HOMD ::klass::Bacilli

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HOMD-v2
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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Class: Bacilli

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Full Lineage: Bacteria; Firmicutes; Bacilli
Lower rank member(s): [Order:Lactobacillales] [Order:Bacillales]
Genera:

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From: Segata et al.(2012)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	13.091	15.933	54.861	61.124	48.371	15.161	29.254	27.579	23.273	0.182
Stdev	10.603	10.210	19.453	16.498	18.300	8.585	18.901	19.276	14.800	1.223

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	17.825	20.232	69.580	70.649	59.595	20.399	34.130	35.699	29.756	0.077
10^thp	6.171	8.619	43.284	46.764	36.536	5.571	11.508	9.769	11.693	0.000
90^thp	32.161	34.838	91.271	92.283	83.079	35.347	60.776	69.085	49.709	0.224
Stdev	13.300	10.654	17.947	16.375	17.574	11.750	19.942	22.718	14.700	0.107
Prev	100.000	100.000	100.000	100.000	100.000	98.701	100.000	100.000	100.000	67.532

From: Eren et al.(2014) (V3-V5)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	12.519	16.575	52.471	60.702	47.939	16.165	30.848	27.554	25.125	0.036
10^thp	2.710	5.627	28.501	36.215	25.324	6.471	8.454	8.234	8.144	0.000
90^thp	28.058	32.969	77.575	82.701	73.180	27.556	59.306	53.503	46.085	0.110
Stdev	9.826	11.159	18.448	17.407	17.958	8.657	18.859	17.712	15.082	0.068
Prev	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	48.252

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	NS
Avg	22.279	32.972	63.343	63.041	53.578	47.927	43.076	42.581	45.228	16.617
10^thp	3.760	17.941	34.343	36.358	33.330	21.569	23.370	18.333	22.801	2.210
90^thp	48.820	54.940	91.788	88.198	79.193	78.338	64.597	68.292	76.906	32.736
Stdev	16.571	14.762	23.426	19.131	19.866	22.522	16.673	20.626	21.544	23.932
Prev	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000