Genome Explorer: Treponema socranskii ATCC 35536 (SEQF6960.1)
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NCBI Annotation for SEQF6960.1
| Genome selected: Treponema socranskii ATCC 35536 | |||
| Contigs: | 84 | Bases: | 2826695 bps |
| CDS: | 2624 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 45 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2501 | AVQI01000084.1 | ERJ97651.1 JB | 1170 [NA] | 389 [AA] | 110612-111781 | HMPREF0860_0461 | hypothetical protein |
| 2502 | AVQI01000084.1 | ERJ97652.1 JB | 1533 [NA] | 510 [AA] | 92691-94223 | HMPREF0860_0444 | carbohydrate kinase, FGGY family protein |
| 2503 | AVQI01000084.1 | ERJ97653.1 JB | 498 [NA] | 165 [AA] | 151804-152301 | HMPREF0860_0503 | sporulation and spore germination |
| 2504 | AVQI01000084.1 | ERJ97654.1 JB | 3003 [NA] | 1000 [AA] | 107346-110348 | HMPREF0860_0459 | peptidase, M16 family |
| 2505 | AVQI01000084.1 | ERJ97655.1 JB | 984 [NA] | 327 [AA] | 54348-55331 | HMPREF0860_0408 | methionyl-tRNA formyltransferase |
| 2506 | AVQI01000084.1 | ERJ97656.1 JB | 408 [NA] | 135 [AA] | 38478-38885 | HMPREF0860_0394 | putative lipoprotein |
| 2507 | AVQI01000084.1 | ERJ97657.1 JB | 1050 [NA] | 349 [AA] | 150758-151807 | HMPREF0860_0502 | N-acetylmuramoyl-L-alanine amidase |
| 2508 | AVQI01000084.1 | ERJ97658.1 JB | 1920 [NA] | 639 [AA] | 176661-178580 | HMPREF0860_0524 | hypothetical protein |
| 2509 | AVQI01000084.1 | ERJ97659.1 JB | 1218 [NA] | 405 [AA] | 162172-163389 | HMPREF0860_0512 | trans-2-enoyl-CoA reductase catalytic region |
| 2510 | AVQI01000084.1 | ERJ97660.1 JB | 1002 [NA] | 333 [AA] | 29970-30971 | HMPREF0860_0386 | von Willebrand factor type A domain protein |
| 2511 | AVQI01000084.1 | ERJ97661.1 JB | 963 [NA] | 320 [AA] | 87274-88236 | HMPREF0860_0440 | sporulation and cell division repeat protein |
| 2512 | AVQI01000084.1 | ERJ97662.1 JB | 360 [NA] | 119 [AA] | 71555-71914 | HMPREF0860_0425 | putative lipoprotein |
| 2513 | AVQI01000084.1 | ERJ97663.1 JB | 375 [NA] | 124 [AA] | 22094-22468 | HMPREF0860_0378 | ribosomal protein S12 |
| 2514 | AVQI01000084.1 | ERJ97664.1 JB | 792 [NA] | 263 [AA] | 158147-158938 | HMPREF0860_0509 | hydrolase, TatD family |
| 2515 | AVQI01000084.1 | ERJ97665.1 JB | 177 [NA] | 58 [AA] | 10054-10230 | HMPREF0860_0367 | ribosomal protein L33 |
| 2516 | AVQI01000084.1 | ERJ97666.1 JB | 2586 [NA] | 861 [AA] | 112782-115367 | HMPREF0860_0464 | ATP-dependent chaperone protein ClpB |
| 2517 | AVQI01000084.1 | ERJ97667.1 JB | 771 [NA] | 256 [AA] | 85256-86026 | HMPREF0860_0438 | adenylate cyclase |
| 2518 | AVQI01000084.1 | ERJ97668.1 JB | 279 [NA] | 92 [AA] | 66702-66980 | HMPREF0860_0421 | hypothetical protein |
| 2519 | AVQI01000084.1 | ERJ97669.1 JB | 792 [NA] | 263 [AA] | 127929-128720 | HMPREF0860_0479 | tRNA (guanine(37)-N(1))-methyltransferase |
| 2520 | AVQI01000084.1 | ERJ97670.1 JB | 909 [NA] | 302 [AA] | 143004-143912 | HMPREF0860_0497 | hypothetical protein |
| 2521 | AVQI01000084.1 | ERJ97671.1 JB | 369 [NA] | 122 [AA] | 131223-131591 | HMPREF0860_0484 | TIGR00252 family protein |
| 2522 | AVQI01000084.1 | ERJ97672.1 JB | 918 [NA] | 305 [AA] | 7670-8587 | HMPREF0860_0363 | hexose kinase, 1-phosphofructokinase family |
| 2523 | AVQI01000084.1 | ERJ97673.1 JB | 1950 [NA] | 649 [AA] | 40453-42402 | HMPREF0860_0397 | PF01973 family protein |
| 2524 | AVQI01000084.1 | ERJ97674.1 JB | 537 [NA] | 178 [AA] | 74795-75331 | HMPREF0860_0429 | hypothetical protein |
| 2525 | AVQI01000084.1 | ERJ97675.1 JB | 681 [NA] | 226 [AA] | 11818-12498 | HMPREF0860_0372 | ribosomal protein L1 |
| 2526 | AVQI01000084.1 | ERJ97676.1 JB | 492 [NA] | 163 [AA] | 131790-132281 | HMPREF0860_0486 | hypothetical protein |
| 2527 | AVQI01000084.1 | ERJ97677.1 JB | 624 [NA] | 207 [AA] | 76428-77051 | HMPREF0860_0431 | hypothetical protein |
| 2528 | AVQI01000084.1 | ERJ97678.1 JB | 312 [NA] | 103 [AA] | 63262-63573 | HMPREF0860_0416 | hypothetical protein |
| 2529 | AVQI01000084.1 | ERJ97679.1 JB | 843 [NA] | 280 [AA] | 95200-96042 | HMPREF0860_0446 | putative hexulose-6-phosphate isomerase |
| 2530 | AVQI01000084.1 | ERJ97680.1 JB | 858 [NA] | 285 [AA] | 140195-141052 | HMPREF0860_0494 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
| 2531 | AVQI01000084.1 | ERJ97681.1 JB | 2808 [NA] | 935 [AA] | 89013-91820 | HMPREF0860_0442 | DNA-directed DNA polymerase |
| 2532 | AVQI01000084.1 | ERJ97682.1 JB | 609 [NA] | 202 [AA] | 82754-83362 | HMPREF0860_0435 | response regulator receiver domain protein |
| 2533 | AVQI01000084.1 | ERJ97683.1 JB | 234 [NA] | 77 [AA] | 127099-127332 | HMPREF0860_0477 | KH domain protein |
| 2534 | AVQI01000084.1 | ERJ97684.1 JB | 891 [NA] | 296 [AA] | 3354-4244 | HMPREF0860_0358 | ABC transporter, permease protein |
| 2535 | AVQI01000084.1 | ERJ97685.1 JB | 1134 [NA] | 377 [AA] | 135381-136514 | HMPREF0860_0490 | AAA domain protein |
| 2536 | AVQI01000084.1 | ERJ97686.1 JB | 156 [NA] | 51 [AA] | 1693-1848 | HMPREF0860_0356 | HRDC domain protein |
| 2537 | AVQI01000084.1 | ERJ97687.1 JB | 876 [NA] | 291 [AA] | 34655-35530 | HMPREF0860_0390 | aldose 1-epimerase |
| 2538 | AVQI01000084.1 | ERJ97688.1 JB | 936 [NA] | 311 [AA] | 5073-6008 | HMPREF0860_0360 | sugar-binding domain protein |
| 2539 | AVQI01000084.1 | ERJ97689.1 JB | 1743 [NA] | 580 [AA] | 137002-138744 | HMPREF0860_0492 | export membrane protein SecD |
| 2540 | AVQI01000084.1 | ERJ97690.1 JB | 921 [NA] | 306 [AA] | 169612-170532 | HMPREF0860_0518 | transporter, small conductance mechanosensitive ion channel MscS family protein |
| 2541 | AVQI01000084.1 | ERJ97691.1 JB | 1245 [NA] | 414 [AA] | 129298-130542 | HMPREF0860_0481 | hypothetical protein |
| 2542 | AVQI01000084.1 | ERJ97692.1 JB | 1044 [NA] | 347 [AA] | 123520-124563 | HMPREF0860_0473 | glycosyltransferases group 1 |
| 2543 | AVQI01000084.1 | ERJ97693.1 JB | 678 [NA] | 225 [AA] | 117061-117738 | HMPREF0860_0466 | PF14103 domain protein |
| 2544 | AVQI01000084.1 | ERJ97694.1 JB | 1641 [NA] | 546 [AA] | 30973-32613 | HMPREF0860_0387 | von Willebrand factor type A domain protein |
| 2545 | AVQI01000084.1 | ERJ97695.1 JB | 1488 [NA] | 495 [AA] | 100685-102172 | HMPREF0860_0452 | ABC transporter, ATP-binding protein |
| 2546 | AVQI01000084.1 | ERJ97696.1 JB | 1041 [NA] | 346 [AA] | 64550-65590 | HMPREF0860_0418 | protein-(glutamine-N5) methyltransferase, release factor-specific |
| 2547 | AVQI01000084.1 | ERJ97697.1 JB | 1509 [NA] | 502 [AA] | 168096-169604 | HMPREF0860_0517 | phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I |
| 2548 | AVQI01000084.1 | ERJ97698.1 JB | 1008 [NA] | 335 [AA] | 55454-56461 | HMPREF0860_0409 | leucine rich repeat domain protein |
| 2549 | AVQI01000084.1 | ERJ97699.1 JB | 1278 [NA] | 425 [AA] | 178670-179947 | HMPREF0860_0525 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase |
| 2550 | AVQI01000084.1 | ERJ97700.1 JB | 567 [NA] | 188 [AA] | 103553-104119 | HMPREF0860_0454 | 2'-5' RNA ligase family protein |
| 2551 | AVQI01000084.1 | ERJ97701.1 JB | 1242 [NA] | 413 [AA] | 153557-154798 | HMPREF0860_0505 | RelA/SpoT domain protein |
| 2552 | AVQI01000084.1 | ERJ97702.1 JB | 924 [NA] | 307 [AA] | 163491-164414 | HMPREF0860_0513 | aspartate carbamoyltransferase |
| 2553 | AVQI01000084.1 | ERJ97703.1 JB | 1029 [NA] | 342 [AA] | 57850-58878 | HMPREF0860_0411 | tRNA threonylcarbamoyl adenosine modification protein TsaD |
| 2554 | AVQI01000084.1 | ERJ97704.1 JB | 1368 [NA] | 455 [AA] | 52242-53609 | HMPREF0860_0406 | histidinol dehydrogenase |
| 2555 | AVQI01000084.1 | ERJ97705.1 JB | 152 [NA] | 50 [AA] | 180303->180454 | HMPREF0860_0526 | putative lipoprotein |
| 2556 | AVQI01000084.1 | ERJ97706.1 JB | 4260 [NA] | 1419 [AA] | 17655-21914 | HMPREF0860_0377 | DNA-directed RNA polymerase, beta' subunit |
| 2557 | AVQI01000084.1 | ERJ97707.1 JB | 600 [NA] | 199 [AA] | 157445-158044 | HMPREF0860_0508 | hypothetical protein |
| 2558 | AVQI01000084.1 | ERJ97708.1 JB | 975 [NA] | 324 [AA] | 68314-69288 | HMPREF0860_0422 | WYL domain protein |
| 2559 | AVQI01000084.1 | ERJ97709.1 JB | 264 [NA] | 87 [AA] | 104543-104806 | HMPREF0860_0456 | PF14384 domain protein |
| 2560 | AVQI01000084.1 | ERJ97710.1 JB | 558 [NA] | 185 [AA] | 10653-11210 | HMPREF0860_0370 | transcription termination/antitermination factor NusG |
| 2561 | AVQI01000084.1 | ERJ97711.1 JB | 645 [NA] | 214 [AA] | 170563-171207 | HMPREF0860_0519 | endonuclease III |
| 2562 | AVQI01000084.1 | ERJ97712.1 JB | 762 [NA] | 253 [AA] | 37276-38037 | HMPREF0860_0392 | oxidoreductase, aldo/keto reductase family protein |
| 2563 | AVQI01000084.1 | ERJ97713.1 JB | 222 [NA] | 73 [AA] | 110370-110591 | HMPREF0860_0460 | hypothetical protein |
| 2564 | AVQI01000084.1 | ERJ97714.1 JB | 2610 [NA] | 869 [AA] | 146373-148982 | HMPREF0860_0500 | cytidylyltransferase |
| 2565 | AVQI01000084.1 | ERJ97715.1 JB | 966 [NA] | 321 [AA] | 83499-84464 | HMPREF0860_0436 | signal peptide peptidase SppA, 36K type |
| 2566 | AVQI01000084.1 | ERJ97716.1 JB | 315 [NA] | 104 [AA] | 172496-172810 | HMPREF0860_0521 | carbohydrate-binding module 48 |
| 2567 | AVQI01000084.1 | ERJ97717.1 JB | 1443 [NA] | 480 [AA] | 32619-34061 | HMPREF0860_0388 | hypothetical protein |
| 2568 | AVQI01000084.1 | ERJ97718.1 JB | 132 [NA] | 43 [AA] | 73982-74113 | HMPREF0860_0427 | hypothetical protein |
| 2569 | AVQI01000084.1 | ERJ97719.1 JB | 1734 [NA] | 577 [AA] | 59439-61172 | HMPREF0860_0412 | ABC transporter transmembrane region |
| 2570 | AVQI01000084.1 | ERJ97720.1 JB | 1092 [NA] | 363 [AA] | 124595-125686 | HMPREF0860_0474 | glycosyltransferases group 1 |
| 2571 | AVQI01000084.1 | ERJ97721.1 JB | 477 [NA] | 158 [AA] | 128722-129198 | HMPREF0860_0480 | ribosomal protein L19 |
| 2572 | AVQI01000084.1 | ERJ97722.1 JB | 849 [NA] | 282 [AA] | 125702-126550 | HMPREF0860_0475 | glycosyltransferase, group 2 family protein |
| 2573 | AVQI01000084.1 | ERJ97723.1 JB | 1500 [NA] | 499 [AA] | 164945-166444 | HMPREF0860_0515 | dihydro-orotase-like protein |
| 2574 | AVQI01000084.1 | ERJ97724.1 JB | 246 [NA] | 81 [AA] | 46079-46324 | HMPREF0860_0401 | hypothetical protein |
| 2575 | AVQI01000084.1 | ERJ97725.1 JB | 471 [NA] | 156 [AA] | 22483-22953 | HMPREF0860_0379 | ribosomal protein S7 |
| 2576 | AVQI01000084.1 | ERJ97726.1 JB | 480 [NA] | 159 [AA] | 99198-99677 | HMPREF0860_0450 | branched-chain amino acid ABC transporter, permease domain protein |
| 2577 | AVQI01000084.1 | ERJ97727.1 JB | 1515 [NA] | 504 [AA] | 70035-71549 | HMPREF0860_0424 | magnesium transporter |
| 2578 | AVQI01000084.1 | ERJ97728.1 JB | 969 [NA] | 322 [AA] | 50112-51080 | HMPREF0860_0404 | DNA adenine methyltransferase YhdJ |
| 2579 | AVQI01000084.1 | ERJ97729.1 JB | 402 [NA] | 133 [AA] | 112100-112501 | HMPREF0860_0463 | PIN domain protein |
| 2580 | AVQI01000084.1 | ERJ97730.1 JB | 1365 [NA] | 454 [AA] | 105978-107342 | HMPREF0860_0458 | FliG C-terminal domain protein |
| 2581 | AVQI01000084.1 | ERJ97731.1 JB | 1551 [NA] | 516 [AA] | 144009-145559 | HMPREF0860_0498 | spiro-SPASM protein |
| 2582 | AVQI01000084.1 | ERJ97732.1 JB | 300 [NA] | 99 [AA] | 38073-38372 | HMPREF0860_0393 | DNA-binding helix-turn-helix protein |
| 2583 | AVQI01000084.1 | ERJ97733.1 JB | 513 [NA] | 170 [AA] | 98667-99179 | HMPREF0860_0449 | branched-chain amino acid ABC transporter, permease domain protein |
| 2584 | AVQI01000084.1 | ERJ97734.1 JB | 1959 [NA] | 652 [AA] | 71916-73874 | HMPREF0860_0426 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
| 2585 | AVQI01000084.1 | ERJ97735.1 JB | 396 [NA] | 131 [AA] | 136591-136986 | HMPREF0860_0491 | preprotein translocase, YajC subunit |
| 2586 | AVQI01000084.1 | ERJ97736.1 JB | 1869 [NA] | 622 [AA] | 42383-44251 | HMPREF0860_0398 | penicillin-binding protein, transpeptidase domain protein |
| 2587 | AVQI01000084.1 | ERJ97737.1 JB | 1254 [NA] | 417 [AA] | 122289-123542 | HMPREF0860_0472 | hypothetical protein |
| 2588 | AVQI01000084.1 | ERJ97738.1 JB | 384 [NA] | 127 [AA] | 13431-13814 | HMPREF0860_0374 | ribosomal protein L7/L12 |
| 2589 | AVQI01000084.1 | ERJ97739.1 JB | 1092 [NA] | 363 [AA] | 65623-66714 | HMPREF0860_0419 | peptide chain release factor 1 |
| 2590 | AVQI01000084.1 | ERJ97740.1 JB | 1062 [NA] | 353 [AA] | 141045-142106 | HMPREF0860_0495 | oxidoreductase, NAD-binding domain protein |
| 2591 | AVQI01000084.1 | ERJ97741.1 JB | 1191 [NA] | 396 [AA] | 44806-45996 | HMPREF0860_0400 | peptidase, M23 family |
| 2592 | AVQI01000084.1 | ERJ97742.1 JB | 1254 [NA] | 417 [AA] | 24216-25469 | HMPREF0860_0381 | ABC transporter, solute-binding protein |
| 2593 | AVQI01000084.1 | ERJ97743.1 JB | 399 [NA] | 132 [AA] | 118045-118443 | HMPREF0860_0467 | putative glycerol-3-phosphate cytidylyltransferase |
| 2594 | AVQI01000084.1 | ERJ97744.1 JB | 828 [NA] | 275 [AA] | 91858-92685 | HMPREF0860_0443 | putative rhamnulose-1-phosphate aldolase |
| 2595 | AVQI01000084.1 | ERJ97745.1 JB | 1758 [NA] | 585 [AA] | 148975-150732 | HMPREF0860_0501 | phosphoribosylamine--glycine ligase-like protein |
| 2596 | AVQI01000084.1 | ERJ97746.1 JB | 3552 [NA] | 1183 [AA] | 14111-17662 | HMPREF0860_0376 | DNA-directed RNA polymerase, beta subunit |
| 2597 | AVQI01000084.1 | ERJ97747.1 JB | 612 [NA] | 203 [AA] | 88405-89016 | HMPREF0860_0441 | dephospho-CoA kinase |
| 2598 | AVQI01000084.1 | ERJ97748.1 JB | 708 [NA] | 235 [AA] | 12501-13208 | HMPREF0860_0373 | ribosomal protein L10 |
| 2599 | AVQI01000084.1 | ERJ97749.1 JB | 954 [NA] | 317 [AA] | 145534-146487 | HMPREF0860_0499 | hypothetical protein |
| 2600 | AVQI01000084.1 | ERJ97750.1 JB | 1245 [NA] | 414 [AA] | 138744-139988 | HMPREF0860_0493 | export membrane protein SecF |
| 2601 | AVQI01000084.1 | ERJ97751.1 JB | 1260 [NA] | 419 [AA] | 102215-103474 | HMPREF0860_0453 | putative L-rhamnose isomerase |
| 2602 | AVQI01000084.1 | ERJ97752.1 JB | 477 [NA] | 158 [AA] | 58964-59440 | HMPREF0860_0413 | RF-1 domain protein |
| 2603 | AVQI01000084.1 | ERJ97753.1 JB | 2259 [NA] | 752 [AA] | 46321-48579 | HMPREF0860_0402 | polysaccharide deacetylase |
| 2604 | AVQI01000084.1 | ERJ97754.1 JB | 888 [NA] | 295 [AA] | 75328-76215 | HMPREF0860_0430 | GHKL domain protein |
| 2605 | AVQI01000084.1 | ERJ97755.1 JB | 861 [NA] | 286 [AA] | 6744-7604 | HMPREF0860_0362 | putative tagatose-bisphosphate aldolase |
| 2606 | AVQI01000084.1 | ERJ97756.1 JB | 1119 [NA] | 372 [AA] | 115946-117064 | HMPREF0860_0465 | AAA domain protein |
| 2607 | AVQI01000084.1 | ERJ97757.1 JB | 1032 [NA] | 343 [AA] | 79711-80742 | HMPREF0860_0433 | adenosine deaminase |
| 2608 | AVQI01000084.1 | ERJ97758.1 JB | 651 [NA] | 216 [AA] | 53622-54272 | HMPREF0860_0407 | peptide deformylase |
| 2609 | AVQI01000084.1 | ERJ97759.1 JB | 516 [NA] | 171 [AA] | 121773-122288 | HMPREF0860_0471 | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase domain protein |
| 2610 | AVQI01000084.1 | ERJ97760.1 JB | 2088 [NA] | 695 [AA] | 77079-79166 | HMPREF0860_0432 | sulfatase-modifying factor enzyme 1 |
| 2611 | AVQI01000084.1 | ERJ97761.1 JB | 585 [NA] | 194 [AA] | 127340-127924 | HMPREF0860_0478 | 16S rRNA processing protein RimM |
| 2612 | AVQI01000084.1 | ERJ97762.1 JB | 762 [NA] | 253 [AA] | 84451-85212 | HMPREF0860_0437 | PF06161 domain protein |
| 2613 | AVQI01000084.1 | ERJ97763.1 JB | 1164 [NA] | 387 [AA] | 120087-121250 | HMPREF0860_0469 | hypothetical protein |
| 2614 | AVQI01000084.1 | ERJ97764.1 JB | 252 [NA] | 83 [AA] | 130539-130790 | HMPREF0860_0482 | FlhB/HrpN/YscU/SpaS domain protein |
| 2615 | AVQI01000084.1 | ERJ97765.1 JB | 582 [NA] | 193 [AA] | 6048-6629 | HMPREF0860_0361 | AAA domain protein |
| 2616 | AVQI01000084.1 | ERJ97766.1 JB | 1026 [NA] | 341 [AA] | 86166-87191 | HMPREF0860_0439 | dihydrouridine synthase |
| 2617 | AVQI01000084.1 | ERJ97767.1 JB | 867 [NA] | 288 [AA] | 94316-95182 | HMPREF0860_0445 | DNA-binding helix-turn-helix protein |
| 2618 | AVQI01000084.1 | ERJ97768.1 JB | 1512 [NA] | 503 [AA] | 20-1531 | HMPREF0860_0355 | ATP-dependent DNA helicase, RecQ family |
| 2619 | AVQI01000084.1 | ERJ97769.1 JB | 699 [NA] | 232 [AA] | 142284-142982 | HMPREF0860_0496 | purine nucleoside phosphorylase |
| 2620 | AVQI01000084.1 | ERJ97770.1 JB | 144 [NA] | 47 [AA] | 63100-63243 | HMPREF0860_0415 | hypothetical protein |
| 2621 | AVQI01000084.1 | ERJ97771.1 JB | 393 [NA] | 130 [AA] | 8722-9114 | HMPREF0860_0364 | PF07009 family protein |
| 2622 | AVQI01000084.1 | ERJ97772.1 JB | 1002 [NA] | 333 [AA] | 28835-29836 | HMPREF0860_0385 | hypothetical protein |
| 2623 | AVQI01000084.1 | ERJ97773.1 JB | 1692 [NA] | 563 [AA] | 158995-160686 | HMPREF0860_0510 | AMP-binding enzyme |
| 2624 | AVQI01000084.1 | ERJ97774.1 JB | 840 [NA] | 279 [AA] | 4237-5076 | HMPREF0860_0359 | ABC transporter, permease protein |