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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Agrobacterium tumefaciens 1D1609 (SEQF8732.1)
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PROKKA Annotation for SEQF8732.1
Genome selected: Agrobacterium tumefaciens 1D1609
Contigs:5 Bases:5985137 bps
CDS:5644 rRNA:12
tmRNA:1 tRNA:56
Annotation Table [page:12]
Number of Records Found: 5644 [12 Pages]
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# Molecule PID NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
5501 SEQF8732.1_CP026928.1 SEQF8732.1_05473 JB 1461 [NA] 486 [AA] 27483-28943 hypothetical protein
5502 SEQF8732.1_CP026928.1 SEQF8732.1_05474 JB 1065 [NA] 354 [AA] 29150-30214 hypothetical protein
5503 SEQF8732.1_CP026928.1 SEQF8732.1_05475 JB 816 [NA] 271 [AA] 30448-31263 hypothetical protein
5504 SEQF8732.1_CP026928.1 SEQF8732.1_05476 JB 828 [NA] 275 [AA] 31425-32252 hypothetical protein
5505 SEQF8732.1_CP026928.1 SEQF8732.1_05477 JB 885 [NA] 294 [AA] 32249-33133 hypothetical protein
5506 SEQF8732.1_CP026928.1 SEQF8732.1_05478 JB 1212 [NA] 403 [AA] 33339-34550 hypothetical protein
5507 SEQF8732.1_CP026928.1 SEQF8732.1_05479 JB 1302 [NA] 433 [AA] 34741-36042 hypothetical protein
5508 SEQF8732.1_CP026928.1 SEQF8732.1_05480 JB 666 [NA] 221 [AA] 36190-36855 hypothetical protein
5509 SEQF8732.1_CP026928.1 SEQF8732.1_05481 JB 114 [NA] 37 [AA] 36961-37074 hypothetical protein
5510 SEQF8732.1_CP026928.1 SEQF8732.1_05482 JB 174 [NA] 57 [AA] 37276-37449 hypothetical protein
5511 SEQF8732.1_CP026928.1 SEQF8732.1_05483 JB 1077 [NA] 358 [AA] 37544-38620 hypothetical protein
5512 SEQF8732.1_CP026928.1 SEQF8732.1_05484 JB 870 [NA] 289 [AA] 38608-39477 hypothetical protein
5513 SEQF8732.1_CP026928.1 SEQF8732.1_05485 JB 972 [NA] 323 [AA] 39670-40641 hypothetical protein
5514 SEQF8732.1_CP026928.1 SEQF8732.1_05486 JB 249 [NA] 82 [AA] 40619-40867 hypothetical protein
5515 SEQF8732.1_CP026928.1 SEQF8732.1_05487 JB 1809 [NA] 602 [AA] 40870-42678 hypothetical protein
5516 SEQF8732.1_CP026928.1 SEQF8732.1_05488 JB 1008 [NA] 335 [AA] 42721-43728 hypothetical protein
5517 SEQF8732.1_CP026928.1 SEQF8732.1_05489 JB 1314 [NA] 437 [AA] 43757-45070 hypothetical protein
5518 SEQF8732.1_CP026928.1 SEQF8732.1_05490 JB 1413 [NA] 470 [AA] 45142-46554 hypothetical protein
5519 SEQF8732.1_CP026928.1 SEQF8732.1_05491 JB 1731 [NA] 576 [AA] 46547-48277 recF_2 DNA replication and repair protein RecF
5520 SEQF8732.1_CP026928.1 SEQF8732.1_05493 JB 183 [NA] 60 [AA] 48975-49157 hypothetical protein
5521 SEQF8732.1_CP026928.1 SEQF8732.1_05494 JB 963 [NA] 320 [AA] 49369-50331 hypothetical protein
5522 SEQF8732.1_CP026928.1 SEQF8732.1_05495 JB 603 [NA] 200 [AA] 50474-51076 hypothetical protein
5523 SEQF8732.1_CP026928.1 SEQF8732.1_05496 JB 402 [NA] 133 [AA] 51092-51493 hypothetical protein
5524 SEQF8732.1_CP026928.1 SEQF8732.1_05497 JB 5106 [NA] 1701 [AA] 51593-56698 hypothetical protein
5525 SEQF8732.1_CP026928.1 SEQF8732.1_05498 JB 873 [NA] 290 [AA] 56850-57722 hypothetical protein
5526 SEQF8732.1_CP026928.1 SEQF8732.1_05499 JB 1764 [NA] 587 [AA] 57719-59482 hypothetical protein
5527 SEQF8732.1_CP026928.1 SEQF8732.1_05500 JB 1845 [NA] 614 [AA] 59893-61737 hypothetical protein
5528 SEQF8732.1_CP026928.1 SEQF8732.1_05501 JB 471 [NA] 156 [AA] 61836-62306 hypothetical protein
5529 SEQF8732.1_CP026928.1 SEQF8732.1_05502 JB 891 [NA] 296 [AA] 62303-63193 hypothetical protein
5530 SEQF8732.1_CP026928.1 SEQF8732.1_05503 JB 381 [NA] 126 [AA] 63190-63570 hypothetical protein
5531 SEQF8732.1_CP026928.1 SEQF8732.1_05504 JB 600 [NA] 199 [AA] 63961-64560 hypothetical protein
5532 SEQF8732.1_CP026928.1 SEQF8732.1_05505 JB 192 [NA] 63 [AA] 64763-64954 hypothetical protein
5533 SEQF8732.1_CP026928.1 SEQF8732.1_05506 JB 468 [NA] 155 [AA] 65159-65626 hypothetical protein
5534 SEQF8732.1_CP026928.1 SEQF8732.1_05507 JB 153 [NA] 50 [AA] 66168-66320 hypothetical protein
5535 SEQF8732.1_CP026928.1 SEQF8732.1_05508 JB 633 [NA] 210 [AA] 66600-67232 rspR_4 HTH-type transcriptional repressor RspR
5536 SEQF8732.1_CP026928.1 SEQF8732.1_05509 JB 1077 [NA] 358 [AA] 67330-68406 btuD_15 Vitamin B12 import ATP-binding protein BtuD
5537 SEQF8732.1_CP026928.1 SEQF8732.1_05510 JB 1431 [NA] 476 [AA] 68408-69838 gabD_2 Succinate-semialdehyde dehydrogenase [NADP(+)]
5538 SEQF8732.1_CP026928.1 SEQF8732.1_05511 JB 489 [NA] 162 [AA] 69835-70323 hypothetical protein
5539 SEQF8732.1_CP026928.1 SEQF8732.1_05512 JB 1041 [NA] 346 [AA] 70434-71474 hypothetical protein
5540 SEQF8732.1_CP026928.1 SEQF8732.1_05513 JB 801 [NA] 266 [AA] 71538-72338 potB_4 Spermidineputrescine transport system permease protein PotB
5541 SEQF8732.1_CP026928.1 SEQF8732.1_05514 JB 831 [NA] 276 [AA] 72335-73165 hypothetical protein
5542 SEQF8732.1_CP026928.1 SEQF8732.1_05515 JB 837 [NA] 278 [AA] 73191-74027 hypothetical protein
5543 SEQF8732.1_CP026928.1 SEQF8732.1_05516 JB 954 [NA] 317 [AA] 74024-74977 lcdH L-carnitine dehydrogenase
5544 SEQF8732.1_CP026928.1 SEQF8732.1_05517 JB 474 [NA] 157 [AA] 75818-76291 cheW_3 Chemotaxis protein CheW
5545 SEQF8732.1_CP026928.1 SEQF8732.1_05518 JB 1794 [NA] 597 [AA] 76291-78084 bdlA Biofilm dispersion protein BdlA
5546 SEQF8732.1_CP026928.1 SEQF8732.1_05519 JB 114 [NA] 37 [AA] 78118-78231 hypothetical protein
5547 SEQF8732.1_CP026928.1 SEQF8732.1_05520 JB 732 [NA] 243 [AA] 78384-79115 hypothetical protein
5548 SEQF8732.1_CP026928.1 SEQF8732.1_05521 JB 297 [NA] 98 [AA] 79709-80005 hypothetical protein
5549 SEQF8732.1_CP026928.1 SEQF8732.1_05522 JB 297 [NA] 98 [AA] 80547-80843 hypothetical protein
5550 SEQF8732.1_CP026928.1 SEQF8732.1_05523 JB 528 [NA] 175 [AA] 80929-81456 hypothetical protein
5551 SEQF8732.1_CP026928.1 SEQF8732.1_05524 JB 636 [NA] 211 [AA] 81523-82158 hypothetical protein
5552 SEQF8732.1_CP026928.1 SEQF8732.1_05525 JB 147 [NA] 48 [AA] 82301-82447 hypothetical protein
5553 SEQF8732.1_CP026928.1 SEQF8732.1_05526 JB 276 [NA] 91 [AA] 82490-82765 hypothetical protein
5554 SEQF8732.1_CP026928.1 SEQF8732.1_05527 JB 1656 [NA] 551 [AA] 82774-84429 IS66 family transposase IS66
5555 SEQF8732.1_CP026928.1 SEQF8732.1_05528 JB 348 [NA] 115 [AA] 84475-84822 hypothetical protein
5556 SEQF8732.1_CP026928.1 SEQF8732.1_05529 JB 399 [NA] 132 [AA] 84819-85217 hypothetical protein
5557 SEQF8732.1_CP026928.1 SEQF8732.1_05530 JB 1119 [NA] 372 [AA] 85534-86652 IS110 family transposase ISPye17
5558 SEQF8732.1_CP026928.1 SEQF8732.1_05531 JB 2976 [NA] 991 [AA] 87361-90336 Tn3 family transposase ISAzs17
5559 SEQF8732.1_CP026928.1 SEQF8732.1_05532 JB 297 [NA] 98 [AA] 90439-90735 hypothetical protein
5560 SEQF8732.1_CP026928.1 SEQF8732.1_05533 JB 288 [NA] 95 [AA] 91371-91658 hypothetical protein
5561 SEQF8732.1_CP026928.1 SEQF8732.1_05534 JB 336 [NA] 111 [AA] 91962-92297 hypothetical protein
5562 SEQF8732.1_CP026928.1 SEQF8732.1_05535 JB 192 [NA] 63 [AA] 93516-93707 hypothetical protein
5563 SEQF8732.1_CP026928.1 SEQF8732.1_05536 JB 924 [NA] 307 [AA] 94024-94947 occR_2 Octopine catabolismuptake operon regulatory protein OccR
5564 SEQF8732.1_CP026928.1 SEQF8732.1_05537 JB 1110 [NA] 369 [AA] 95276-96385 hypothetical protein
5565 SEQF8732.1_CP026928.1 SEQF8732.1_05538 JB 1011 [NA] 336 [AA] 96504-97514 hypothetical protein
5566 SEQF8732.1_CP026928.1 SEQF8732.1_05539 JB 795 [NA] 264 [AA] 97514-98308 ydcV_7 Inner membrane ABC transporter permease protein YdcV
5567 SEQF8732.1_CP026928.1 SEQF8732.1_05540 JB 1086 [NA] 361 [AA] 98308-99393 potA_10 Spermidineputrescine import ATP-binding protein PotA
5568 SEQF8732.1_CP026928.1 SEQF8732.1_05541 JB 951 [NA] 316 [AA] 99604-100554 odh_1 Opine dehydrogenase
5569 SEQF8732.1_CP026928.1 SEQF8732.1_05542 JB 1203 [NA] 400 [AA] 100586-101788 kbl 2-amino-3-ketobutyrate coenzyme A ligase
5570 SEQF8732.1_CP026928.1 SEQF8732.1_05543 JB 975 [NA] 324 [AA] 101785-102759 putative epimerasedehydratase
5571 SEQF8732.1_CP026928.1 SEQF8732.1_05544 JB 231 [NA] 76 [AA] 102809-103039 dadA D-amino acid dehydrogenase
5572 SEQF8732.1_CP026928.1 SEQF8732.1_05545 JB 675 [NA] 224 [AA] 103040-103714 hypothetical protein
5573 SEQF8732.1_CP026928.1 SEQF8732.1_05546 JB 3084 [NA] 1027 [AA] 103799-106882 hypothetical protein
5574 SEQF8732.1_CP026928.1 SEQF8732.1_05547 JB 1743 [NA] 580 [AA] 107124-108866 prsD_3 Type I secretion system ATP-binding protein PrsD
5575 SEQF8732.1_CP026928.1 SEQF8732.1_05548 JB 1311 [NA] 436 [AA] 108863-110173 prsE_4 Type I secretion system membrane fusion protein PrsE
5576 SEQF8732.1_CP026928.1 SEQF8732.1_05549 JB 1008 [NA] 335 [AA] 110464-111471 ccpA_2 Catabolite control protein A
5577 SEQF8732.1_CP026928.1 SEQF8732.1_05550 JB 1239 [NA] 412 [AA] 111519-112757 hypothetical protein
5578 SEQF8732.1_CP026928.1 SEQF8732.1_05551 JB 918 [NA] 305 [AA] 112840-113757 lacF_8 Lactose transport system permease protein LacF
5579 SEQF8732.1_CP026928.1 SEQF8732.1_05552 JB 879 [NA] 292 [AA] 113754-114632 hypothetical protein
5580 SEQF8732.1_CP026928.1 SEQF8732.1_05553 JB 1971 [NA] 656 [AA] 114632-116602 hypBA1 Non-reducing end beta-L-arabinofuranosidase
5581 SEQF8732.1_CP026928.1 SEQF8732.1_05554 JB 1140 [NA] 379 [AA] 116599-117738 malK_13 Maltosemaltodextrin import ATP-binding protein MalK
5582 SEQF8732.1_CP026928.1 SEQF8732.1_05555 JB 978 [NA] 325 [AA] 118342-119319 rhaS_6 HTH-type transcriptional activator RhaS
5583 SEQF8732.1_CP026928.1 SEQF8732.1_05556 JB 1923 [NA] 640 [AA] 119631-121553 hypothetical protein
5584 SEQF8732.1_CP026928.1 SEQF8732.1_05557 JB 483 [NA] 160 [AA] 121553-122035 cheW_4 Chemotaxis protein CheW
5585 SEQF8732.1_CP026928.1 SEQF8732.1_05558 JB 900 [NA] 299 [AA] 122220-123119 Cyclic di-GMP phosphodiesterase
5586 SEQF8732.1_CP026928.1 SEQF8732.1_05559 JB 186 [NA] 61 [AA] 124137-124322 hypothetical protein
5587 SEQF8732.1_CP026928.1 SEQF8732.1_05560 JB 948 [NA] 315 [AA] 125055-126002 rhaS_7 HTH-type transcriptional activator RhaS
5588 SEQF8732.1_CP026928.1 SEQF8732.1_05561 JB 963 [NA] 320 [AA] 126138-127100 rhaS_8 HTH-type transcriptional activator RhaS
5589 SEQF8732.1_CP026928.1 SEQF8732.1_05562 JB 507 [NA] 168 [AA] 127343-127849 C1-hpah p-hydroxyphenylacetate 3-hydroxylase%2C reductase component
5590 SEQF8732.1_CP026928.1 SEQF8732.1_05563 JB 1362 [NA] 453 [AA] 127955-129316 dmoA Dimethyl-sulfide monooxygenase
5591 SEQF8732.1_CP026928.1 SEQF8732.1_05564 JB 1356 [NA] 451 [AA] 129359-130714 kgtP_2 Alpha-ketoglutarate permease
5592 SEQF8732.1_CP026928.1 SEQF8732.1_05565 JB 1470 [NA] 489 [AA] 130824-132293 gabD_3 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
5593 SEQF8732.1_CP026928.1 SEQF8732.1_05566 JB 903 [NA] 300 [AA] 132295-133197 gltR_2 HTH-type transcriptional regulator GltR
5594 SEQF8732.1_CP026928.1 SEQF8732.1_05567 JB 1179 [NA] 392 [AA] 133278-134456 hypothetical protein
5595 SEQF8732.1_CP026928.1 SEQF8732.1_05568 JB 654 [NA] 217 [AA] 134505-135158 ribB_2 3%2C4-dihydroxy-2-butanone 4-phosphate synthase
5596 SEQF8732.1_CP026928.1 SEQF8732.1_05569 JB 732 [NA] 243 [AA] 135842-136573 inhA Isonitrile hydratase
5597 SEQF8732.1_CP026928.1 SEQF8732.1_05570 JB 858 [NA] 285 [AA] 137287-138144 hypothetical protein
5598 SEQF8732.1_CP026928.1 SEQF8732.1_05571 JB 969 [NA] 322 [AA] 138715-139683 rhaR_10 HTH-type transcriptional activator RhaR
5599 SEQF8732.1_CP026928.1 SEQF8732.1_05572 JB 543 [NA] 180 [AA] 139786-140328 rutB_3 Peroxyureidoacrylateureidoacrylate amidohydrolase RutB
5600 SEQF8732.1_CP026928.1 SEQF8732.1_05573 JB 873 [NA] 290 [AA] 140352-141224 hypothetical protein
5601 SEQF8732.1_CP026928.1 SEQF8732.1_05574 JB 429 [NA] 142 [AA] 141851-142279 hypothetical protein
5602 SEQF8732.1_CP026928.1 SEQF8732.1_05575 JB 978 [NA] 325 [AA] 142444-143421 cdhR_4 HTH-type transcriptional regulator CdhR
5603 SEQF8732.1_CP026928.1 SEQF8732.1_05576 JB 906 [NA] 301 [AA] 144208-145113 IS3 family transposase ISRtr2
5604 SEQF8732.1_CP026928.1 SEQF8732.1_05578 JB 330 [NA] 109 [AA] 145110-145439 Insertion element IS6110 uncharacterized 12.0 kDa protein
5605 SEQF8732.1_CP026928.1 SEQF8732.1_05579 JB 177 [NA] 58 [AA] 146333-146509 hypothetical protein
5606 SEQF8732.1_CP026928.1 SEQF8732.1_05580 JB 1011 [NA] 336 [AA] 146733-147743 hypothetical protein
5607 SEQF8732.1_CP026928.1 SEQF8732.1_05581 JB 603 [NA] 200 [AA] 147805-148407 hypothetical protein
5608 SEQF8732.1_CP026928.1 SEQF8732.1_05582 JB 5085 [NA] 1694 [AA] 148499-153583 hypothetical protein
5609 SEQF8732.1_CP026928.1 SEQF8732.1_05584 JB 1434 [NA] 477 [AA] 153788-155221 hypothetical protein
5610 SEQF8732.1_CP026928.1 SEQF8732.1_05585 JB 828 [NA] 275 [AA] 155205-156032 hypothetical protein
5611 SEQF8732.1_CP026928.1 SEQF8732.1_05586 JB 129 [NA] 42 [AA] 156112-156240 hypothetical protein
5612 SEQF8732.1_CP026928.1 SEQF8732.1_05587 JB 1722 [NA] 573 [AA] 156736-158457 noc_5 Nucleoid occlusion protein
5613 SEQF8732.1_CP026928.1 SEQF8732.1_05588 JB 588 [NA] 195 [AA] 158997-159584 hypothetical protein
5614 SEQF8732.1_CP026928.1 SEQF8732.1_05589 JB 927 [NA] 308 [AA] 159870-160796 traC_2 DNA primase TraC
5615 SEQF8732.1_CP026928.1 SEQF8732.1_05590 JB 177 [NA] 58 [AA] 160811-160987 hypothetical protein
5616 SEQF8732.1_CP026928.1 SEQF8732.1_05591 JB 312 [NA] 103 [AA] 161443-161754 hypothetical protein
5617 SEQF8732.1_CP026928.1 SEQF8732.1_05592 JB 438 [NA] 145 [AA] 161892-162329 hypothetical protein
5618 SEQF8732.1_CP026928.1 SEQF8732.1_05593 JB 174 [NA] 57 [AA] 162883-163056 hypothetical protein
5619 SEQF8732.1_CP026928.1 SEQF8732.1_05594 JB 450 [NA] 149 [AA] 163090-163539 hypothetical protein
5620 SEQF8732.1_CP026928.1 SEQF8732.1_05595 JB 261 [NA] 86 [AA] 163609-163869 hypothetical protein
5621 SEQF8732.1_CP026928.1 SEQF8732.1_05596 JB 789 [NA] 262 [AA] 164057-164845 hypothetical protein
5622 SEQF8732.1_CP026928.1 SEQF8732.1_05597 JB 1908 [NA] 635 [AA] 165074-166981 hypothetical protein
5623 SEQF8732.1_CP026928.1 SEQF8732.1_05598 JB 216 [NA] 71 [AA] 166968-167183 hypothetical protein
5624 SEQF8732.1_CP026928.1 SEQF8732.1_05599 JB 309 [NA] 102 [AA] 167188-167496 hypothetical protein
5625 SEQF8732.1_CP026928.1 SEQF8732.1_05600 JB 3327 [NA] 1108 [AA] 167751-171077 recD2_6 ATP-dependent RecD-like DNA helicase
5626 SEQF8732.1_CP026928.1 SEQF8732.1_05601 JB 543 [NA] 180 [AA] 171074-171616 hypothetical protein
5627 SEQF8732.1_CP026928.1 SEQF8732.1_05602 JB 1164 [NA] 387 [AA] 171606-172769 hypothetical protein
5628 SEQF8732.1_CP026928.1 SEQF8732.1_05604 JB 618 [NA] 205 [AA] 172786-173403 hypothetical protein
5629 SEQF8732.1_CP026928.1 SEQF8732.1_05605 JB 1566 [NA] 521 [AA] 173635-175200 hypothetical protein
5630 SEQF8732.1_CP026928.1 SEQF8732.1_05606 JB 222 [NA] 73 [AA] 175314-175535 hypothetical protein
5631 SEQF8732.1_CP026928.1 SEQF8732.1_05607 JB 321 [NA] 106 [AA] 175749-176069 traM_2 putative transcriptional repressor TraM
5632 SEQF8732.1_CP026928.1 SEQF8732.1_05608 JB 705 [NA] 234 [AA] 176073-176777 traR_2 putative transcriptional activator protein TraR
5633 SEQF8732.1_CP026928.1 SEQF8732.1_05609 JB 1296 [NA] 431 [AA] 177099-178394 hypothetical protein
5634 SEQF8732.1_CP026928.1 SEQF8732.1_05610 JB 441 [NA] 146 [AA] 178406-178846 hypothetical protein
5635 SEQF8732.1_CP026928.1 SEQF8732.1_05611 JB 813 [NA] 270 [AA] 178850-179662 hypothetical protein
5636 SEQF8732.1_CP026928.1 SEQF8732.1_05612 JB 663 [NA] 220 [AA] 179680-180342 hypothetical protein
5637 SEQF8732.1_CP026928.1 SEQF8732.1_05613 JB 1182 [NA] 393 [AA] 180362-181543 hypothetical protein
5638 SEQF8732.1_CP026928.1 SEQF8732.1_05614 JB 201 [NA] 66 [AA] 181537-181737 hypothetical protein
5639 SEQF8732.1_CP026928.1 SEQF8732.1_05615 JB 804 [NA] 267 [AA] 181734-182537 hypothetical protein
5640 SEQF8732.1_CP026928.1 SEQF8732.1_05616 JB 2457 [NA] 818 [AA] 182509-184965 virB4_3 Type IV secretion system protein virB4
5641 SEQF8732.1_CP026928.1 SEQF8732.1_05617 JB 300 [NA] 99 [AA] 184976-185275 hypothetical protein
5642 SEQF8732.1_CP026928.1 SEQF8732.1_05618 JB 384 [NA] 127 [AA] 185268-185651 hypothetical protein
5643 SEQF8732.1_CP026928.1 SEQF8732.1_05619 JB 978 [NA] 325 [AA] 185641-186618 hypothetical protein
5644 SEQF8732.1_CP026928.1 SEQF8732.1_05620 JB 624 [NA] 207 [AA] 186629-187252 esaI Acyl-homoserine-lactone synthase