Genome Explorer: Agrobacterium tumefaciens LMG 140 (SEQF8766.1)
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NCBI Annotation for SEQF8766.1
| Genome selected: Agrobacterium tumefaciens LMG 140 | |||
| Contigs: | 22 | Bases: | 5491420 bps |
| CDS: | 136 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 49 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 5001 | MRDG01000020.1 | OOO30839.1 JB | 1128 [NA] | 375 [AA] | 535985-537112 | BS628_26135 | ATP-binding protein |
| 5002 | MRDG01000020.1 | OOO30840.1 JB | 1266 [NA] | 421 [AA] | 538880-540145 | BS628_26150 | FAD-dependent oxidoreductase |
| 5003 | MRDG01000020.1 | OOO30841.1 JB | 1047 [NA] | 348 [AA] | 540376-541422 | BS628_26155 | hydroxyacid dehydrogenase |
| 5004 | MRDG01000020.1 | OOO30842.1 JB | 906 [NA] | 301 [AA] | 541616-542521 | BS628_26160 | AraC family transcriptional regulator |
| 5005 | MRDG01000020.1 | OOO30843.1 JB | 654 [NA] | 217 [AA] | 542916-543569 | BS628_26165 | TetR family transcriptional regulator |
| 5006 | MRDG01000020.1 | OOO30844.1 JB | 1020 [NA] | 339 [AA] | 543619-544638 | BS628_26170 | ketol-acid reductoisomerase |
| 5007 | MRDG01000020.1 | OOO30845.1 JB | 1032 [NA] | 343 [AA] | 544810-545841 | BS628_26175 | endonuclease |
| 5008 | MRDG01000020.1 | OOO30846.1 JB | 453 [NA] | 150 [AA] | 545949-546401 | BS628_26180 | fucose-binding protein |
| 5009 | MRDG01000020.1 | OOO30847.1 JB | 1245 [NA] | 414 [AA] | 546675-547919 | BS628_26185 | GntR family transcriptional regulator |
| 5010 | MRDG01000020.1 | OOO30848.1 JB | 984 [NA] | 327 [AA] | 548247-549230 | BS628_26195 | ABC transporter substrate-binding protein |
| 5011 | MRDG01000020.1 | OOO30849.1 JB | 1695 [NA] | 564 [AA] | 549240-550934 | BS628_26200 | ABC transporter permease |
| 5012 | MRDG01000020.1 | OOO30850.1 JB | 1026 [NA] | 341 [AA] | 550922-551947 | BS628_26205 | ABC transporter ATP-binding protein |
| 5013 | MRDG01000020.1 | OOO30851.1 JB | 1110 [NA] | 369 [AA] | 552215-553324 | BS628_26210 | endonuclease |
| 5014 | MRDG01000020.1 | OOO30852.1 JB | 1740 [NA] | 579 [AA] | 553356-555095 | BS628_26215 | GGDEF domain-containing protein |
| 5015 | MRDG01000020.1 | OOO30853.1 JB | 570 [NA] | 189 [AA] | 556114-556683 | BS628_26225 | hypothetical protein |
| 5016 | MRDG01000020.1 | OOO30854.1 JB | 354 [NA] | 117 [AA] | 556789-557142 | BS628_26230 | hypothetical protein |
| 5017 | MRDG01000020.1 | OOO30855.1 JB | 603 [NA] | 200 [AA] | 557538-558140 | BS628_26235 | molecular chaperone DnaJ |
| 5018 | MRDG01000020.1 | OOO30856.1 JB | 609 [NA] | 202 [AA] | 558148-558756 | BS628_26240 | peptidase |
| 5019 | MRDG01000020.1 | OOO30857.1 JB | 456 [NA] | 151 [AA] | 558915-559370 | BS628_26245 | photosystem reaction center subunit H |
| 5020 | MRDG01000020.1 | OOO30858.1 JB | 426 [NA] | 141 [AA] | 559534-559959 | BS628_26250 | hypothetical protein |
| 5021 | MRDG01000020.1 | OOO30859.1 JB | 969 [NA] | 322 [AA] | 559988-560956 | BS628_26255 | esterase |
| 5022 | MRDG01000020.1 | OOO30860.1 JB | 600 [NA] | 199 [AA] | 561147-561746 | BS628_26260 | hypothetical protein |
| 5023 | MRDG01000020.1 | OOO30861.1 JB | 354 [NA] | 117 [AA] | 564999-565352 | BS628_26270 | hypothetical protein |
| 5024 | MRDG01000020.1 | OOO30862.1 JB | 423 [NA] | 140 [AA] | 565459-565881 | BS628_26275 | GNAT family N-acetyltransferase |
| 5025 | MRDG01000020.1 | OOO30863.1 JB | 384 [NA] | 127 [AA] | 565999-566382 | BS628_26280 | transcriptional regulator |
| 5026 | MRDG01000020.1 | OOO30864.1 JB | 612 [NA] | 203 [AA] | 566537-567148 | BS628_26285 | 3-beta hydroxysteroid dehydrogenase |
| 5027 | MRDG01000020.1 | OOO30865.1 JB | 477 [NA] | 158 [AA] | 567161-567637 | BS628_26290 | hypothetical protein |
| 5028 | MRDG01000020.1 | OOO30866.1 JB | 1365 [NA] | 454 [AA] | 567706-569070 | BS628_26295 | hypothetical protein |
| 5029 | MRDG01000020.1 | OOO30867.1 JB | 405 [NA] | 134 [AA] | 569118-569522 | BS628_26300 | DUF2946 domain-containing protein |
| 5030 | MRDG01000020.1 | OOO30868.1 JB | 888 [NA] | 295 [AA] | 570169-571056 | BS628_26310 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB |
| 5031 | MRDG01000020.1 | OOO30869.1 JB | 2211 [NA] | 736 [AA] | 571703-573913 | BS628_26325 | histidine kinase |
| 5032 | MRDG01000020.1 | OOO30870.1 JB | 456 [NA] | 151 [AA] | 573906-574361 | BS628_26330 | two-component system response regulator |
| 5033 | MRDG01000020.1 | OOO30871.1 JB | 993 [NA] | 330 [AA] | 574375-575367 | BS628_26335 | histidine kinase |
| 5034 | MRDG01000020.1 | OOO30872.1 JB | 375 [NA] | 124 [AA] | 575421-575795 | BS628_26340 | hypothetical protein |
| 5035 | MRDG01000020.1 | OOO30873.1 JB | 1455 [NA] | 484 [AA] | 576004-577458 | BS628_26345 | histidine kinase |
| 5036 | MRDG01000020.1 | OOO30874.1 JB | 438 [NA] | 145 [AA] | 577455-577892 | BS628_26350 | hypothetical protein |
| 5037 | MRDG01000020.1 | OOO30875.1 JB | 1041 [NA] | 346 [AA] | 577897-578937 | BS628_26355 | two-component system sensor histidine kinase/response regulator |
| 5038 | MRDG01000020.1 | OOO30876.1 JB | 711 [NA] | 236 [AA] | 579023-579733 | BS628_26360 | anti-sigma factor |
| 5039 | MRDG01000020.1 | OOO30877.1 JB | 543 [NA] | 180 [AA] | 579730-580272 | BS628_26365 | RNA polymerase subunit sigma |
| 5040 | MRDG01000020.1 | OOO30878.1 JB | 432 [NA] | 143 [AA] | 580398-580829 | BS628_26370 | hypothetical protein |
| 5041 | MRDG01000020.1 | OOO30879.1 JB | 378 [NA] | 125 [AA] | 580907-581284 | BS628_26375 | hypothetical protein |
| 5042 | MRDG01000020.1 | OOO30880.1 JB | 1233 [NA] | 410 [AA] | 581312-582544 | BS628_26380 | SAM-dependent methyltransferase |
| 5043 | MRDG01000020.1 | OOO30881.1 JB | 819 [NA] | 272 [AA] | 582531-583349 | BS628_26385 | hypothetical protein |
| 5044 | MRDG01000020.1 | OOO30882.1 JB | 1374 [NA] | 457 [AA] | 583346-584719 | BS628_26390 | NAD/FAD-binding protein |
| 5045 | MRDG01000020.1 | OOO30883.1 JB | 789 [NA] | 262 [AA] | 584909-585697 | BS628_26395 | hypothetical protein |
| 5046 | MRDG01000020.1 | OOO30884.1 JB | 1026 [NA] | 341 [AA] | 585694-586719 | BS628_26400 | SAM-dependent methyltransferase |
| 5047 | MRDG01000020.1 | OOO30885.1 JB | 1851 [NA] | 616 [AA] | 587021-588871 | BS628_26405 | multidrug ABC transporter ATP-binding protein |
| 5048 | MRDG01000020.1 | OOO30886.1 JB | 195 [NA] | 64 [AA] | 588930-589124 | BS628_26410 | hypothetical protein |
| 5049 | MRDG01000020.1 | OOO30887.1 JB | 327 [NA] | 108 [AA] | 589242-589568 | BS628_26415 | BA14K family protein |
| 5050 | MRDG01000020.1 | OOO30888.1 JB | 450 [NA] | 149 [AA] | 589866-590315 | BS628_26420 | hypothetical protein |
| 5051 | MRDG01000020.1 | OOO30889.1 JB | 369 [NA] | 122 [AA] | 590967-591335 | BS628_26425 | hypothetical protein |
| 5052 | MRDG01000020.1 | OOO30890.1 JB | 849 [NA] | 282 [AA] | 1152-2000 | BS628_23525 | LysR family transcriptional regulator |
| 5053 | MRDG01000020.1 | OOO30891.1 JB | 432 [NA] | 143 [AA] | 18748-19179 | BS628_23595 | MarR family transcriptional regulator |
| 5054 | MRDG01000020.1 | OOO30892.1 JB | 1041 [NA] | 346 [AA] | 32392-33432 | BS628_23655 | peptidase |
| 5055 | MRDG01000020.1 | OOO30893.1 JB | 1182 [NA] | 393 [AA] | 76393-77574 | BS628_23855 | MFS sugar transporter |
| 5056 | MRDG01000020.1 | OOO30894.1 JB | 261 [NA] | 86 [AA] | 86474-86734 | BS628_23905 | hypothetical protein |
| 5057 | MRDG01000020.1 | OOO30895.1 JB | 1068 [NA] | 355 [AA] | 90356-91423 | BS628_23925 | iron ABC transporter |
| 5058 | MRDG01000020.1 | OOO30896.1 JB | 681 [NA] | 226 [AA] | 91504-92184 | BS628_23930 | DNA-binding response regulator |
| 5059 | MRDG01000020.1 | OOO30897.1 JB | 195 [NA] | 64 [AA] | 95119-95313 | BS628_23955 | hypothetical protein |
| 5060 | MRDG01000020.1 | OOO30898.1 JB | 714 [NA] | 237 [AA] | 102576-103289 | BS628_24015 | uracil-DNA glycosylase |
| 5061 | MRDG01000020.1 | OOO30899.1 JB | 888 [NA] | 295 [AA] | 108461-109348 | BS628_24045 | EamA family transporter |
| 5062 | MRDG01000020.1 | OOO30900.1 JB | 417 [NA] | 138 [AA] | 153876-154292 | BS628_24285 | urease-associated protein |
| 5063 | MRDG01000020.1 | OOO30901.1 JB | 237 [NA] | 78 [AA] | 169852-170088 | BS628_24360 | hypothetical protein |
| 5064 | MRDG01000020.1 | OOO30902.1 JB | 180 [NA] | 59 [AA] | 178268-178447 | BS628_24415 | hypothetical protein |
| 5065 | MRDG01000020.1 | OOO30903.1 JB | 912 [NA] | 303 [AA] | 192178-193089 | BS628_24490 | homocysteine S-methyltransferase |
| 5066 | MRDG01000020.1 | OOO30904.1 JB | 597 [NA] | 198 [AA] | 207786-208382 | BS628_24570 | SAM-dependent methyltransferase |
| 5067 | MRDG01000020.1 | OOO30905.1 JB | 390 [NA] | 129 [AA] | 213843-214232 | BS628_24600 | DoxX family protein |
| 5068 | MRDG01000020.1 | OOO30906.1 JB | 852 [NA] | 283 [AA] | 273223-274074 | BS628_24875 | choline ABC transporter permease subunit |
| 5069 | MRDG01000020.1 | OOO30907.1 JB | 903 [NA] | 300 [AA] | 279305-280207 | BS628_24910 | cation-efflux pump |
| 5070 | MRDG01000020.1 | OOO30908.1 JB | 993 [NA] | 330 [AA] | 291072-292064 | BS628_24975 | glutathione-dependent reductase |
| 5071 | MRDG01000020.1 | OOO30909.1 JB | 1869 [NA] | 622 [AA] | 314474-316342 | BS628_25085 | multidrug ABC transporter ATP-binding protein |
| 5072 | MRDG01000020.1 | OOO30910.1 JB | 312 [NA] | 103 [AA] | 324802-325113 | BS628_25140 | ATP-dependent Clp protease adaptor ClpS |
| 5073 | MRDG01000020.1 | OOO30911.1 JB | 714 [NA] | 237 [AA] | 326399-327112 | BS628_25155 | ABC transporter substrate-binding protein |
| 5074 | MRDG01000020.1 | OOO30912.1 JB | 960 [NA] | 319 [AA] | 332920-333879 | BS628_25175 | Fis family transcriptional regulator |
| 5075 | MRDG01000020.1 | OOO30913.1 JB | 813 [NA] | 270 [AA] | 347072-347884 | BS628_25235 | prolipoprotein diacylglyceryl transferase |
| 5076 | MRDG01000020.1 | OOO30914.1 JB | 528 [NA] | 175 [AA] | 352703-353230 | BS628_25270 | MarR family transcriptional regulator |
| 5077 | MRDG01000020.1 | OOO30915.1 JB | 291 [NA] | 96 [AA] | 365039-365329 | BS628_25340 | transcriptional regulator |
| 5078 | MRDG01000020.1 | OOO30916.1 JB | 897 [NA] | 298 [AA] | 365930-366826 | BS628_25345 | LysR family transcriptional regulator |
| 5079 | MRDG01000020.1 | OOO30917.1 JB | 489 [NA] | 162 [AA] | 379382-379870 | BS628_25400 | hypothetical protein |
| 5080 | MRDG01000020.1 | OOO30918.1 JB | 921 [NA] | 306 [AA] | 394089-395009 | BS628_25465 | hypothetical protein |
| 5081 | MRDG01000020.1 | OOO30919.1 JB | 561 [NA] | 186 [AA] | 402519-403079 | BS628_25510 | tyrosine protein phosphatase |
| 5082 | MRDG01000020.1 | OOO30920.1 JB | 777 [NA] | 258 [AA] | 409905-410681 | BS628_25530 | ABC transporter permease |
| 5083 | MRDG01000020.1 | OOO30921.1 JB | 1212 [NA] | 403 [AA] | 447832-449043 | BS628_25710 | pyrophosphate--fructose-6-phosphate 1-phosphotransferase |
| 5084 | MRDG01000020.1 | OOO30922.1 JB | 777 [NA] | 258 [AA] | 471659-472435 | BS628_25825 | GGDEF domain-containing protein |
| 5085 | MRDG01000020.1 | OOO30923.1 JB | 924 [NA] | 307 [AA] | 475297-476220 | BS628_25840 | cell division protein FtsQ |
| 5086 | MRDG01000020.1 | OOO30924.1 JB | 960 [NA] | 319 [AA] | 479669-480628 | BS628_25855 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
| 5087 | MRDG01000020.1 | OOO30925.1 JB | 930 [NA] | 309 [AA] | 487387-488316 | BS628_25885 | EamA family transporter |
| 5088 | MRDG01000020.1 | OOO30926.1 JB | 627 [NA] | 208 [AA] | 497256-497882 | BS628_25950 | nicotinamidase |
| 5089 | MRDG01000020.1 | OOO30927.1 JB | 2475 [NA] | 824 [AA] | 501767-504241 | BS628_25975 | ATP-dependent DNA helicase |
| 5090 | MRDG01000020.1 | OOO30928.1 JB | 1977 [NA] | 658 [AA] | 525664-527640 | BS628_26075 | ATPase |
| 5091 | MRDG01000020.1 | OOO30929.1 JB | 699 [NA] | 232 [AA] | 537119-537817 | BS628_26140 | LuxR family transcriptional regulator |
| 5092 | MRDG01000020.1 | OOO30930.1 JB | 756 [NA] | 251 [AA] | 538053-538808 | BS628_26145 | pyridoxine 5'-phosphate synthase |
| 5093 | MRDG01000020.1 | OOO30931.1 JB | 2967 [NA] | 988 [AA] | 561766-564732 | BS628_26265 | excinuclease ABC subunit B |
| 5094 | MRDG01000020.1 | OOO30932.1 JB | 393 [NA] | 130 [AA] | 569700-570092 | BS628_26305 | acyl-CoA thioesterase |
| 5095 | MRDG01000020.1 | OOO30933.1 JB | 633 [NA] | 210 [AA] | 591806-592438 | BS628_26430 | hypothetical protein |
| 5096 | MRDG01000021.1 | OOO29827.1 JB | 2100 [NA] | 699 [AA] | 147-2246 | BS628_26435 | translation elongation factor G |
| 5097 | MRDG01000021.1 | OOO29828.1 JB | 471 [NA] | 156 [AA] | 2281-2751 | BS628_26440 | 30S ribosomal protein S7 |
| 5098 | MRDG01000021.1 | OOO29829.1 JB | 372 [NA] | 123 [AA] | 2829-3200 | BS628_26445 | 30S ribosomal protein S12 |
| 5099 | MRDG01000021.1 | OOO29830.1 JB | 294 [NA] | 97 [AA] | 3727-4020 | BS628_26450 | transcriptional regulator |
| 5100 | MRDG01000021.1 | OOO29831.1 JB | 351 [NA] | 116 [AA] | 4032-4382 | BS628_26455 | glyoxalase |
| 5101 | MRDG01000021.1 | OOO29832.1 JB | 1116 [NA] | 371 [AA] | 4451-5566 | BS628_26460 | LuxR family transcriptional regulator |
| 5102 | MRDG01000021.1 | OOO29833.1 JB | 4209 [NA] | 1402 [AA] | 5721-9929 | BS628_26465 | DNA-directed RNA polymerase subunit beta' |
| 5103 | MRDG01000021.1 | OOO29834.1 JB | 4137 [NA] | 1378 [AA] | 10111-14247 | BS628_26470 | DNA-directed RNA polymerase subunit beta |
| 5104 | MRDG01000021.1 | OOO29835.1 JB | 378 [NA] | 125 [AA] | 14511-14888 | BS628_26475 | 50S ribosomal protein L7/L12 |
| 5105 | MRDG01000021.1 | OOO29836.1 JB | 519 [NA] | 172 [AA] | 14948-15466 | BS628_26480 | 50S ribosomal protein L10 |
| 5106 | MRDG01000021.1 | OOO29837.1 JB | 696 [NA] | 231 [AA] | 15822-16517 | BS628_26485 | 50S ribosomal protein L1 |
| 5107 | MRDG01000021.1 | OOO29838.1 JB | 432 [NA] | 143 [AA] | 16520-16951 | BS628_26490 | 50S ribosomal protein L11 |
| 5108 | MRDG01000021.1 | OOO29839.1 JB | 531 [NA] | 176 [AA] | 17096-17626 | BS628_26495 | transcription termination/antitermination protein NusG |
| 5109 | MRDG01000021.1 | OOO29840.1 JB | 201 [NA] | 66 [AA] | 17650-17850 | BS628_26500 | preprotein translocase subunit SecE |
| 5110 | MRDG01000021.1 | OOO29841.1 JB | 894 [NA] | 297 [AA] | 18235-19128 | BS628_26510 | nucleoside-diphosphate-sugar epimerase |
| 5111 | MRDG01000021.1 | OOO29842.1 JB | 69 [NA] | 22 [AA] | 19271-19339 | BS628_26515 | hypothetical protein |
| 5112 | MRDG01000022.1 | OOO29675.1 JB | 194 [NA] | 64 [AA] | <1-194 | BS628_26520 | sugar ABC transporter ATP-binding protein |
| 5113 | MRDG01000022.1 | OOO29676.1 JB | 825 [NA] | 274 [AA] | 207-1031 | BS628_26525 | sugar ABC transporter permease |
| 5114 | MRDG01000022.1 | OOO29677.1 JB | 831 [NA] | 276 [AA] | 1044->1874 | BS628_26530 | sugar ABC transporter permease |