396 [NA] | 131 [AA] | 1810262-1810657 | LQ330_08340 | DUF2946 family protein |
| 4008 | CP088242.1 | UGB51532.1 JB | 975 [NA] | 324 [AA] | 1823159-1824133 | LQ330_08395 | DUF4105 domain-containing protein |
| 4009 | CP088242.1 | UGB51533.1 JB | 1095 [NA] | 364 [AA] | 1832635-1833729 | LQ330_08440 | PilT/PilU family type 4a pilus ATPase |
| 4010 | CP088242.1 | UGB51534.1 JB | 2052 [NA] | 683 [AA] | 1918641-1920692 | LQ330_08880 | glycoside hydrolase family 97 protein |
| 4011 | CP088242.1 | UGB51535.1 JB | 297 [NA] | 98 [AA] | 1939901-1940197 | LQ330_08960 | cytochrome c |
| 4012 | CP088242.1 | UGB51536.1 JB | 867 [NA] | 288 [AA] | 1940228-1941094 | LQ330_08965 | sugar phosphate isomerase/epimerase |
| 4013 | CP088242.1 | UGB51537.1 JB | 468 [NA] | 155 [AA] | 1952453-1952920 | LQ330_09025 | DUF2975 domain-containing protein |
| 4014 | CP088242.1 | UGB51538.1 JB | 1137 [NA] | 378 [AA] | 1954818-1955954 | LQ330_09040 | metallophosphoesterase |
| 4015 | CP088242.1 | UGB51539.1 JB | 636 [NA] | 211 [AA] | 1981295-1981930 | LQ330_09165 | LysE family transporter |
| 4016 | CP088242.1 | UGB51540.1 JB | 1605 [NA] | 534 [AA] | 2019050-2020654 | LQ330_09350 | murein biosynthesis integral membrane protein MurJ |
| 4017 | CP088242.1 | UGB51541.1 JB | 2796 [NA] | 931 [AA] | 2030528-2033323 | LQ330_09395 | TonB-dependent receptor |
| 4018 | CP088242.1 | UGB51542.1 JB | 1512 [NA] | 503 [AA] | 2071780-2073291 | LQ330_09570 | catalase |
| 4019 | CP088242.1 | UGB51543.1 JB | 2556 [NA] | 851 [AA] | 2073616-2076171 | LQ330_09575 | DNA mismatch repair protein MutS |
| 4020 | CP088242.1 | UGB51544.1 JB | 2223 [NA] | 740 [AA] | 2156057-2158279 | LQ330_09995 | methyl-accepting chemotaxis protein |
| 4021 | CP088242.1 | UGB51545.1 JB | 615 [NA] | 204 [AA] | 2166159-2166773 | LQ330_10035 | LysE/ArgO family amino acid transporter |
| 4022 | CP088242.1 | UGB51546.1 JB | 783 [NA] | 260 [AA] | 2166770-2167552 | LQ330_10040 | type I methionyl aminopeptidase |
| 4023 | CP088242.1 | UGB51547.1 JB | 1203 [NA] | 400 [AA] | 2255870-2257072 | LQ330_10440 | lipid-A-disaccharide synthase |
| 4024 | CP088242.1 | UGB51548.1 JB | 216 [NA] | 71 [AA] | 2272533-2272748 | LQ330_10515 | hypothetical protein |
| 4025 | CP088242.1 | UGB51549.1 JB | 585 [NA] | 194 [AA] | 2316941-2317525 | LQ330_10690 | ribonuclease T |
| 4026 | CP088242.1 | UGB51550.1 JB | 1623 [NA] | 540 [AA] | 2349499-2351121 | LQ330_10855 | MASE1 domain-containing protein |
| 4027 | CP088242.1 | UGB51551.1 JB | 1239 [NA] | 412 [AA] | 2351355-2352593 | LQ330_10860 | FAD-binding oxidoreductase |
| 4028 | CP088242.1 | UGB51552.1 JB | 1500 [NA] | 499 [AA] | 2359081-2360580 | LQ330_10890 | efflux transporter outer membrane subunit |
| 4029 | CP088242.1 | UGB51553.1 JB | 1224 [NA] | 407 [AA] | 2366186-2367409 | LQ330_10920 | DUF4105 domain-containing protein |
| 4030 | CP088242.1 | UGB51554.1 JB | 450 [NA] | 149 [AA] | 2402224-2402673 | LQ330_11100 | prepilin-type N-terminal cleavage/methylation domain-containing protein |
| 4031 | CP088242.1 | UGB51555.1 JB | 915 [NA] | 304 [AA] | 2429806-2430720 | LQ330_11270 | ADP-ribosylglycohydrolase family protein |
| 4032 | CP088242.1 | UGB51556.1 JB | 237 [NA] | 78 [AA] | 2435806-2436042 | LQ330_11310 | hypothetical protein |
| 4033 | CP088242.1 | UGB51557.1 JB | 579 [NA] | 192 [AA] | 2454875-2455453 | LQ330_11415 | GNAT family N-acetyltransferase |
| 4034 | CP088242.1 | UGB51558.1 JB | 489 [NA] | 162 [AA] | 2469682-2470170 | LQ330_11495 | hypothetical protein |
| 4035 | CP088242.1 | UGB51559.1 JB | 1683 [NA] | 560 [AA] | 2478962-2480644 | LQ330_11555 | 2-polyprenylphenol 6-hydroxylase |
| 4036 | CP088242.1 | UGB51560.1 JB | 1350 [NA] | 449 [AA] | 2565537-2566886 | LQ330_11970 | metallophosphoesterase family protein |
| 4037 | CP088242.1 | UGB51561.1 JB | 1416 [NA] | 471 [AA] | 2567601-2569016 | LQ330_11980 | DNA photolyase family protein |
| 4038 | CP088242.1 | UGB51562.1 JB | 1089 [NA] | 362 [AA] | 2602156-2603244 | LQ330_12130 | DUF4062 domain-containing protein |
| 4039 | CP088242.1 | UGB51563.1 JB | 336 [NA] | 111 [AA] | 2610265-2610600 | LQ330_12180 | helix-turn-helix domain-containing protein |
| 4040 | CP088242.1 | UGB51564.1 JB | 519 [NA] | 172 [AA] | 2640586-2641104 | LQ330_12335 | RNA polymerase sigma factor |
| 4041 | CP088242.1 | UGB51565.1 JB | 1209 [NA] | 402 [AA] | 2669440-2670648 | LQ330_12455 | 3-oxoadipyl-CoA thiolase |
| 4042 | CP088242.1 | UGB51566.1 JB | 855 [NA] | 284 [AA] | 2674730-2675584 | LQ330_12485 | helix-turn-helix domain-containing protein |
| 4043 | CP088242.1 | UGB51567.1 JB | 3462 [NA] | 1153 [AA] | 2687069-2690530 | LQ330_12535 | efflux RND transporter permease subunit |
| 4044 | CP088242.1 | UGB51568.1 JB | 363 [NA] | 120 [AA] | 2749316-2749678 | LQ330_12815 | DUF3088 domain-containing protein |
| 4045 | CP088242.1 | UGB51569.1 JB | 750 [NA] | 249 [AA] | 2754798-2755547 | LQ330_12845 | amino acid ABC transporter ATP-binding protein |
| 4046 | CP088242.1 | UGB51570.1 JB | 888 [NA] | 295 [AA] | 2768583-2769470 | LQ330_12900 | DMT family transporter |
| 4047 | CP088242.1 | UGB51571.1 JB | 1758 [NA] | 585 [AA] | 2865675-2867432 | LQ330_13330 | single-stranded-DNA-specific exonuclease RecJ |
| 4048 | CP088242.1 | UGB51572.1 JB | 399 [NA] | 132 [AA] | 2893586-2893984 | LQ330_13420 | type II toxin-antitoxin system VapC family toxin |
| 4049 | CP088242.1 | UGB51573.1 JB | 306 [NA] | 101 [AA] | 2905775-2906080 | LQ330_13465 | hypothetical protein |
| 4050 | CP088242.1 | UGB51574.1 JB | 2061 [NA] | 686 [AA] | 2925032-2927092 | LQ330_13555 | flagellar biosynthesis protein FlhA |
| 4051 | CP088242.1 | UGB51575.1 JB | 987 [NA] | 328 [AA] | 2938823-2939809 | LQ330_13625 | flagellar motor switch protein FliG |
| 4052 | CP088242.1 | UGB51576.1 JB | 633 [NA] | 210 [AA] | 2947089-2947721 | LQ330_13665 | response regulator transcription factor |
| 4053 | CP088242.1 | UGB51577.1 JB | 204 [NA] | 67 [AA] | 3053701-3053904 | LQ330_14190 | DUF3330 domain-containing protein |
| 4054 | CP088242.1 | UGB51578.1 JB | 459 [NA] | 152 [AA] | 3060325-3060783 | LQ330_14220 | cyclin-dependent kinase inhibitor 3 family protein |
| 4055 | CP088242.1 | UGB51579.1 JB | 243 [NA] | 80 [AA] | 3064931-3065173 | LQ330_14245 | cation transporter |
| 4056 | CP088242.1 | UGB51580.1 JB | 2136 [NA] | 711 [AA] | 3074218-3076353 | LQ330_14300 | copper-translocating P-type ATPase |
| 4057 | CP088242.1 | UGB51581.1 JB | 1278 [NA] | 425 [AA] | 3093894-3095171 | LQ330_14390 | TolC family protein |
| 4058 | CP088242.1 | UGB51582.1 JB | 624 [NA] | 207 [AA] | 3110694-3111317 | LQ330_14475 | TetR/AcrR family transcriptional regulator |
| 4059 | CP088242.1 | UGB51583.1 JB | 2619 [NA] | 872 [AA] | 3203716-3206334 | LQ330_14930 | glycoside hydrolase family 3 C-terminal domain-containing protein |
| 4060 | CP088242.1 | UGB51584.1 JB | 1695 [NA] | 564 [AA] | 3206409-3208103 | LQ330_14935 | glycoside hydrolase family 43 protein |
| 4061 | CP088242.1 | UGB51585.1 JB | 1533 [NA] | 510 [AA] | 3220592-3222124 | LQ330_14975 | tryptophan 7-halogenase |
| 4062 | CP088242.1 | UGB51586.1 JB | 1122 [NA] | 373 [AA] | 3235916-3237037 | LQ330_15035 | 4-oxalomesaconate tautomerase |
| 4063 | CP088242.1 | UGB51587.1 JB | 915 [NA] | 304 [AA] | 3241078-3241992 | LQ330_15070 | LysR substrate-binding domain-containing protein |
| 4064 | CP088242.1 | UGB51588.1 JB | 405 [NA] | 134 [AA] | 3356340-3356744 | LQ330_15625 | response regulator |
| 4065 | CP088242.1 | UGB51589.1 JB | 1383 [NA] | 460 [AA] | 3394235-3395617 | LQ330_15750 | type II secretion system ATPase GspE |
| 4066 | CP088242.1 | UGB51590.1 JB | 861 [NA] | 286 [AA] | 3399727-3400587 | LQ330_15770 | type II secretion system minor pseudopilin GspK |
| 4067 | CP088242.1 | UGB51591.1 JB | 795 [NA] | 264 [AA] | 3438903-3439697 | LQ330_15945 | helix-turn-helix transcriptional regulator |
| 4068 | CP088242.1 | UGB51592.1 JB | 531 [NA] | 176 [AA] | 3446280-3446810 | LQ330_15985 | nuclear transport factor 2 family protein |
| 4069 | CP088242.1 | UGB51593.1 JB | 1527 [NA] | 508 [AA] | 3468805-3470331 | LQ330_16090 | thioredoxin family protein |
| 4070 | CP088242.1 | UGB51594.1 JB | 2313 [NA] | 770 [AA] | 3479128-3481440 | LQ330_16150 | ribonucleoside-diphosphate reductase subunit alpha |
| 4071 | CP088242.1 | UGB51595.1 JB | 1848 [NA] | 615 [AA] | 3525560-3527407 | LQ330_16335 | amidohydrolase |
| 4072 | CP088242.1 | UGB51596.1 JB | 2190 [NA] | 729 [AA] | 3598688-3600877 | LQ330_16675 | PAS domain S-box protein |
| 4073 | CP088242.1 | UGB51597.1 JB | 537 [NA] | 178 [AA] | 3629042-3629578 | LQ330_16825 | hypothetical protein |
| 4074 | CP088242.1 | UGB51598.1 JB | 447 [NA] | 148 [AA] | 3643791-3644237 | LQ330_16895 | toxin co-regulated pilus biosynthesis Q family protein |
| 4075 | CP088242.1 | UGB51599.1 JB | 2754 [NA] | 917 [AA] | 3663442-3666195 | LQ330_17000 | UvrD-helicase domain-containing protein |
| 4076 | CP088242.1 | UGB51600.1 JB | 1110 [NA] | 369 [AA] | 3666346-3667455 | LQ330_17005 | hypothetical protein |
| 4077 | CP088242.1 | UGB51601.1 JB | 1818 [NA] | 605 [AA] | 3699968-3701785 | LQ330_17170 | M3 family metallopeptidase |
| 4078 | CP088242.1 | UGB51602.1 JB | 2472 [NA] | 823 [AA] | 3722017-3724488 | LQ330_17255 | NAD-dependent DNA ligase LigA |
| 4079 | CP088242.1 | UGB51603.1 JB | 657 [NA] | 218 [AA] | 3750049-3750705 | LQ330_17370 | TetR/AcrR family transcriptional regulator |
| 4080 | CP088242.1 | UGB51604.1 JB | 771 [NA] | 256 [AA] | 3798824-3799594 | LQ330_17565 | glycine zipper 2TM domain-containing protein |
| 4081 | CP088242.1 | UGB51605.1 JB | 300 [NA] | 99 [AA] | 3846174-3846473 | LQ330_17790 | YciI family protein |
| 4082 | CP088242.1 | UGB51606.1 JB | 1251 [NA] | 416 [AA] | 3874584-3875834 | LQ330_17935 | poly-beta-1,6 N-acetyl-D-glucosamine synthase |
| 4083 | CP088242.1 | UGB51607.1 JB | 198 [NA] | 65 [AA] | 3893097-3893294 | LQ330_18020 | membrane protein insertion efficiency factor YidD |
| 4084 | CP088242.1 | UGB51608.1 JB | 486 [NA] | 161 [AA] | 3927564-3928049 | LQ330_18175 | hypothetical protein |
| 4085 | CP088242.1 | UGB51609.1 JB | 1908 [NA] | 635 [AA] | 3935727-3937634 | LQ330_18225 | 1-deoxy-D-xylulose-5-phosphate synthase |
| 4086 | CP088242.1 | UGB51610.1 JB | 357 [NA] | 118 [AA] | 3980718-3981074 | LQ330_18470 | NADH-quinone oxidoreductase subunit A |
| 4087 | CP088242.1 | UGB51611.1 JB | 405 [NA] | 134 [AA] | 4080762-4081166 | LQ330_18910 | VOC family protein |
| 4088 | CP088242.1 | UGB51612.1 JB | 591 [NA] | 196 [AA] | 4084322-4084912 | LQ330_18925 | HAD-IB family hydrolase |
| 4089 | CP088242.1 | UGB51613.1 JB | 1320 [NA] | 439 [AA] | 4088606-4089925 | LQ330_18945 | virulence factor family protein |
| 4090 | CP088242.1 | UGB51614.1 JB | 249 [NA] | 82 [AA] | 4095005-4095253 | LQ330_18980 | YkgJ family cysteine cluster protein |
| 4091 | CP088242.1 | UGB51615.1 JB | 1794 [NA] | 597 [AA] | 4130636-4132429 | LQ330_19170 | translation elongation factor 4 |
| 4092 | CP088242.1 | UGB51616.1 JB | 864 [NA] | 287 [AA] | 4138660-4139523 | LQ330_19195 | pirin family protein |
| 4093 | CP088242.1 | UGB51617.1 JB | 714 [NA] | 237 [AA] | 4139651-4140364 | LQ330_19200 | aquaporin Z |
| 4094 | CP088242.1 | UGB51618.1 JB | 1227 [NA] | 408 [AA] | 4157430-4158656 | LQ330_19270 | multidrug effflux MFS transporter |
| 4095 | CP088242.1 | UGB51619.1 JB | 1584 [NA] | 527 [AA] | 4199629-4201212 | LQ330_19430 | propionate catabolism operon regulatory protein PrpR |
| 4096 | CP088242.1 | UGB51620.1 JB | 522 [NA] | 173 [AA] | 4277286-4277807 | LQ330_19760 | hypothetical protein |
| 4097 | CP088242.1 | UGB51621.1 JB | 201 [NA] | 66 [AA] | 4388028-4388228 | LQ330_20230 | sulfur carrier protein ThiS |
| 4098 | CP088242.1 | UGB51622.1 JB | 1110 [NA] | 369 [AA] | 4447402-4448511 | LQ330_20485 | pilus assembly protein PilM |
| 4099 | CP088242.1 | UGB51623.1 JB | 1323 [NA] | 440 [AA] | 4493099-4494421 | LQ330_20660 | aminopeptidase P N-terminal domain-containing protein |
| 4100 | CP088242.1 | UGB51624.1 JB | 933 [NA] | 310 [AA] | 4525016-4525948 | LQ330_20840 | FecR domain-containing protein |
| 4101 | CP088242.1 | UGB51625.1 JB | 3102 [NA] | 1033 [AA] | 4556607-4559708 | LQ330_20975 | efflux RND transporter permease subunit |
| 4102 | CP088242.1 | UGB51626.1 JB | 1140 [NA] | 379 [AA] | 4588864-4590003 | LQ330_21090 | porin |
| 4103 | CP088242.1 | UGB51627.1 JB | 1329 [NA] | 442 [AA] | 4590080-4591408 | LQ330_21095 | CitMHS family transporter |
| 4104 | CP088242.1 | UGB51628.1 JB | 486 [NA] | 161 [AA] | 54570-55055 | LQ330_00250 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase |
| 4105 | CP088242.1 | UGB51629.1 JB | 1239 [NA] | 412 [AA] | 63569-64807 | LQ330_00290 | hypothetical protein |
| 4106 | CP088242.1 | UGB51630.1 JB | 471 [NA] | 156 [AA] | 145967-146437 | LQ330_00675 | F0F1 ATP synthase subunit B |
| 4107 | CP088242.1 | UGB51631.1 JB | 1098 [NA] | 365 [AA] | 171543-172640 | LQ330_00790 | methyl-accepting chemotaxis protein |
| 4108 | CP088242.1 | UGB51632.1 JB | 348 [NA] | 115 [AA] | 188480-188827 | LQ330_00875 | DoxX family protein |
| 4109 | CP088242.1 | UGB51633.1 JB | 474 [NA] | 157 [AA] | 190533-191006 | LQ330_00890 | fasciclin domain-containing protein |
| 4110 | CP088242.1 | UGB51634.1 JB | 1059 [NA] | 352 [AA] | 199563-200621 | LQ330_00935 | CDP-glycerol glycerophosphotransferase family protein |
| 4111 | CP088242.1 | UGB51635.1 JB | 1257 [NA] | 418 [AA] | 201457-202713 | LQ330_00945 | O-antigen ligase family protein |
| 4112 | CP088242.1 | UGB51636.1 JB | 183 [NA] | 60 [AA] | 2870633-2870815 | LQ330_13340 | hypothetical protein |
| 4113 | CP088242.1 | UGB51637.1 JB | 195 [NA] | 64 [AA] | 1220215-1220409 | LQ330_05600 | hypothetical protein |
| 4114 | CP088242.1 | UGB51638.1 JB | 339 [NA] | 112 [AA] | 1753345-1753683 | LQ330_08020 | hypothetical protein |