Species: Acidovorax temperans (HMT-216)
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Eren V1-V3 www.pnas.org
(data from healthy subjects)
No Notes
Eren V3-V5 www.pnas.org
(data from healthy subjects)
No Notes
Human Microbiome Project 16S RefSeq (V1-V3) (not published)
(data from healthy subjects)
Notes:
Reads equidistant to Staphylococcus aureus, Acidovorax temperans, and Corynebacterium diphtheriae were assigned to Staphylococcus aureus at this body site (ANA).
Some of the reads equidistant from these taxa (216-550-591) are included in HMT-216 because they are too close to differentiate at these sites (ANA,LAF,LRC,RAF,RRC,THR).
HMTs 216-550-591 were not present singularly so these reads were split evenly at these sites (PTO,SUPP)
Reads equidistant to Staphylococcus aureus, Acidovorax temperans, and Corynebacterium diphtheriae were assigned to Staphylococcus aureus at this body site (ANA).
Some of the reads equidistant from these taxa (216-550-591) are included in HMT-216 because they are too close to differentiate at these sites (ANA,LAF,LRC,RAF,RRC,THR).
HMTs 216-550-591 were not present singularly so these reads were split evenly at these sites (PTO,SUPP)
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.000 | 0.000 | 0.000 | 0.010 | 0.000 | 0.000 | 0.022 | 0.002 | 0.000 | 2.867 | 0.055 | 0.044 | 0.177 | 0.128 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.000 | 0.010 | 0.000 | 0.000 | 0.026 | 0.003 | 0.000 | 9.960 | 0.043 | 0.030 | 0.142 | 0.285 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.000 | 0.003 | 0.000 | 0.062 | 0.000 | 0.000 | 0.128 | 0.008 | 0.000 | 7.139 | 0.353 | 0.374 | 1.105 | 0.553 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 0.000 | 1.987 | 0.000 | 11.644 | 0.000 | 0.000 | 15.476 | 11.333 | 0.000 | 39.667 | 22.701 | 22.663 | 25.862 | 28.571 | 0.000 | 0.000 | 0.000 | 0.000 |
Human Microbiome Project 16S RefSeq (V3-V5) (not published)
(data from healthy subjects)
No Notes
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.001 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 2.703 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 6.061 | 0.000 | 0.000 | 0.000 |
Human Microbiome Project Metaphlan (not published)
(data from healthy subjects)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.012 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.000 | 0.000 | 0.000 | 0.000 | 0.003 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.099 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 0.000 | 0.000 | 0.000 | 0.000 | 1.064 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 2.252 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
