Species: Prevotella scopos (HMT-885)
Download Options
Hide Legend
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Eren V1-V3 www.pnas.org
(data from healthy subjects)
No Notes
Eren V3-V5 www.pnas.org
(data from healthy subjects)
Notes:
Reads equally close to P. melaninogenica, P. scopos, and P. sp. HMT 313 and 314 were assigned one-fourth to each taxon.
Reads equally close to P. melaninogenica, P. scopos, and P. sp. HMT 313 and 314 were assigned one-fourth to each taxon.
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.121 | 0.051 | 0.052 | 0.187 | 0.874 | 1.023 | 0.989 | 0.761 | 1.324 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.009 | 0.091 | 0.228 | 0.096 | 0.063 | 0.133 | 0.000 |
| 90thp | 0.290 | 0.161 | 0.132 | 0.453 | 2.048 | 2.194 | 2.058 | 1.772 | 2.831 | 0.000 |
| Stdev | 0.343 | 0.101 | 0.161 | 0.303 | 0.928 | 0.927 | 1.048 | 0.858 | 1.219 | 0.000 |
| Prev(%) | 63.514 | 61.486 | 54.730 | 93.243 | 97.297 | 99.324 | 96.622 | 97.297 | 98.649 | 0.699 |
Human Microbiome Project 16S RefSeq (V1-V3) (not published)
(data from healthy subjects)
Notes:
Reads equidistant to HMT-469 and HMT-885 were assigned to each taxon in proportion to the abundance of HMT-469 and HMT-885 individually at this body site (TDO).
Reads equidistant to HMT-469 and HMT-885 were assigned to each taxon in proportion to the abundance of HMT-469 and HMT-885 individually at this body site (TDO).
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.000 | 0.000 | 0.000 | 0.000 | 0.047 | 0.067 | 0.030 | 0.020 | 0.030 | 0.000 | 0.000 | 0.000 | 0.000 | 0.007 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.105 | 0.193 | 0.055 | 0.049 | 0.097 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.000 | 0.000 | 0.000 | 0.000 | 0.163 | 0.281 | 0.111 | 0.065 | 0.095 | 0.000 | 0.000 | 0.000 | 0.000 | 0.084 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 0.000 | 0.000 | 0.000 | 0.000 | 23.490 | 22.308 | 17.857 | 22.000 | 24.516 | 0.000 | 0.000 | 0.000 | 0.000 | 1.382 | 0.000 | 0.000 | 0.000 | 0.000 |
Human Microbiome Project 16S RefSeq (V3-V5) (not published)
(data from healthy subjects)
Notes:
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.003 | 0.000 | 0.011 | 0.022 | 0.033 | 0.019 | 0.023 | 0.011 | 0.028 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.003 | 0.000 | 0.027 | 0.042 | 0.023 | 0.093 | 0.044 | 0.026 | 0.049 | 0.000 |
| Stdev | 0.015 | 0.000 | 0.031 | 0.065 | 0.146 | 0.044 | 0.064 | 0.022 | 0.087 | 0.000 |
| Prev(%) | 14.865 | 2.941 | 25.581 | 40.000 | 32.143 | 36.000 | 57.576 | 54.839 | 40.000 | 0.000 |
Human Microbiome Project Metaphlan (not published)
(data from healthy subjects)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.000 | 0.000 | 0.000 | 0.000 | 0.011 | 0.140 | 0.035 | 0.050 | 0.019 | 0.055 | 0.001 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.140 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.140 | 0.089 | 0.165 | 0.018 | 0.155 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.000 | 0.000 | 0.000 | 0.000 | 0.055 | 0.000 | 0.087 | 0.133 | 0.084 | 0.167 | 0.019 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 0.000 | 0.000 | 0.000 | 0.000 | 8.777 | 100.000 | 37.500 | 18.750 | 12.000 | 26.995 | 0.450 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
