Genome Explorer: Helicobacter pylori Gambia94/24 (SEQF10149.1)
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PROKKA Annotation for SEQF10149.1
| Genome selected: Helicobacter pylori Gambia94/24 | |||
| Contigs: | 2 | Bases: | 1712468 bps |
| CDS: | 1588 | rRNA: | 4 |
| tmRNA: | 1 | tRNA: | 36 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 1501 | SEQF10149.1_CP002332.1 | SEQF10149.1_01552 JB | 588 [NA] | 195 [AA] | 1617692-1618279 | hypothetical protein | |
| 1502 | SEQF10149.1_CP002332.1 | SEQF10149.1_01553 JB | 1383 [NA] | 460 [AA] | 1618276-1619658 | hypothetical protein | |
| 1503 | SEQF10149.1_CP002332.1 | SEQF10149.1_01554 JB | 1872 [NA] | 623 [AA] | 1619710-1621581 | recG | ATP-dependent DNA helicase RecG |
| 1504 | SEQF10149.1_CP002332.1 | SEQF10149.1_01555 JB | 339 [NA] | 112 [AA] | 1621658-1621996 | hypothetical protein | |
| 1505 | SEQF10149.1_CP002332.1 | SEQF10149.1_01556 JB | 636 [NA] | 211 [AA] | 1622000-1622635 | hypothetical protein | |
| 1506 | SEQF10149.1_CP002332.1 | SEQF10149.1_01557 JB | 753 [NA] | 250 [AA] | 1622632-1623384 | exoA | Exodeoxyribonuclease |
| 1507 | SEQF10149.1_CP002332.1 | SEQF10149.1_01559 JB | 1440 [NA] | 479 [AA] | 1623564-1625003 | hypothetical protein | |
| 1508 | SEQF10149.1_CP002332.1 | SEQF10149.1_01560 JB | 1374 [NA] | 457 [AA] | 1625232-1626605 | dnaA | Chromosomal replication initiator protein DnaA |
| 1509 | SEQF10149.1_CP002332.1 | SEQF10149.1_01561 JB | 543 [NA] | 180 [AA] | 1626757-1627299 | hypothetical protein | |
| 1510 | SEQF10149.1_CP002332.1 | SEQF10149.1_01562 JB | 240 [NA] | 79 [AA] | 1627334-1627573 | putative protein | |
| 1511 | SEQF10149.1_CP002332.1 | SEQF10149.1_01563 JB | 1794 [NA] | 597 [AA] | 1627574-1629367 | glmS | Glutamine--fructose-6-phosphate aminotransferase [isomerizing] |
| 1512 | SEQF10149.1_CP002332.1 | SEQF10149.1_01564 JB | 627 [NA] | 208 [AA] | 1629390-1630016 | thyX | Flavin-dependent thymidylate synthase |
| 1513 | SEQF10149.1_CP002332.1 | SEQF10149.1_01565 JB | 129 [NA] | 42 [AA] | 1630686-1630814 | hypothetical protein | |
| 1514 | SEQF10149.1_CP002332.1 | SEQF10149.1_01566 JB | 612 [NA] | 203 [AA] | 1630975-1631586 | hypothetical protein | |
| 1515 | SEQF10149.1_CP002332.1 | SEQF10149.1_01567 JB | 2454 [NA] | 817 [AA] | 1631592-1634045 | hypothetical protein | |
| 1516 | SEQF10149.1_CP002332.1 | SEQF10149.1_01568 JB | 2976 [NA] | 991 [AA] | 1634114-1637089 | hypothetical protein | |
| 1517 | SEQF10149.1_CP002332.1 | SEQF10149.1_01569 JB | 708 [NA] | 235 [AA] | 1637089-1637796 | hypothetical protein | |
| 1518 | SEQF10149.1_CP002332.1 | SEQF10149.1_01570 JB | 2526 [NA] | 841 [AA] | 1637880-1640405 | btuB_4 | Vitamin B12 transporter BtuB |
| 1519 | SEQF10149.1_CP002332.1 | SEQF10149.1_01571 JB | 969 [NA] | 322 [AA] | 1640980-1641948 | rocF | Arginase |
| 1520 | SEQF10149.1_CP002332.1 | SEQF10149.1_01572 JB | 1143 [NA] | 380 [AA] | 1642153-1643295 | ald | Alanine dehydrogenase |
| 1521 | SEQF10149.1_CP002332.1 | SEQF10149.1_01573 JB | 1098 [NA] | 365 [AA] | 1643563-1644660 | adhA_2 | putative formaldehyde dehydrogenase AdhA |
| 1522 | SEQF10149.1_CP002332.1 | SEQF10149.1_01574 JB | 1722 [NA] | 573 [AA] | 1644793-1646514 | hypothetical protein | |
| 1523 | SEQF10149.1_CP002332.1 | SEQF10149.1_01575 JB | 729 [NA] | 242 [AA] | 1646525-1647253 | hypothetical protein | |
| 1524 | SEQF10149.1_CP002332.1 | SEQF10149.1_01576 JB | 939 [NA] | 312 [AA] | 1647355-1648293 | nadK | NAD kinase |
| 1525 | SEQF10149.1_CP002332.1 | SEQF10149.1_01577 JB | 1569 [NA] | 522 [AA] | 1648314-1649882 | recN | DNA repair protein RecN |
| 1526 | SEQF10149.1_CP002332.1 | SEQF10149.1_01578 JB | 1308 [NA] | 435 [AA] | 1649885-1651192 | hypothetical protein | |
| 1527 | SEQF10149.1_CP002332.1 | SEQF10149.1_01579 JB | 297 [NA] | 98 [AA] | 1651212-1651508 | hypothetical protein | |
| 1528 | SEQF10149.1_CP002332.1 | SEQF10149.1_01580 JB | 978 [NA] | 325 [AA] | 1651662-1652639 | hcpC_3 | Putative beta-lactamase HcpC |
| 1529 | SEQF10149.1_CP002332.1 | SEQF10149.1_01581 JB | 864 [NA] | 287 [AA] | 1652686-1653549 | dinG | 3-5 exonuclease DinG |
| 1530 | SEQF10149.1_CP002332.1 | SEQF10149.1_01582 JB | 654 [NA] | 217 [AA] | 1653527-1654180 | rpe | Ribulose-phosphate 3-epimerase |
| 1531 | SEQF10149.1_CP002332.1 | SEQF10149.1_01583 JB | 873 [NA] | 290 [AA] | 1654251-1655123 | fbp | Fructose-1%2C6-bisphosphatase class 1 |
| 1532 | SEQF10149.1_CP002332.1 | SEQF10149.1_01584 JB | 204 [NA] | 67 [AA] | 1655123-1655326 | hypothetical protein | |
| 1533 | SEQF10149.1_CP002332.1 | SEQF10149.1_01586 JB | 834 [NA] | 277 [AA] | 1655664-1656497 | mboIIR_2 | Type-2 restriction enzyme MboII |
| 1534 | SEQF10149.1_CP002332.1 | SEQF10149.1_01587 JB | 642 [NA] | 213 [AA] | 1656585-1657226 | qseB_2 | Transcriptional regulatory protein QseB |
| 1535 | SEQF10149.1_CP002332.1 | SEQF10149.1_01588 JB | 1068 [NA] | 355 [AA] | 1657405-1658472 | tsf | Elongation factor Ts |
| 1536 | SEQF10149.1_CP002332.1 | SEQF10149.1_01589 JB | 795 [NA] | 264 [AA] | 1658472-1659266 | rpsB | 30S ribosomal protein S2 |
| 1537 | SEQF10149.1_CP002332.1 | SEQF10149.1_01590 JB | 2841 [NA] | 946 [AA] | 1659516-1662356 | recB | RecBCD enzyme subunit RecB |
| 1538 | SEQF10149.1_CP002332.1 | SEQF10149.1_01591 JB | 1317 [NA] | 438 [AA] | 1662380-1663696 | nhaA | Na(+)H(+) antiporter NhaA |
| 1539 | SEQF10149.1_CP002332.1 | SEQF10149.1_01592 JB | 384 [NA] | 127 [AA] | 1663744-1664127 | hypothetical protein | |
| 1540 | SEQF10149.1_CP002332.1 | SEQF10149.1_01593 JB | 1578 [NA] | 525 [AA] | 1664124-1665701 | secD | Protein translocase subunit SecD |
| 1541 | SEQF10149.1_CP002332.1 | SEQF10149.1_01594 JB | 972 [NA] | 323 [AA] | 1665710-1666681 | secF | Protein translocase subunit SecF |
| 1542 | SEQF10149.1_CP002332.1 | SEQF10149.1_01595 JB | 339 [NA] | 112 [AA] | 1666691-1667029 | hypothetical protein | |
| 1543 | SEQF10149.1_CP002332.1 | SEQF10149.1_01596 JB | 2421 [NA] | 806 [AA] | 1667039-1669459 | leuS | Leucine--tRNA ligase |
| 1544 | SEQF10149.1_CP002332.1 | SEQF10149.1_01597 JB | 513 [NA] | 170 [AA] | 1669456-1669968 | hypothetical protein | |
| 1545 | SEQF10149.1_CP002332.1 | SEQF10149.1_01598 JB | 1170 [NA] | 389 [AA] | 1669958-1671127 | folC | Dihydrofolate synthasefolylpolyglutamate synthase |
| 1546 | SEQF10149.1_CP002332.1 | SEQF10149.1_01599 JB | 927 [NA] | 308 [AA] | 1671127-1672053 | hypothetical protein | |
| 1547 | SEQF10149.1_CP002332.1 | SEQF10149.1_01600 JB | 942 [NA] | 313 [AA] | 1672060-1673001 | hypothetical protein | |
| 1548 | SEQF10149.1_CP002332.1 | SEQF10149.1_01601 JB | 315 [NA] | 104 [AA] | 1673016-1673330 | hypothetical protein | |
| 1549 | SEQF10149.1_CP002332.1 | SEQF10149.1_01602 JB | 3006 [NA] | 1001 [AA] | 1673334-1676339 | mfd | Transcription-repair-coupling factor |
| 1550 | SEQF10149.1_CP002332.1 | SEQF10149.1_01603 JB | 504 [NA] | 167 [AA] | 1676464-1676967 | petA | Ubiquinol-cytochrome c reductase iron-sulfur subunit |
| 1551 | SEQF10149.1_CP002332.1 | SEQF10149.1_01604 JB | 1239 [NA] | 412 [AA] | 1676978-1678216 | petB | Cytochrome b |
| 1552 | SEQF10149.1_CP002332.1 | SEQF10149.1_01605 JB | 858 [NA] | 285 [AA] | 1678213-1679070 | hypothetical protein | |
| 1553 | SEQF10149.1_CP002332.1 | SEQF10149.1_01606 JB | 798 [NA] | 265 [AA] | 1679261-1680058 | hypothetical protein | |
| 1554 | SEQF10149.1_CP002332.1 | SEQF10149.1_01607 JB | 327 [NA] | 108 [AA] | 1680063-1680389 | hypothetical protein | |
| 1555 | SEQF10149.1_CP002332.1 | SEQF10149.1_01608 JB | 537 [NA] | 178 [AA] | 1680386-1680922 | cptA_2 | Phosphoethanolamine transferase CptA |
| 1556 | SEQF10149.1_CP002332.1 | SEQF10149.1_01609 JB | 1848 [NA] | 615 [AA] | 1681319-1683166 | penA | putative peptidoglycan D%2CD-transpeptidase PenA |
| 1557 | SEQF10149.1_CP002332.1 | SEQF10149.1_01610 JB | 330 [NA] | 109 [AA] | 1683317-1683646 | fliE | Flagellar hook-basal body complex protein FliE |
| 1558 | SEQF10149.1_CP002332.1 | SEQF10149.1_01611 JB | 486 [NA] | 161 [AA] | 1683774-1684259 | flgC | Flagellar basal-body rod protein FlgC |
| 1559 | SEQF10149.1_CP002332.1 | SEQF10149.1_01612 JB | 423 [NA] | 140 [AA] | 1684273-1684695 | flgB | Flagellar basal body rod protein FlgB |
| 1560 | SEQF10149.1_CP002332.1 | SEQF10149.1_01613 JB | 1167 [NA] | 388 [AA] | 1684901-1686067 | ftsW | putative peptidoglycan glycosyltransferase FtsW |
| 1561 | SEQF10149.1_CP002332.1 | SEQF10149.1_01614 JB | 1008 [NA] | 335 [AA] | 1686087-1687094 | hypothetical protein | |
| 1562 | SEQF10149.1_CP002332.1 | SEQF10149.1_01615 JB | 597 [NA] | 198 [AA] | 1687332-1687928 | ahpC | Alkyl hydroperoxide reductase C |
| 1563 | SEQF10149.1_CP002332.1 | SEQF10149.1_01616 JB | 816 [NA] | 271 [AA] | 1688076-1688891 | metQ | D-methionine-binding lipoprotein MetQ |
| 1564 | SEQF10149.1_CP002332.1 | SEQF10149.1_01617 JB | 1767 [NA] | 588 [AA] | 1689383-1691149 | mrdA | Peptidoglycan D%2CD-transpeptidase MrdA |
| 1565 | SEQF10149.1_CP002332.1 | SEQF10149.1_01618 JB | 444 [NA] | 147 [AA] | 1691130-1691573 | hypothetical protein | |
| 1566 | SEQF10149.1_CP002332.1 | SEQF10149.1_01619 JB | 627 [NA] | 208 [AA] | 1691585-1692211 | engB | GTP-binding protein EngB |
| 1567 | SEQF10149.1_CP002332.1 | SEQF10149.1_01620 JB | 558 [NA] | 185 [AA] | 1692208-1692765 | lptA | Lipopolysaccharide export system protein LptA |
| 1568 | SEQF10149.1_CP002332.1 | SEQF10149.1_01621 JB | 594 [NA] | 197 [AA] | 1692765-1693358 | hypothetical protein | |
| 1569 | SEQF10149.1_CP002332.1 | SEQF10149.1_01622 JB | 495 [NA] | 164 [AA] | 1693333-1693827 | kdsC | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC |
| 1570 | SEQF10149.1_CP002332.1 | SEQF10149.1_01623 JB | 945 [NA] | 314 [AA] | 1693824-1694768 | rlpA | Endolytic peptidoglycan transglycosylase RlpA |
| 1571 | SEQF10149.1_CP002332.1 | SEQF10149.1_01624 JB | 1125 [NA] | 374 [AA] | 1694768-1695892 | hypothetical protein | |
| 1572 | SEQF10149.1_CP002332.1 | SEQF10149.1_01625 JB | 765 [NA] | 254 [AA] | 1695976-1696740 | ycfH | putative metal-dependent hydrolase YcfH |
| 1573 | SEQF10149.1_CP002332.1 | SEQF10149.1_01626 JB | 621 [NA] | 206 [AA] | 1696815-1697435 | ribE | Riboflavin synthase |
| 1574 | SEQF10149.1_CP002332.1 | SEQF10149.1_01627 JB | 273 [NA] | 90 [AA] | 1697436-1697708 | hypothetical protein | |
| 1575 | SEQF10149.1_CP002332.1 | SEQF10149.1_01628 JB | 984 [NA] | 327 [AA] | 1697727-1698710 | metN | Methionine import ATP-binding protein MetN |
| 1576 | SEQF10149.1_CP002332.1 | SEQF10149.1_01629 JB | 648 [NA] | 215 [AA] | 1698712-1699359 | metI | D-methionine transport system permease protein MetI |
| 1577 | SEQF10149.1_CP002332.1 | SEQF10149.1_01630 JB | 432 [NA] | 143 [AA] | 1699549-1699980 | hypothetical protein | |
| 1578 | SEQF10149.1_CP002332.1 | SEQF10149.1_01631 JB | 597 [NA] | 198 [AA] | 1699990-1700586 | hypothetical protein | |
| 1579 | SEQF10149.1_CP002332.1 | SEQF10149.1_01632 JB | 936 [NA] | 311 [AA] | 1700586-1701521 | wecA | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase |
| 1580 | SEQF10149.1_CP002332.1 | SEQF10149.1_01633 JB | 789 [NA] | 262 [AA] | 1701733-1702521 | pdxJ | Pyridoxine 5-phosphate synthase |
| 1581 | SEQF10149.1_CP002332.1 | SEQF10149.1_01634 JB | 924 [NA] | 307 [AA] | 1702523-1703446 | pdxA | 4-hydroxythreonine-4-phosphate dehydrogenase |
| 1582 | SEQF10149.1_CP002332.1 | SEQF10149.1_01635 JB | 1023 [NA] | 340 [AA] | 1703648-1704670 | tsaD | tRNA N6-adenosine threonylcarbamoyltransferase |
| 1583 | SEQF10149.1_CP002332.1 | SEQF10149.1_01636 JB | 789 [NA] | 262 [AA] | 1705549-1706337 | flgG_2 | Flagellar basal-body rod protein FlgG |
| 1584 | SEQF10149.1_CP002332.1 | SEQF10149.1_01637 JB | 432 [NA] | 143 [AA] | 1706436-1706867 | hypothetical protein | |
| 1585 | SEQF10149.1_CP002332.1 | SEQF10149.1_01638 JB | 585 [NA] | 194 [AA] | 1706903-1707487 | hypothetical protein | |
| 1586 | SEQF10149.1_CP002332.1 | SEQF10149.1_01639 JB | 141 [NA] | 46 [AA] | 1708050-1708190 | hypothetical protein | |
| 1587 | SEQF10149.1_CP002332.1 | SEQF10149.1_01640 JB | 762 [NA] | 253 [AA] | 1708277-1709038 | hypothetical protein | |
| 1588 | SEQF10149.1_CP002333.1 | SEQF10149.1_01641 JB | 1611 [NA] | 536 [AA] | 91-1701 | hypothetical protein |