Species: Haemophilus sp._HMT_259
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BM - Buccal Mucosa
KG - Keratinized Gingiva
HP - Hard Palate
TD - Tongue Dorsum
PT - Palatine Tonsils
TH - Throat
SV - Saliva
SupP - Supra-gingival Plaque
SubP - Sub-gingival Plaque
NS - Nasal
ST - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
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Notes:
Reads equally close to H. aegyptius, H. influenzae, and H. sp. HMT 259 were assigned one-third to each taxon.
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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Avg | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.002 | 0.087 | 0.006 | 0.000 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.002 | 0.016 | 0.000 | 0.000 |
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Stdev | 0.001 | 0.001 | 0.000 | 0.002 | 0.000 | 0.008 | 0.960 | 0.022 | 0.001 | 0.000 |
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Prev | 1.351 | 1.351 | 0.676 | 2.703 | 0.000 | 8.784 | 10.811 | 15.541 | 2.027 | 0.000 |
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From: Dewhirst 35x9 data (not published yet)
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Notes:
Reads equally close to HMT 259 and 851 were assigned half to each taxon.
Reads equally close to HMT 259, 535, and 641 were assigned one-third to each taxon.
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | NS |
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Avg | 0.004 | 0.004 | 0.092 | 0.020 | 0.005 | 0.002 | 0.007 | 0.008 | 0.016 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.004 | 0.003 | 0.299 | 0.070 | 0.014 | 0.008 | 0.006 | 0.011 | 0.013 | 0.000 |
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Stdev | 0.022 | 0.017 | 0.226 | 0.043 | 0.008 | 0.004 | 0.030 | 0.020 | 0.075 | 0.000 |
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Prev | 25.714 | 17.647 | 72.222 | 52.941 | 46.429 | 25.000 | 42.424 | 45.161 | 8.824 | 0.000 |
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