Genome Explorer: Lacticaseibacillus casei BCRC 80156 (SEQF8782.1)
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NCBI Annotation for SEQF8782.1
| Genome selected: Lacticaseibacillus casei BCRC 80156 | |||
| Contigs: | 147 | Bases: | 2829905 bps |
| CDS: | 277 | rRNA: | 15 |
| tmRNA: | 1 | tRNA: | 56 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2501 | VBWM01000096.1 | TLF31076.1 JB | 327 [NA] | 108 [AA] | 3173-3499 | FEI12_14005 | hypothetical protein |
| 2502 | VBWM01000096.1 | TLF31077.1 JB | 372 [NA] | 123 [AA] | 3775-4146 | FEI12_14010 | ABC transporter ATP-binding protein |
| 2503 | VBWM01000096.1 | TLF31078.1 JB | 987 [NA] | 328 [AA] | 4064-5050 | FEI12_14015 | ABC transporter ATP-binding protein |
| 2504 | VBWM01000097.1 | TLF31022.1 JB | 198 [NA] | 65 [AA] | 247-444 | FEI12_14020 | ComC/BlpC family peptide pheromone/bacteriocin |
| 2505 | VBWM01000097.1 | TLF31023.1 JB | 162 [NA] | 53 [AA] | 473-634 | FEI12_14025 | bacteriocin leader domain-containing protein |
| 2506 | VBWM01000097.1 | TLF31024.1 JB | 222 [NA] | 73 [AA] | 754-975 | FEI12_14030 | hypothetical protein |
| 2507 | VBWM01000097.1 | TLF31025.1 JB | 285 [NA] | 94 [AA] | 1241-1525 | FEI12_14035 | hypothetical protein |
| 2508 | VBWM01000097.1 | TLF31026.1 JB | 807 [NA] | 268 [AA] | 1706-2512 | FEI12_14040 | response regulator transcription factor |
| 2509 | VBWM01000097.1 | TLF31027.1 JB | 1302 [NA] | 433 [AA] | 2514-3815 | FEI12_14045 | sensor histidine kinase |
| 2510 | VBWM01000098.1 | TLF31016.1 JB | 294 [NA] | 97 [AA] | 1247-1540 | FEI12_14060 | phage gp6-like head-tail connector protein |
| 2511 | VBWM01000098.1 | TLF31017.1 JB | 141 [NA] | 46 [AA] | 2338-2478 | FEI12_14070 | hypothetical protein |
| 2512 | VBWM01000098.1 | TLF31018.1 JB | 249 [NA] | 82 [AA] | 2494-2742 | FEI12_14075 | GlsB/YeaQ/YmgE family stress response membrane protein |
| 2513 | VBWM01000098.1 | TLF31019.1 JB | 369 [NA] | 122 [AA] | 2854-3222 | FEI12_14080 | large-conductance mechanosensitive channel protein MscL |
| 2514 | VBWM01000098.1 | TLF31020.1 JB | 492 [NA] | 163 [AA] | 3494-3985 | FEI12_14085 | hypothetical protein |
| 2515 | VBWM01000098.1 | TLF31021.1 JB | 477 [NA] | 158 [AA] | 4182-4658 | FEI12_14090 | GNAT family N-acetyltransferase |
| 2516 | VBWM01000099.1 | TLF31003.1 JB | 144 [NA] | 47 [AA] | 4860->5003 | FEI12_14110 | IS30 family transposase |
| 2517 | VBWM01000100.1 | TLF30948.1 JB | 249 [NA] | 83 [AA] | <1-249 | FEI12_14115 | HNH endonuclease |
| 2518 | VBWM01000100.1 | TLF30949.1 JB | 729 [NA] | 242 [AA] | 449-1177 | FEI12_14120 | hypothetical protein |
| 2519 | VBWM01000100.1 | TLF30950.1 JB | 321 [NA] | 106 [AA] | 1180-1500 | FEI12_14125 | ribonucleoside-diphosphate reductase |
| 2520 | VBWM01000100.1 | TLF30951.1 JB | 531 [NA] | 176 [AA] | 1503-2033 | FEI12_14130 | endonuclease |
| 2521 | VBWM01000100.1 | TLF30952.1 JB | 1149 [NA] | 382 [AA] | 2046-3194 | FEI12_14135 | hypothetical protein |
| 2522 | VBWM01000100.1 | TLF30953.1 JB | 444 [NA] | 147 [AA] | 3553-3996 | FEI12_14145 | transcriptional regulator |
| 2523 | VBWM01000100.1 | TLF30954.1 JB | 420 [NA] | 139 [AA] | 4242-4661 | FEI12_14155 | hypothetical protein |
| 2524 | VBWM01000100.1 | TLF30955.1 JB | 183 [NA] | 60 [AA] | 4658-4840 | FEI12_14160 | hypothetical protein |
| 2525 | VBWM01000100.1 | TLF30956.1 JB | 72 [NA] | 23 [AA] | 4174-4245 | FEI12_14150 | hypothetical protein |
| 2526 | VBWM01000101.1 | TLF30930.1 JB | 139 [NA] | 46 [AA] | <1-139 | FEI12_14165 | transposase |
| 2527 | VBWM01000101.1 | TLF30931.1 JB | 1983 [NA] | 660 [AA] | 207-2189 | FEI12_14170 | phage tail protein |
| 2528 | VBWM01000101.1 | TLF30932.1 JB | 2619 [NA] | 872 [AA] | 2190->4810 | FEI12_14175 | phage tail protein |
| 2529 | VBWM01000102.1 | TLF30891.1 JB | 264 [NA] | 87 [AA] | <1-266 | FEI12_14180 | IS5/IS1182 family transposase |
| 2530 | VBWM01000102.1 | TLF30892.1 JB | 225 [NA] | 74 [AA] | 397-621 | FEI12_14185 | hypothetical protein |
| 2531 | VBWM01000102.1 | TLF30893.1 JB | 2946 [NA] | 981 [AA] | 712-3657 | FEI12_14190 | YhgE/Pip domain-containing protein |
| 2532 | VBWM01000102.1 | TLF30894.1 JB | 570 [NA] | 189 [AA] | 3665-4234 | FEI12_14195 | TetR/AcrR family transcriptional regulator |
| 2533 | VBWM01000102.1 | TLF30895.1 JB | 144 [NA] | 47 [AA] | 4489->4632 | FEI12_14200 | IS30 family transposase |
| 2534 | VBWM01000103.1 | TLF30872.1 JB | 456 [NA] | 151 [AA] | 55-510 | FEI12_14205 | ATP-binding cassette domain-containing protein |
| 2535 | VBWM01000103.1 | TLF30873.1 JB | 495 [NA] | 164 [AA] | 503-997 | FEI12_14210 | hypothetical protein |
| 2536 | VBWM01000103.1 | TLF30874.1 JB | 798 [NA] | 265 [AA] | 1134-1931 | FEI12_14220 | hypothetical protein |
| 2537 | VBWM01000103.1 | TLF30875.1 JB | 678 [NA] | 225 [AA] | 2598-3275 | FEI12_14230 | hypothetical protein |
| 2538 | VBWM01000103.1 | TLF30876.1 JB | 384 [NA] | 127 [AA] | 2179-2562 | FEI12_14225 | hypothetical protein |
| 2539 | VBWM01000104.1 | TLF30870.1 JB | 1515 [NA] | 504 [AA] | 170-1684 | FEI12_14240 | hypothetical protein |
| 2540 | VBWM01000104.1 | TLF30871.1 JB | 2835 [NA] | 944 [AA] | 1685->4519 | FEI12_14245 | phage tail protein |
| 2541 | VBWM01000105.1 | TLF30835.1 JB | 144 [NA] | 47 [AA] | <1-144 | FEI12_14250 | IS30 family transposase |
| 2542 | VBWM01000105.1 | TLF30836.1 JB | 696 [NA] | 231 [AA] | 284-979 | FEI12_14255 | hypothetical protein |
| 2543 | VBWM01000105.1 | TLF30837.1 JB | 303 [NA] | 100 [AA] | 1308-1610 | FEI12_14260 | hypothetical protein |
| 2544 | VBWM01000105.1 | TLF30838.1 JB | 1608 [NA] | 535 [AA] | 1607-3214 | FEI12_14265 | ABC transporter ATP-binding protein |
| 2545 | VBWM01000105.1 | TLF30839.1 JB | 1062 [NA] | 353 [AA] | 3357-4418 | FEI12_14270 | IS30 family transposase |
| 2546 | VBWM01000106.1 | TLF30820.1 JB | 171 [NA] | 56 [AA] | <1-172 | FEI12_14275 | transposase |
| 2547 | VBWM01000106.1 | TLF30821.1 JB | 345 [NA] | 114 [AA] | 326-670 | FEI12_14280 | replication and copy control-associated protein |
| 2548 | VBWM01000106.1 | TLF30822.1 JB | 816 [NA] | 271 [AA] | 673-1488 | FEI12_14285 | ParA family protein |
| 2549 | VBWM01000106.1 | TLF30823.1 JB | 1482 [NA] | 493 [AA] | 2033-3514 | FEI12_14290 | RepR protein |
| 2550 | VBWM01000107.1 | TLF30803.1 JB | 558 [NA] | 185 [AA] | 519-1076 | FEI12_14305 | serine acetyltransferase |
| 2551 | VBWM01000107.1 | TLF30804.1 JB | 1185 [NA] | 394 [AA] | 1042-2226 | FEI12_14310 | aminotransferase class V-fold PLP-dependent enzyme |
| 2552 | VBWM01000107.1 | TLF30805.1 JB | 912 [NA] | 303 [AA] | 2268-3179 | FEI12_14315 | cysteine synthase family protein |
| 2553 | VBWM01000107.1 | TLF30806.1 JB | 139 [NA] | 46 [AA] | 3677->3815 | FEI12_14320 | transposase |
| 2554 | VBWM01000108.1 | TLF30763.1 JB | 321 [NA] | 106 [AA] | 537-857 | FEI12_14335 | thioredoxin family protein |
| 2555 | VBWM01000108.1 | TLF30764.1 JB | 777 [NA] | 258 [AA] | 854-1630 | FEI12_14340 | threonine/serine exporter family protein |
| 2556 | VBWM01000109.1 | TLF30761.1 JB | 276 [NA] | 91 [AA] | 3253->3528 | FEI12_14365 | IS30 family transposase |
| 2557 | VBWM01000109.1 | TLF30762.1 JB | 2703 [NA] | 900 [AA] | 426-3128 | FEI12_14360 | family 15 glucoamylase |
| 2558 | VBWM01000110.1 | TLF30743.1 JB | 144 [NA] | 47 [AA] | <1-144 | FEI12_14370 | IS30 family transposase |
| 2559 | VBWM01000110.1 | TLF30744.1 JB | 786 [NA] | 261 [AA] | 307-1092 | FEI12_14375 | hypothetical protein |
| 2560 | VBWM01000110.1 | TLF30745.1 JB | 501 [NA] | 166 [AA] | 1422-1922 | FEI12_14380 | hypothetical protein |
| 2561 | VBWM01000110.1 | TLF30746.1 JB | 1182 [NA] | 393 [AA] | 2040-3221 | FEI12_14385 | LysM peptidoglycan-binding domain-containing protein |
| 2562 | VBWM01000110.1 | TLF30747.1 JB | 243 [NA] | 80 [AA] | 3232->3476 | FEI12_14390 | phage holin |
| 2563 | VBWM01000112.1 | TLF30696.1 JB | 243 [NA] | 80 [AA] | 330-572 | FEI12_14415 | type II toxin-antitoxin system RelB/DinJ family antitoxin |
| 2564 | VBWM01000112.1 | TLF30697.1 JB | 282 [NA] | 93 [AA] | 565-846 | FEI12_14420 | type II toxin-antitoxin system YafQ family toxin |
| 2565 | VBWM01000112.1 | TLF30698.1 JB | 369 [NA] | 122 [AA] | 1112-1480 | FEI12_14430 | YxeA family protein |
| 2566 | VBWM01000112.1 | TLF30699.1 JB | 651 [NA] | 216 [AA] | 1556-2206 | FEI12_14435 | recombinase family protein |
| 2567 | VBWM01000112.1 | TLF30700.1 JB | 285 [NA] | 94 [AA] | 2212-2496 | FEI12_14440 | cytosolic protein |
| 2568 | VBWM01000112.1 | TLF30701.1 JB | 323 [NA] | 107 [AA] | 3031->3353 | FEI12_14445 | hypothetical protein |
| 2569 | VBWM01000113.1 | TLF30681.1 JB | 144 [NA] | 47 [AA] | <1-144 | FEI12_14450 | IS30 family transposase |
| 2570 | VBWM01000113.1 | TLF30682.1 JB | 267 [NA] | 88 [AA] | 1043-1309 | FEI12_14460 | helix-turn-helix transcriptional regulator |
| 2571 | VBWM01000113.1 | TLF30683.1 JB | 414 [NA] | 137 [AA] | 2405-2818 | FEI12_14470 | NUDIX domain-containing protein |
| 2572 | VBWM01000114.1 | TLF30636.1 JB | 171 [NA] | 56 [AA] | <1-172 | FEI12_14480 | transposase |
| 2573 | VBWM01000114.1 | TLF30637.1 JB | 888 [NA] | 295 [AA] | 1191-2078 | FEI12_14490 | sugar transporter |
| 2574 | VBWM01000114.1 | TLF30638.1 JB | 789 [NA] | 262 [AA] | 2287-3074 | FEI12_14500 | IS5 family transposase |
| 2575 | VBWM01000115.1 | TLF30634.1 JB | 192 [NA] | 63 [AA] | <1-193 | FEI12_14505 | IS30 family transposase |
| 2576 | VBWM01000115.1 | TLF30635.1 JB | 1143 [NA] | 380 [AA] | 458-1600 | FEI12_14510 | glycosyltransferase family 4 protein |
| 2577 | VBWM01000116.1 | TLF30588.1 JB | 610 [NA] | 203 [AA] | <1-610 | FEI12_14525 | phage tail protein |
| 2578 | VBWM01000116.1 | TLF30589.1 JB | 372 [NA] | 123 [AA] | 622-993 | FEI12_14530 | DUF806 family protein |
| 2579 | VBWM01000116.1 | TLF30590.1 JB | 420 [NA] | 139 [AA] | 990-1409 | FEI12_14535 | HK97 gp10 family phage protein |
| 2580 | VBWM01000116.1 | TLF30591.1 JB | 345 [NA] | 114 [AA] | 1412-1756 | FEI12_14540 | head-tail adaptor protein |
| 2581 | VBWM01000116.1 | TLF30592.1 JB | 345 [NA] | 114 [AA] | 1746-2090 | FEI12_14545 | phage gp6-like head-tail connector protein |
| 2582 | VBWM01000117.1 | TLF30574.1 JB | 294 [NA] | 98 [AA] | <1-294 | FEI12_14550 | hypothetical protein |
| 2583 | VBWM01000117.1 | TLF30575.1 JB | 132 [NA] | 43 [AA] | 325-456 | FEI12_14555 | XkdX family protein |
| 2584 | VBWM01000117.1 | TLF30576.1 JB | 291 [NA] | 96 [AA] | 449-739 | FEI12_14560 | hypothetical protein |
| 2585 | VBWM01000117.1 | TLF30577.1 JB | 1452 [NA] | 483 [AA] | 749->2200 | FEI12_14565 | phage tail protein |
| 2586 | VBWM01000118.1 | TLF30563.1 JB | 90 [NA] | 29 [AA] | 726-815 | FEI12_14580 | hypothetical protein |
| 2587 | VBWM01000118.1 | TLF30564.1 JB | 792 [NA] | 263 [AA] | 1002-1793 | FEI12_14585 | restriction endonuclease subunit S |
| 2588 | VBWM01000118.1 | TLF30565.1 JB | 144 [NA] | 47 [AA] | 1960->2103 | FEI12_14590 | IS30 family transposase |
| 2589 | VBWM01000119.1 | TLF30526.1 JB | 1680 [NA] | 559 [AA] | 190-1869 | FEI12_14600 | D-lactate dehydrogenase |
| 2590 | VBWM01000120.1 | TLF30524.1 JB | 1194 [NA] | 397 [AA] | 514-1707 | FEI12_14610 | FtsX-like permease family protein |
| 2591 | VBWM01000120.1 | TLF30525.1 JB | 231 [NA] | 77 [AA] | 1818->2048 | FEI12_14615 | transposase |
| 2592 | VBWM01000121.1 | TLF30511.1 JB | 105 [NA] | 34 [AA] | <1-106 | FEI12_14620 | IS30 family transposase |
| 2593 | VBWM01000121.1 | TLF30512.1 JB | 186 [NA] | 61 [AA] | 599-784 | FEI12_14630 | DUF2273 domain-containing protein |
| 2594 | VBWM01000121.1 | TLF30513.1 JB | 522 [NA] | 173 [AA] | 812-1333 | FEI12_14635 | Asp23/Gls24 family envelope stress response protein |
| 2595 | VBWM01000121.1 | TLF30514.1 JB | 252 [NA] | 83 [AA] | 1348-1599 | FEI12_14640 | GlsB/YeaQ/YmgE family stress response membrane protein |
| 2596 | VBWM01000121.1 | TLF30515.1 JB | 141 [NA] | 46 [AA] | 1611-1751 | FEI12_14645 | hypothetical protein |
| 2597 | VBWM01000122.1 | TLF30463.1 JB | 1233 [NA] | 410 [AA] | 139-1371 | FEI12_14655 | IS110 family transposase |
| 2598 | VBWM01000124.1 | TLF30452.1 JB | 678 [NA] | 225 [AA] | 70-747 | FEI12_14665 | transposase |
| 2599 | VBWM01000124.1 | TLF30453.1 JB | 894 [NA] | 297 [AA] | 744-1637 | FEI12_14670 | IS3 family transposase |
| 2600 | VBWM01000125.1 | TLF30450.1 JB | 396 [NA] | 131 [AA] | <1-396 | FEI12_14675 | DDE-type integrase/transposase/recombinase |
| 2601 | VBWM01000125.1 | TLF30451.1 JB | 546 [NA] | 181 [AA] | 1112->1657 | FEI12_14685 | DUF475 domain-containing protein |
| 2602 | VBWM01000127.1 | TLF30412.1 JB | 192 [NA] | 63 [AA] | <1-193 | FEI12_14705 | IS30 family transposase |
| 2603 | VBWM01000127.1 | TLF30413.1 JB | 837 [NA] | 278 [AA] | 320-1156 | FEI12_14710 | TIGR02391 family protein |
| 2604 | VBWM01000128.1 | TLF30401.1 JB | 144 [NA] | 47 [AA] | <1-144 | FEI12_14720 | IS30 family transposase |
| 2605 | VBWM01000128.1 | TLF30402.1 JB | 786 [NA] | 261 [AA] | 439-1224 | FEI12_14725 | SHOCT domain-containing protein |
| 2606 | VBWM01000128.1 | TLF30403.1 JB | 144 [NA] | 47 [AA] | 1407->1550 | FEI12_14730 | IS30 family transposase |
| 2607 | VBWM01000131.1 | TLF30367.1 JB | 141 [NA] | 46 [AA] | <1-141 | FEI12_14745 | IS30 family transposase |
| 2608 | VBWM01000131.1 | TLF30368.1 JB | 714 [NA] | 237 [AA] | 420-1133 | FEI12_14750 | LexA family transcriptional regulator |
| 2609 | VBWM01000131.1 | TLF30369.1 JB | 144 [NA] | 47 [AA] | 1289->1432 | FEI12_14755 | IS30 family transposase |
| 2610 | VBWM01000132.1 | TLF30330.1 JB | 249 [NA] | 82 [AA] | 476-724 | FEI12_14760 | GlsB/YeaQ/YmgE family stress response membrane protein |
| 2611 | VBWM01000132.1 | TLF30331.1 JB | 94 [NA] | 31 [AA] | 1297->1390 | FEI12_14770 | IS5/IS1182 family transposase |
| 2612 | VBWM01000135.1 | TLF30285.1 JB | 1245 [NA] | 414 [AA] | <1-1245 | FEI12_14790 | phage tail protein |
| 2613 | VBWM01000136.1 | TLF30275.1 JB | 105 [NA] | 34 [AA] | <1-105 | FEI12_14795 | IS30 family transposase |
| 2614 | VBWM01000136.1 | TLF30276.1 JB | 144 [NA] | 47 [AA] | 1115->1258 | FEI12_14805 | IS30 family transposase |
| 2615 | VBWM01000137.1 | TLF30242.1 JB | 1137 [NA] | 378 [AA] | 72->1209 | FEI12_14810 | ISL3 family transposase |
| 2616 | VBWM01000139.1 | TLF30234.1 JB | 144 [NA] | 47 [AA] | <1-144 | FEI12_14825 | IS30 family transposase |
| 2617 | VBWM01000139.1 | TLF30235.1 JB | 420 [NA] | 139 [AA] | 295-714 | FEI12_14830 | DUF2992 family protein |
| 2618 | VBWM01000140.1 | TLF30222.1 JB | 180 [NA] | 59 [AA] | <1-181 | FEI12_14835 | hypothetical protein |
| 2619 | VBWM01000140.1 | TLF30223.1 JB | 330 [NA] | 109 [AA] | 183-512 | FEI12_14840 | hypothetical protein |
| 2620 | VBWM01000140.1 | TLF30224.1 JB | 126 [NA] | 41 [AA] | 509-634 | FEI12_14845 | XkdX family protein |
| 2621 | VBWM01000140.1 | TLF30225.1 JB | 294 [NA] | 98 [AA] | 683->976 | FEI12_14850 | hypothetical protein |
| 2622 | VBWM01000141.1 | TLF30191.1 JB | 192 [NA] | 63 [AA] | 715->907 | FEI12_14865 | IS30 family transposase |
| 2623 | VBWM01000142.1 | TLF30190.1 JB | 772 [NA] | 257 [AA] | 111->882 | FEI12_14870 | IS30 family transposase |
| 2624 | VBWM01000143.1 | TLF30185.1 JB | 698 [NA] | 233 [AA] | 76->773 | FEI12_14875 | helix-turn-helix domain-containing protein |
| 2625 | VBWM01000144.1 | TLF30169.1 JB | 771 [NA] | 256 [AA] | 2->772 | FEI12_14880 | integrase |
| 2626 | VBWM01000145.1 | TLF30164.1 JB | 249 [NA] | 82 [AA] | 326-574 | FEI12_14885 | hypothetical protein |
| 2627 | VBWM01000146.1 | TLF30158.1 JB | 373 [NA] | 124 [AA] | 238->610 | FEI12_14890 | transposase |
| 2628 | VBWM01000147.1 | TLF30128.1 JB | 589 [NA] | 196 [AA] | <1->590 | FEI12_14895 | IS30 family transposase |