Genome Explorer: Agrobacterium tumefaciens 12D1 (SEQF8729.1)
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NCBI Annotation for SEQF8729.1
| Genome selected: Agrobacterium tumefaciens 12D1 | |||
| Contigs: | 3 | Bases: | 5446032 bps |
| CDS: | 5047 | rRNA: | 12 |
| tmRNA: | 0 | tRNA: | 53 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 5001 | CP033033.1 | AYM84888.1 JB | 939 [NA] | 312 [AA] | 114319-115257 | At12D1_50060 | peptide/nickel transport system ATP-binding protein |
| 5002 | CP033033.1 | AYM84889.1 JB | 1023 [NA] | 340 [AA] | 115254-116276 | At12D1_50070 | peptide/nickel transport system ATP-binding protein |
| 5003 | CP033033.1 | AYM84890.1 JB | 930 [NA] | 309 [AA] | 116270-117199 | At12D1_50080 | peptide/nickel transport system permease protein |
| 5004 | CP033033.1 | AYM84891.1 JB | 861 [NA] | 286 [AA] | 117189-118049 | At12D1_50090 | peptide/nickel transport system permease protein |
| 5005 | CP033033.1 | AYM84892.1 JB | 801 [NA] | 266 [AA] | 118065-118865 | At12D1_50100 | agrocinopine phosphodiesterase |
| 5006 | CP033033.1 | AYM84893.1 JB | 819 [NA] | 272 [AA] | 118858-119676 | At12D1_50110 | myo-inositol-1(or 4)-monophosphatase |
| 5007 | CP033033.1 | AYM84894.1 JB | 510 [NA] | 169 [AA] | 119911-120420 | At12D1_50120 | hypothetical protein |
| 5008 | CP033033.1 | AYM84895.1 JB | 981 [NA] | 326 [AA] | 120473-121453 | At12D1_50130 | hypothetical protein |
| 5009 | CP033033.1 | AYM84896.1 JB | 747 [NA] | 248 [AA] | 121814-122560 | At12D1_50140 | HAD family hydrolase |
| 5010 | CP033033.1 | AYM84897.1 JB | 894 [NA] | 297 [AA] | 122750-123643 | At12D1_50150 | peptide/nickel transport system permease protein |
| 5011 | CP033033.1 | AYM84898.1 JB | 933 [NA] | 310 [AA] | 123643-124575 | At12D1_50160 | peptide/nickel transport system permease protein |
| 5012 | CP033033.1 | AYM84899.1 JB | 726 [NA] | 241 [AA] | 124578-125303 | At12D1_50170 | glycerophosphodiester phosphodiesterase |
| 5013 | CP033033.1 | AYM84900.1 JB | 840 [NA] | 279 [AA] | 125300-126139 | At12D1_50180 | ABC transporter ATP-binding protein |
| 5014 | CP033033.1 | AYM84901.1 JB | 1029 [NA] | 342 [AA] | 126136-127164 | At12D1_50190 | peptide/nickel transport system ATP-binding protein |
| 5015 | CP033033.1 | AYM84902.1 JB | 1641 [NA] | 546 [AA] | 127164-128804 | At12D1_50200 | peptide/nickel transport system substrate-binding protein |
| 5016 | CP033033.1 | AYM84903.1 JB | 648 [NA] | 215 [AA] | 129021-129668 | At12D1_50210 | histidine phosphatase family protein |
| 5017 | CP033033.1 | AYM84904.1 JB | 996 [NA] | 331 [AA] | 129692-130687 | At12D1_50220 | sugar-binding transcriptional regulator |
| 5018 | CP033033.1 | AYM84905.1 JB | 705 [NA] | 234 [AA] | 130722-131426 | At12D1_50230 | transcriptional regulator TraR |
| 5019 | CP033033.1 | AYM84906.1 JB | 210 [NA] | 69 [AA] | 131440-131649 | At12D1_50240 | hypothetical protein |
| 5020 | CP033033.1 | AYM84907.1 JB | 1305 [NA] | 434 [AA] | 131722-133026 | At12D1_50250 | hypothetical protein |
| 5021 | CP033033.1 | AYM84908.1 JB | 1062 [NA] | 353 [AA] | 133045-134106 | At12D1_50260 | ornithine cyclodeaminase |
| 5022 | CP033033.1 | AYM84909.1 JB | 1083 [NA] | 360 [AA] | 134154-135236 | At12D1_50270 | NAD/NADP octopine/nopaline dehydrogenase |
| 5023 | CP033033.1 | AYM84910.1 JB | 861 [NA] | 286 [AA] | 135312-136172 | At12D1_50280 | arginase |
| 5024 | CP033033.1 | AYM84911.1 JB | 1419 [NA] | 472 [AA] | 136316-137734 | At12D1_50290 | D-nopaline dehydrogenase |
| 5025 | CP033033.1 | AYM84912.1 JB | 294 [NA] | 97 [AA] | 137731-138024 | At12D1_50300 | (2Fe-2S)-binding protein |
| 5026 | CP033033.1 | AYM84913.1 JB | 1119 [NA] | 372 [AA] | 138021-139139 | At12D1_50310 | D-nopaline dehydrogenase |
| 5027 | CP033033.1 | AYM84914.1 JB | 2037 [NA] | 678 [AA] | 139750-141786 | At12D1_50320 | N-methylhydantoinase A |
| 5028 | CP033033.1 | AYM84915.1 JB | 1956 [NA] | 651 [AA] | 141790-143745 | At12D1_50330 | N-methylhydantoinase B |
| 5029 | CP033033.1 | AYM84916.1 JB | 831 [NA] | 276 [AA] | 143864-144694 | At12D1_50340 | LysR family transcriptional regulator |
| 5030 | CP033033.1 | AYM84917.1 JB | 726 [NA] | 241 [AA] | 144897-145622 | At12D1_50350 | octopine/nopaline transport system permease protein |
| 5031 | CP033033.1 | AYM84918.1 JB | 756 [NA] | 251 [AA] | 145624-146379 | At12D1_50360 | octopine/nopaline transport system permease protein |
| 5032 | CP033033.1 | AYM84919.1 JB | 852 [NA] | 283 [AA] | 146407-147258 | At12D1_50370 | octopine/nopaline transport system substrate-binding protein |
| 5033 | CP033033.1 | AYM84920.1 JB | 774 [NA] | 257 [AA] | 147323-148096 | At12D1_50380 | octopine/nopaline transport system ATP-binding protein |
| 5034 | CP033033.1 | AYM84921.1 JB | 903 [NA] | 300 [AA] | 148346-149248 | At12D1_50390 | LysR family transcriptional regulator |
| 5035 | CP033033.1 | AYM84922.1 JB | 129 [NA] | 42 [AA] | 149252-149380 | At12D1_50400 | hypothetical protein |
| 5036 | CP033033.1 | AYM84923.1 JB | 1308 [NA] | 435 [AA] | 149377-150684 | At12D1_50410 | conjugal transfer protein TrbI |
| 5037 | CP033033.1 | AYM84924.1 JB | 477 [NA] | 158 [AA] | 150699-151175 | At12D1_50420 | conjugal transfer protein TrbH |
| 5038 | CP033033.1 | AYM84925.1 JB | 855 [NA] | 284 [AA] | 151175-152029 | At12D1_50430 | conjugal transfer protein TrbG |
| 5039 | CP033033.1 | AYM84926.1 JB | 663 [NA] | 220 [AA] | 152047-152709 | At12D1_50440 | conjugal transfer protein TrbF |
| 5040 | CP033033.1 | AYM84927.1 JB | 1203 [NA] | 400 [AA] | 152716-153918 | At12D1_50450 | conjugal transfer protein TrbL |
| 5041 | CP033033.1 | AYM84928.1 JB | 219 [NA] | 72 [AA] | 153912-154130 | At12D1_50460 | entry-exclusion protein |
| 5042 | CP033033.1 | AYM84929.1 JB | 810 [NA] | 269 [AA] | 154127-154936 | At12D1_50470 | conjugal transfer protein TrbJ |
| 5043 | CP033033.1 | AYM84930.1 JB | 2469 [NA] | 822 [AA] | 154908-157376 | At12D1_50480 | conjugal transfer protein TrbE |
| 5044 | CP033033.1 | AYM84931.1 JB | 300 [NA] | 99 [AA] | 157387-157686 | At12D1_50490 | conjugal transfer protein TrbD |
| 5045 | CP033033.1 | AYM84932.1 JB | 408 [NA] | 135 [AA] | 157679-158086 | At12D1_50500 | conjugal transfer protein TrbC |
| 5046 | CP033033.1 | AYM84933.1 JB | 972 [NA] | 323 [AA] | 158076-159047 | At12D1_50510 | conjugal transfer protein TrbB |
| 5047 | CP033033.1 | AYM84934.1 JB | 636 [NA] | 211 [AA] | 159044-159679 | At12D1_50520 | autoinducer synthesis protein |