Genome Explorer: Bordetella pertussis J078 (SEQF7944.1)
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NCBI Annotation for SEQF7944.1
| Genome selected: Bordetella pertussis J078 | |||
| Contigs: | 1 | Bases: | 4100915 bps |
| CDS: | 283 | rRNA: | 9 |
| tmRNA: | 1 | tRNA: | 51 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 3501 | CP021401.1 | ASR60563.1 JB | 774 [NA] | 257 [AA] | 1735044-1735817 | CBO47_08440 | NAD(P)-dependent oxidoreductase |
| 3502 | CP021401.1 | ASR60564.1 JB | 963 [NA] | 320 [AA] | 1741845-1742807 | CBO47_08475 | tripartite tricarboxylate transporter substrate binding protein |
| 3503 | CP021401.1 | ASR60565.1 JB | 723 [NA] | 240 [AA] | 1745878-1746600 | CBO47_08500 | arsenical resistance protein ArsH |
| 3504 | CP021401.1 | ASR60566.1 JB | 1098 [NA] | 365 [AA] | 1832169-1833266 | CBO47_08865 | type 1 fimbrial protein |
| 3505 | CP021401.1 | ASR60567.1 JB | 510 [NA] | 169 [AA] | 1857376-1857885 | CBO47_08975 | cyclophilin |
| 3506 | CP021401.1 | ASR60568.1 JB | 1017 [NA] | 338 [AA] | 1865966-1866982 | CBO47_09020 | IS110 family transposase IS1663 |
| 3507 | CP021401.1 | ASR60569.1 JB | 639 [NA] | 212 [AA] | 1874413-1875051 | CBO47_09070 | TetR/AcrR family transcriptional regulator |
| 3508 | CP021401.1 | ASR60570.1 JB | 1026 [NA] | 341 [AA] | 1886026-1887051 | CBO47_09125 | LacI family transcriptional regulator |
| 3509 | CP021401.1 | ASR60571.1 JB | 519 [NA] | 172 [AA] | 1923309-1923827 | CBO47_09290 | MarR family transcriptional regulator |
| 3510 | CP021401.1 | ASR60572.1 JB | 801 [NA] | 266 [AA] | 1928920-1929720 | CBO47_09310 | signal protein |
| 3511 | CP021401.1 | ASR60573.1 JB | 705 [NA] | 234 [AA] | 1944764-1945468 | CBO47_09395 | RNA polymerase subunit sigma |
| 3512 | CP021401.1 | ASR60574.1 JB | 570 [NA] | 189 [AA] | 1945615-1946184 | CBO47_09400 | ferritin |
| 3513 | CP021401.1 | ASR60575.1 JB | 339 [NA] | 112 [AA] | 1991745-1992083 | CBO47_09620 | DNA-binding protein |
| 3514 | CP021401.1 | ASR60576.1 JB | 1137 [NA] | 378 [AA] | 2008458-2009594 | CBO47_09700 | malonyl-CoA decarboxylase |
| 3515 | CP021401.1 | ASR60577.1 JB | 807 [NA] | 268 [AA] | 2016736-2017542 | CBO47_09745 | molybdenum-dependent transcriptional regulator |
| 3516 | CP021401.1 | ASR60578.1 JB | 795 [NA] | 264 [AA] | 2062037-2062831 | CBO47_09965 | NAD(P)-dependent oxidoreductase |
| 3517 | CP021401.1 | ASR60579.1 JB | 1017 [NA] | 338 [AA] | 2072378-2073394 | CBO47_10020 | IS110 family transposase |
| 3518 | CP021401.1 | ASR60580.1 JB | 1014 [NA] | 337 [AA] | 2075374-2076387 | CBO47_10035 | flavin-nucleotide-binding protein |
| 3519 | CP021401.1 | ASR60581.1 JB | 480 [NA] | 159 [AA] | 2087626-2088105 | CBO47_10100 | N-acetyltransferase |
| 3520 | CP021401.1 | ASR60582.1 JB | 876 [NA] | 291 [AA] | 2100297-2101172 | CBO47_10180 | PhzF family phenazine biosynthesis protein |
| 3521 | CP021401.1 | ASR60583.1 JB | 1521 [NA] | 506 [AA] | 2105159-2106679 | CBO47_10205 | aldehyde dehydrogenase |
| 3522 | CP021401.1 | ASR60584.1 JB | 144 [NA] | 47 [AA] | 2118857-2119000 | CBO47_10265 | cbb3-type cytochrome oxidase assembly protein CcoS |
| 3523 | CP021401.1 | ASR60585.1 JB | 2169 [NA] | 722 [AA] | 2132290-2134458 | CBO47_10360 | RNA polymerase sigma factor RpoD |
| 3524 | CP021401.1 | ASR60586.1 JB | 375 [NA] | 124 [AA] | 2173993-2174367 | CBO47_10545 | hypothetical protein |
| 3525 | CP021401.1 | ASR60587.1 JB | 549 [NA] | 182 [AA] | 2279342-2279890 | CBO47_11045 | arylesterase |
| 3526 | CP021401.1 | ASR60588.1 JB | 690 [NA] | 229 [AA] | 2291855-2292544 | CBO47_11110 | protein-L-isoaspartate O-methyltransferase |
| 3527 | CP021401.1 | ASR60589.1 JB | 1017 [NA] | 338 [AA] | 2294418-2295434 | CBO47_11125 | IS110 family transposase IS1663 |
| 3528 | CP021401.1 | ASR60590.1 JB | 2712 [NA] | 903 [AA] | 2310538-2313249 | CBO47_11200 | autotransporter outer membrane beta-barrel domain-containing protein |
| 3529 | CP021401.1 | ASR60591.1 JB | 699 [NA] | 232 [AA] | 2324819-2325517 | CBO47_11255 | hypothetical protein |
| 3530 | CP021401.1 | ASR60592.1 JB | 1080 [NA] | 359 [AA] | 2331301-2332380 | CBO47_11295 | type III secretion system protein |
| 3531 | CP021401.1 | ASR60593.1 JB | 2100 [NA] | 699 [AA] | 2344317-2346416 | CBO47_11390 | EscV/YscV/HrcV family type III secretion system export apparatus protein |
| 3532 | CP021401.1 | ASR60594.1 JB | 1698 [NA] | 565 [AA] | 2359706-2361403 | CBO47_11465 | phosphonate ABC transporter permease |
| 3533 | CP021401.1 | ASR60595.1 JB | 1014 [NA] | 337 [AA] | 2385953-2386966 | CBO47_11580 | acetylpolyamine amidohydrolase |
| 3534 | CP021401.1 | ASR60596.1 JB | 1122 [NA] | 373 [AA] | 2420224-2421345 | CBO47_11735 | transferase |
| 3535 | CP021401.1 | ASR60597.1 JB | 780 [NA] | 259 [AA] | 2464990-2465769 | CBO47_11930 | GntR family transcriptional regulator |
| 3536 | CP021401.1 | ASR60598.1 JB | 891 [NA] | 296 [AA] | 2510829-2511719 | CBO47_12145 | EamA family transporter |
| 3537 | CP021401.1 | ASR60599.1 JB | 240 [NA] | 79 [AA] | 2545359-2545598 | CBO47_12310 | acyl carrier protein |
| 3538 | CP021401.1 | ASR60600.1 JB | 594 [NA] | 197 [AA] | 2549887-2550480 | CBO47_12340 | hypothetical protein |
| 3539 | CP021401.1 | ASR60601.1 JB | 2361 [NA] | 786 [AA] | 2578865-2581225 | CBO47_12485 | DNA translocase FtsK |
| 3540 | CP021401.1 | ASR60602.1 JB | 888 [NA] | 295 [AA] | 2603005-2603892 | CBO47_12590 | MoxR family ATPase |
| 3541 | CP021401.1 | ASR60603.1 JB | 243 [NA] | 80 [AA] | 2613630-2613872 | CBO47_12635 | hypothetical protein |
| 3542 | CP021401.1 | ASR60604.1 JB | 420 [NA] | 139 [AA] | 2618870-2619289 | CBO47_12660 | transcriptional repressor |
| 3543 | CP021401.1 | ASR60605.1 JB | 1437 [NA] | 478 [AA] | 2623013-2624449 | CBO47_12690 | MmgE/PrpD family protein |
| 3544 | CP021401.1 | ASR60606.1 JB | 1185 [NA] | 394 [AA] | 2649012-2650196 | CBO47_12815 | heme biosynthesis operon protein HemX |
| 3545 | CP021401.1 | ASR60607.1 JB | 1359 [NA] | 452 [AA] | 2663011-2664369 | CBO47_12880 | sensor histidine kinase |
| 3546 | CP021401.1 | ASR60608.1 JB | 900 [NA] | 299 [AA] | 2677015-2677914 | CBO47_12945 | recombination-associated protein RdgC |
| 3547 | CP021401.1 | ASR60609.1 JB | 384 [NA] | 127 [AA] | 2681520-2681903 | CBO47_12975 | hypothetical protein |
| 3548 | CP021401.1 | ASR60610.1 JB | 1020 [NA] | 339 [AA] | 2768856-2769875 | CBO47_13440 | tripartite tricarboxylate transporter substrate binding protein |
| 3549 | CP021401.1 | ASR60611.1 JB | 507 [NA] | 168 [AA] | 2810664-2811170 | CBO47_13615 | phenylacetate-CoA oxygenase subunit PaaJ |
| 3550 | CP021401.1 | ASR60612.1 JB | 1422 [NA] | 473 [AA] | 2831250-2832671 | CBO47_13720 | argininosuccinate lyase |
| 3551 | CP021401.1 | ASR60613.1 JB | 504 [NA] | 167 [AA] | 2844994-2845497 | CBO47_13785 | peroxiredoxin |
| 3552 | CP021401.1 | ASR60614.1 JB | 1008 [NA] | 335 [AA] | 2847922-2848929 | CBO47_13800 | biotin synthase |
| 3553 | CP021401.1 | ASR60615.1 JB | 1017 [NA] | 338 [AA] | 2850574-2851590 | CBO47_13815 | IS110 family transposase |
| 3554 | CP021401.1 | ASR60616.1 JB | 2169 [NA] | 722 [AA] | 2891504-2893672 | CBO47_13980 | penicillin-binding protein 1C |
| 3555 | CP021401.1 | ASR60617.1 JB | 831 [NA] | 276 [AA] | 2939389-2940219 | CBO47_14210 | IclR family transcriptional regulator |
| 3556 | CP021401.1 | ASR60618.1 JB | 912 [NA] | 303 [AA] | 2967661-2968572 | CBO47_14350 | tripartite tricarboxylate transporter substrate binding protein |
| 3557 | CP021401.1 | ASR60619.1 JB | 867 [NA] | 288 [AA] | 2970706-2971572 | CBO47_14370 | sugar ABC transporter permease |
| 3558 | CP021401.1 | ASR60620.1 JB | 741 [NA] | 246 [AA] | 2983599-2984339 | CBO47_14435 | oxidoreductase |
| 3559 | CP021401.1 | ASR60621.1 JB | 750 [NA] | 249 [AA] | 2996609-2997358 | CBO47_14510 | enoyl-ACP reductase |
| 3560 | CP021401.1 | ASR60622.1 JB | 1347 [NA] | 448 [AA] | 2997386-2998732 | CBO47_14515 | MFS transporter |
| 3561 | CP021401.1 | ASR60623.1 JB | 2490 [NA] | 829 [AA] | 3002739-3005228 | CBO47_14540 | copper-translocating P-type ATPase |
| 3562 | CP021401.1 | ASR60624.1 JB | 690 [NA] | 229 [AA] | 3028067-3028756 | CBO47_14670 | ABC transporter ATP-binding protein |
| 3563 | CP021401.1 | ASR60625.1 JB | 858 [NA] | 285 [AA] | 3037690-3038547 | CBO47_14725 | ABC transporter permease |
| 3564 | CP021401.1 | ASR60626.1 JB | 1437 [NA] | 478 [AA] | 3057988-3059424 | CBO47_14845 | NAD synthetase |
| 3565 | CP021401.1 | ASR60627.1 JB | 123 [NA] | 40 [AA] | 3057869-3057991 | CBO47_14840 | hypothetical protein |
| 3566 | CP021401.1 | ASR60628.1 JB | 1326 [NA] | 441 [AA] | 3091626-3092951 | CBO47_14950 | chromate transporter |
| 3567 | CP021401.1 | ASR60629.1 JB | 2199 [NA] | 732 [AA] | 3094435-3096633 | CBO47_14960 | TonB-dependent siderophore receptor |
| 3568 | CP021401.1 | ASR60630.1 JB | 1980 [NA] | 659 [AA] | 3103007-3104986 | CBO47_15010 | cytochrome ubiquinol oxidase subunit I |
| 3569 | CP021401.1 | ASR60631.1 JB | 1125 [NA] | 374 [AA] | 3119299-3120423 | CBO47_15090 | riboflavin biosynthesis protein RibD |
| 3570 | CP021401.1 | ASR60632.1 JB | 429 [NA] | 142 [AA] | 3133050-3133478 | CBO47_15160 | 50S ribosomal protein L13 |
| 3571 | CP021401.1 | ASR60633.1 JB | 1446 [NA] | 481 [AA] | 3149568-3151013 | CBO47_15240 | glutamate--tRNA ligase |
| 3572 | CP021401.1 | ASR60634.1 JB | 3063 [NA] | 1020 [AA] | 3153998-3157060 | CBO47_15265 | pyruvate ferredoxin oxidoreductase |
| 3573 | CP021401.1 | ASR60635.1 JB | 258 [NA] | 85 [AA] | 3153609-3153866 | CBO47_15260 | hypothetical protein |
| 3574 | CP021401.1 | ASR60636.1 JB | 1128 [NA] | 375 [AA] | 3165809-3166936 | CBO47_15305 | teichoic acid biosynthesis protein |
| 3575 | CP021401.1 | ASR60637.1 JB | 942 [NA] | 313 [AA] | 3168158-3169099 | CBO47_15320 | carbohydrate kinase family protein |
| 3576 | CP021401.1 | ASR60638.1 JB | 1701 [NA] | 566 [AA] | 3206789-3208489 | CBO47_15495 | cell division protein |
| 3577 | CP021401.1 | ASR60639.1 JB | 477 [NA] | 158 [AA] | 3223119-3223595 | CBO47_15570 | Lrp/AsnC family transcriptional regulator |
| 3578 | CP021401.1 | ASR60640.1 JB | 483 [NA] | 160 [AA] | 3238675-3239157 | CBO47_15655 | hypothetical protein |
| 3579 | CP021401.1 | ASR60641.1 JB | 306 [NA] | 101 [AA] | 3241105-3241410 | CBO47_15670 | RND transporter |
| 3580 | CP021401.1 | ASR60642.1 JB | 624 [NA] | 207 [AA] | 3248851-3249474 | CBO47_15720 | hypothetical protein |
| 3581 | CP021401.1 | ASR60643.1 JB | 1374 [NA] | 457 [AA] | 3266090-3267463 | CBO47_15805 | MFS transporter |
| 3582 | CP021401.1 | ASR60644.1 JB | 1479 [NA] | 492 [AA] | 3277062-3278540 | CBO47_15850 | phospholipase D family protein |
| 3583 | CP021401.1 | ASR60645.1 JB | 885 [NA] | 294 [AA] | 3281261-3282145 | CBO47_15870 | alpha/beta hydrolase |
| 3584 | CP021401.1 | ASR60646.1 JB | 426 [NA] | 141 [AA] | 3283526-3283951 | CBO47_15890 | hypothetical protein |
| 3585 | CP021401.1 | ASR60647.1 JB | 486 [NA] | 161 [AA] | 3300544-3301029 | CBO47_15980 | hypothetical protein |
| 3586 | CP021401.1 | ASR60648.1 JB | 933 [NA] | 310 [AA] | 3327492-3328424 | CBO47_16085 | ribose-phosphate pyrophosphokinase |
| 3587 | CP021401.1 | ASR60649.1 JB | 1284 [NA] | 427 [AA] | 3365900-3367183 | CBO47_16250 | aspartate aminotransferase family protein |
| 3588 | CP021401.1 | ASR60650.1 JB | 1017 [NA] | 338 [AA] | 3424948-3425964 | CBO47_16540 | IS110 family transposase |
| 3589 | CP021401.1 | ASR60651.1 JB | 1017 [NA] | 338 [AA] | 3439481-3440497 | CBO47_16610 | IS110 family transposase IS1663 |
| 3590 | CP021401.1 | ASR60652.1 JB | 1017 [NA] | 338 [AA] | 3458242-3459258 | CBO47_16680 | IS110 family transposase |
| 3591 | CP021401.1 | ASR60653.1 JB | 990 [NA] | 329 [AA] | 3460061-3461050 | CBO47_16690 | tripartite tricarboxylate transporter substrate binding protein |
| 3592 | CP021401.1 | ASR60654.1 JB | 321 [NA] | 106 [AA] | 3495612-3495932 | CBO47_16865 | ABC transporter permease |
| 3593 | CP021401.1 | ASR60655.1 JB | 885 [NA] | 294 [AA] | 3503043-3503927 | CBO47_16910 | hypothetical protein |
| 3594 | CP021401.1 | ASR60656.1 JB | 828 [NA] | 275 [AA] | 3533717-3534544 | CBO47_17045 | copper resistance protein |
| 3595 | CP021401.1 | ASR60657.1 JB | 1287 [NA] | 428 [AA] | 3549762-3551048 | CBO47_17125 | hypothetical protein |
| 3596 | CP021401.1 | ASR60658.1 JB | 1266 [NA] | 421 [AA] | 3551175-3552440 | CBO47_17130 | hypothetical protein |
| 3597 | CP021401.1 | ASR60659.1 JB | 231 [NA] | 76 [AA] | 3567876-3568106 | CBO47_17215 | hypothetical protein |
| 3598 | CP021401.1 | ASR60660.1 JB | 981 [NA] | 326 [AA] | 3597079-3598059 | CBO47_17340 | NAD(P)-dependent oxidoreductase |
| 3599 | CP021401.1 | ASR60661.1 JB | 945 [NA] | 314 [AA] | 3603559-3604503 | CBO47_17365 | LysR family transcriptional regulator |
| 3600 | CP021401.1 | ASR60662.1 JB | 963 [NA] | 320 [AA] | 3615069-3616031 | CBO47_17415 | LysR family transcriptional regulator |
| 3601 | CP021401.1 | ASR60663.1 JB | 408 [NA] | 135 [AA] | 3618393-3618800 | CBO47_17435 | hypothetical protein |
| 3602 | CP021401.1 | ASR60664.1 JB | 351 [NA] | 116 [AA] | 3660706-3661056 | CBO47_17635 | rhodanese |
| 3603 | CP021401.1 | ASR60665.1 JB | 615 [NA] | 204 [AA] | 3664618-3665232 | CBO47_17665 | hypothetical protein |
| 3604 | CP021401.1 | ASR60666.1 JB | 777 [NA] | 258 [AA] | 3698002-3698778 | CBO47_17820 | L-aspartate dehydrogenase |
| 3605 | CP021401.1 | ASR60667.1 JB | 6723 [NA] | 2240 [AA] | 3735161-3741883 | CBO47_18035 | autotransporter outer membrane beta-barrel domain-containing protein |
| 3606 | CP021401.1 | ASR60668.1 JB | 972 [NA] | 323 [AA] | 3775694-3776665 | CBO47_18245 | tripartite tricarboxylate transporter substrate binding protein |
| 3607 | CP021401.1 | ASR60669.1 JB | 1608 [NA] | 535 [AA] | 3788875-3790482 | CBO47_18310 | methylcrotonoyl-CoA carboxylase |
| 3608 | CP021401.1 | ASR60670.1 JB | 1473 [NA] | 490 [AA] | 3812745-3814217 | CBO47_18395 | aldehyde dehydrogenase family protein |
| 3609 | CP021401.1 | ASR60671.1 JB | 1017 [NA] | 338 [AA] | 3832854-3833870 | CBO47_18485 | IS110 family transposase |
| 3610 | CP021401.1 | ASR60672.1 JB | 186 [NA] | 61 [AA] | 3872797-3872982 | CBO47_18740 | hypothetical protein |
| 3611 | CP021401.1 | ASR60673.1 JB | 501 [NA] | 166 [AA] | 3884140-3884640 | CBO47_18785 | single-stranded DNA-binding protein |
| 3612 | CP021401.1 | ASR60674.1 JB | 504 [NA] | 167 [AA] | 3887033-3887536 | CBO47_18795 | hypothetical protein |
| 3613 | CP021401.1 | ASR60675.1 JB | 834 [NA] | 277 [AA] | 3890241-3891074 | CBO47_18820 | LysR family transcriptional regulator |
| 3614 | CP021401.1 | ASR60676.1 JB | 735 [NA] | 244 [AA] | 3933201-3933935 | CBO47_19045 | NADH pyrophosphatase |
| 3615 | CP021401.1 | ASR60677.1 JB | 870 [NA] | 289 [AA] | 3943051-3943920 | CBO47_19090 | branched-chain amino acid ABC transporter permease |
| 3616 | CP021401.1 | ASR60678.1 JB | 1362 [NA] | 453 [AA] | 3944617-3945978 | CBO47_19100 | (Fe-S)-binding protein |
| 3617 | CP021401.1 | ASR60679.1 JB | 222 [NA] | 73 [AA] | 3956839-3957060 | CBO47_19155 | hypothetical protein |
| 3618 | CP021401.1 | ASR60680.1 JB | 723 [NA] | 240 [AA] | 3960438-3961160 | CBO47_19180 | SURF1 family protein |
| 3619 | CP021401.1 | ASR60681.1 JB | 1125 [NA] | 374 [AA] | 4011284-4012408 | CBO47_19455 | type IV secretion system protein PtlG |
| 3620 | CP021401.1 | ASR60682.1 JB | 792 [NA] | 263 [AA] | 4014761-4015552 | CBO47_19475 | AraC family transcriptional regulator |
| 3621 | CP021401.1 | ASR60683.1 JB | 1023 [NA] | 340 [AA] | 4064784-4065806 | CBO47_19690 | CoA transferase |
| 3622 | CP021401.1 | ASR60684.1 JB | 1239 [NA] | 412 [AA] | 4073783-4075021 | CBO47_19735 | CoA transferase |