Genome Explorer: Prevotella denticola NCTC13067 (SEQF6689.1)
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NCBI Annotation for SEQF6689.1
| Genome selected: Prevotella denticola NCTC13067 | |||
| Contigs: | 3 | Bases: | 3171703 bps |
| CDS: | 2568 | rRNA: | 14 |
| tmRNA: | 1 | tRNA: | 53 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2501 | UGTM01000002.1 | SUB94698.1 JB | 2007 [NA] | 668 [AA] | 1146090-1148096 | NCTC13067_02573 | Type IV secretory pathway, VirD4 components |
| 2502 | UGTM01000002.1 | SUB94699.1 JB | 1281 [NA] | 426 [AA] | 1148180-1149460 | NCTC13067_02574 | conjugal transfer relaxase TraI |
| 2503 | UGTM01000002.1 | SUB94700.1 JB | 414 [NA] | 137 [AA] | 1149457-1149870 | NCTC13067_02575 | Uncharacterised protein |
| 2504 | UGTM01000002.1 | SUB94701.1 JB | 231 [NA] | 76 [AA] | 1149863-1150093 | NCTC13067_02576 | Uncharacterised protein |
| 2505 | UGTM01000002.1 | SUB94702.1 JB | 792 [NA] | 263 [AA] | 1150437-1151228 | NCTC13067_02577 | CobQ/CobB/MinD/ParA nucleotide binding domain |
| 2506 | UGTM01000002.1 | SUB94703.1 JB | 522 [NA] | 173 [AA] | 1151225-1151746 | NCTC13067_02578 | Protein of uncharacterised function (DUF3408) |
| 2507 | UGTM01000002.1 | SUB94704.1 JB | 438 [NA] | 145 [AA] | 1151743-1152180 | NCTC13067_02579 | Protein of uncharacterised function (DUF3408) |
| 2508 | UGTM01000002.1 | SUB94705.1 JB | 780 [NA] | 259 [AA] | 1152184-1152963 | NCTC13067_02580 | Uncharacterised protein |
| 2509 | UGTM01000002.1 | SUB94706.1 JB | 303 [NA] | 100 [AA] | 1153118-1153420 | NCTC13067_02581 | Type IV secretory pathway, VirB4 components |
| 2510 | UGTM01000002.1 | SUB94707.1 JB | 336 [NA] | 111 [AA] | 1153426-1153761 | NCTC13067_02582 | Uncharacterised protein |
| 2511 | UGTM01000002.1 | SUB94708.1 JB | 2514 [NA] | 837 [AA] | 1153758-1156271 | NCTC13067_02583 | conjugal transfer ATP-binding protein TraC |
| 2512 | UGTM01000002.1 | SUB94709.1 JB | 630 [NA] | 209 [AA] | 1156299-1156928 | NCTC13067_02584 | P-type conjugative transfer protein TrbJ |
| 2513 | UGTM01000002.1 | SUB94710.1 JB | 1038 [NA] | 345 [AA] | 1156981-1158018 | NCTC13067_02585 | Bacteroides conjugative transposon TraJ protein |
| 2514 | UGTM01000002.1 | SUB94711.1 JB | 624 [NA] | 207 [AA] | 1158070-1158693 | NCTC13067_02586 | Type IV secretory pathway, TrbF components |
| 2515 | UGTM01000002.1 | SUB94712.1 JB | 303 [NA] | 100 [AA] | 1158698-1159000 | NCTC13067_02587 | Uncharacterised protein |
| 2516 | UGTM01000002.1 | SUB94713.1 JB | 1248 [NA] | 415 [AA] | 1159017-1160264 | NCTC13067_02588 | Bacteroides conjugative transposon TraM protein |
| 2517 | UGTM01000002.1 | SUB94714.1 JB | 951 [NA] | 316 [AA] | 1160312-1161262 | NCTC13067_02589 | Bacteroides conjugative transposon TraN protein |
| 2518 | UGTM01000002.1 | SUB94715.1 JB | 585 [NA] | 194 [AA] | 1161262-1161846 | NCTC13067_02590 | Conjugative transposon protein TraO |
| 2519 | UGTM01000002.1 | SUB94716.1 JB | 459 [NA] | 152 [AA] | 1161859-1162317 | NCTC13067_02591 | DUF based on B. Theta Gene description |
| 2520 | UGTM01000002.1 | SUB94717.1 JB | 507 [NA] | 168 [AA] | 1162329-1162835 | NCTC13067_02592 | Phage-related lysozyme (muraminidase) |
| 2521 | UGTM01000002.1 | SUB94718.1 JB | 351 [NA] | 116 [AA] | 1162949-1163299 | NCTC13067_02593 | Uncharacterised protein |
| 2522 | UGTM01000002.1 | SUB94719.1 JB | 255 [NA] | 84 [AA] | 1164108-1164362 | NCTC13067_02595 | Uncharacterised protein |
| 2523 | UGTM01000002.1 | SUB94720.1 JB | 1275 [NA] | 424 [AA] | 1164390-1165664 | NCTC13067_02596 | Uncharacterised protein |
| 2524 | UGTM01000002.1 | SUB94721.1 JB | 420 [NA] | 139 [AA] | 1165669-1166088 | NCTC13067_02597 | Uncharacterised protein |
| 2525 | UGTM01000002.1 | SUB94722.1 JB | 432 [NA] | 143 [AA] | 1166111-1166542 | NCTC13067_02598 | Uncharacterised protein |
| 2526 | UGTM01000002.1 | SUB94723.1 JB | 348 [NA] | 115 [AA] | 1166895-1167242 | NCTC13067_02599 | Uncharacterised protein |
| 2527 | UGTM01000002.1 | SUB94724.1 JB | 468 [NA] | 155 [AA] | 1167382-1167849 | NCTC13067_02600 | Domain of uncharacterised function (DUF1896) |
| 2528 | UGTM01000002.1 | SUB94725.1 JB | 1233 [NA] | 410 [AA] | 1167875-1169107 | NCTC13067_02601 | Tyrosine recombinase XerD |
| 2529 | UGTM01000002.1 | SUB94726.1 JB | 417 [NA] | 138 [AA] | 1169478-1169894 | NCTC13067_02602 | Virulence protein |
| 2530 | UGTM01000002.1 | SUB94727.1 JB | 378 [NA] | 125 [AA] | 1170069-1170446 | NCTC13067_02603 | Uncharacterised protein |
| 2531 | UGTM01000002.1 | SUB94728.1 JB | 2310 [NA] | 769 [AA] | 1170485-1172794 | NCTC13067_02604 | TonB-linked outer membrane protein, SusC/RagA family |
| 2532 | UGTM01000002.1 | SUB94729.1 JB | 543 [NA] | 180 [AA] | 1173008-1173550 | NCTC13067_02605 | Bacterial regulatory proteins, luxR family |
| 2533 | UGTM01000002.1 | SUB94730.1 JB | 1080 [NA] | 359 [AA] | 1173747-1174826 | NCTC13067_02606 | Transposase IS116/IS110/IS902 family |
| 2534 | UGTM01000002.1 | SUB94731.1 JB | 1056 [NA] | 351 [AA] | 1175075-1176130 | NCTC13067_02607 | Uncharacterised protein |
| 2535 | UGTM01000002.1 | SUB94732.1 JB | 291 [NA] | 96 [AA] | 1176487-1176777 | NCTC13067_02608 | Helix-turn-helix domain |
| 2536 | UGTM01000002.1 | SUB94733.1 JB | 288 [NA] | 95 [AA] | 1176790-1177077 | NCTC13067_02609 | Helix-turn-helix domain |
| 2537 | UGTM01000002.1 | SUB94734.1 JB | 177 [NA] | 58 [AA] | 1177082-1177258 | NCTC13067_02610 | Uncharacterised protein |
| 2538 | UGTM01000002.1 | SUB94735.1 JB | 1287 [NA] | 428 [AA] | 1177508-1178794 | NCTC13067_02611 | Predicted P-loop ATPase and inactivated derivatives |
| 2539 | UGTM01000002.1 | SUB94736.1 JB | 981 [NA] | 326 [AA] | 1179006-1179986 | NCTC13067_02612 | DNA primase (bacterial type) |
| 2540 | UGTM01000002.1 | SUB94737.1 JB | 459 [NA] | 152 [AA] | 1179991-1180449 | NCTC13067_02613 | Protein of uncharacterised function (DUF3408) |
| 2541 | UGTM01000002.1 | SUB94738.1 JB | 432 [NA] | 143 [AA] | 1180811-1181242 | NCTC13067_02614 | Uncharacterised protein |
| 2542 | UGTM01000002.1 | SUB94739.1 JB | 1062 [NA] | 353 [AA] | 1181226-1182287 | NCTC13067_02615 | conjugal transfer relaxase TraI |
| 2543 | UGTM01000002.1 | SUB94740.1 JB | 1521 [NA] | 506 [AA] | 1182965-1184485 | NCTC13067_02616 | Replicative DNA helicase |
| 2544 | UGTM01000002.1 | SUB94741.1 JB | 840 [NA] | 279 [AA] | 1184584-1185423 | NCTC13067_02617 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
| 2545 | UGTM01000002.1 | SUB94742.1 JB | 3285 [NA] | 1094 [AA] | 1185444-1188728 | NCTC13067_02618 | ATP-dependent helicase/nuclease subunit A |
| 2546 | UGTM01000002.1 | SUB94743.1 JB | 2820 [NA] | 939 [AA] | 1188998-1191817 | NCTC13067_02619 | Inactivated superfamily I helicase |
| 2547 | UGTM01000002.1 | SUB94744.1 JB | 2529 [NA] | 842 [AA] | 1191849-1194377 | NCTC13067_02620 | ATP-dependent DNA helicase pcrA |
| 2548 | UGTM01000002.1 | SUB94745.1 JB | 690 [NA] | 229 [AA] | 1194446-1195135 | NCTC13067_02621 | Penicillin-binding protein 1A |
| 2549 | UGTM01000002.1 | SUB94746.1 JB | 1056 [NA] | 351 [AA] | 1195773-1196828 | NCTC13067_02622 | Transposase DDE domain |
| 2550 | UGTM01000002.1 | SUB94747.1 JB | 2427 [NA] | 808 [AA] | 1197055-1199481 | NCTC13067_02623 | Outer membrane protein/protective antigen OMA87 |
| 2551 | UGTM01000002.1 | SUB94748.1 JB | 5145 [NA] | 1714 [AA] | 1199465-1204609 | NCTC13067_02624 | Uncharacterized protein involved in outer membrane biogenesis |
| 2552 | UGTM01000002.1 | SUB94749.1 JB | 687 [NA] | 228 [AA] | 1204890-1205576 | NCTC13067_02625 | RNA polymerase sigma factor rpoD |
| 2553 | UGTM01000002.1 | SUB94750.1 JB | 633 [NA] | 210 [AA] | 1205625-1206257 | NCTC13067_02626 | SNARE associated Golgi protein |
| 2554 | UGTM01000002.1 | SUB94751.1 JB | 1206 [NA] | 401 [AA] | 1206293-1207498 | NCTC13067_02627 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
| 2555 | UGTM01000002.1 | SUB94752.1 JB | 1719 [NA] | 572 [AA] | 1207511-1209229 | NCTC13067_02628 | Glutamine--tRNA ligase |
| 2556 | UGTM01000002.1 | SUB94753.1 JB | 885 [NA] | 294 [AA] | 1210172-1211056 | NCTC13067_02629 | Uncharacterised protein |
| 2557 | UGTM01000002.1 | SUB94754.1 JB | 519 [NA] | 172 [AA] | 1211316-1211834 | NCTC13067_02630 | Alpha-ribazole phosphatase |
| 2558 | UGTM01000002.1 | SUB94755.1 JB | 690 [NA] | 229 [AA] | 1211878-1212567 | NCTC13067_02631 | Uncharacterized conserved protein |
| 2559 | UGTM01000002.1 | SUB94756.1 JB | 525 [NA] | 174 [AA] | 1212570-1213094 | NCTC13067_02632 | Methylated-DNA--protein-cysteine methyltransferase, constitutive |
| 2560 | UGTM01000002.1 | SUB94757.1 JB | 738 [NA] | 245 [AA] | 1213251-1213988 | NCTC13067_02633 | FMN reductase [NAD(P)H] |
| 2561 | UGTM01000002.1 | SUB94758.1 JB | 2598 [NA] | 865 [AA] | 1214085-1216682 | NCTC13067_02634 | Ribonucleoside-diphosphate reductase subunit alpha |
| 2562 | UGTM01000002.1 | SUB94759.1 JB | 609 [NA] | 202 [AA] | 1216892-1217500 | NCTC13067_02635 | Dihydroneopterin aldolase |
| 2563 | UGTM01000002.1 | SUB94760.1 JB | 1254 [NA] | 417 [AA] | 1217611-1218864 | NCTC13067_02636 | N-acetylmuramoyl-L-alanine amidase AmiA precursor |
| 2564 | UGTM01000002.1 | SUB94761.1 JB | 981 [NA] | 326 [AA] | 1218875-1219855 | NCTC13067_02637 | virulence factor Mce family protein |
| 2565 | UGTM01000003.1 | SUB94797.1 JB | 387 [NA] | 128 [AA] | 247-633 | NCTC13067_02638 | Uncharacterised protein |
| 2566 | UGTM01000003.1 | SUB94798.1 JB | 1188 [NA] | 395 [AA] | 716-1903 | NCTC13067_02639 | replication protein |
| 2567 | UGTM01000003.1 | SUB94799.1 JB | 744 [NA] | 247 [AA] | 2030-2773 | NCTC13067_02640 | Uncharacterised protein |
| 2568 | UGTM01000003.1 | SUB94800.1 JB | 144 [NA] | 47 [AA] | 2799-2942 | NCTC13067_02641 | Uncharacterised protein |