Genome Explorer: Roseomonas gilardii DE0006 (SEQF9512.1)
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PROKKA Annotation for SEQF9512.1
| Genome selected: Roseomonas gilardii DE0006 | |||
| Contigs: | 73 | Bases: | 5166269 bps |
| CDS: | 4620 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 59 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 4501 | SEQF9512.1_VEIX01000025.1 | SEQF9512.1_01789 JB | 486 [NA] | 161 [AA] | 12655-13140 | hypothetical protein | |
| 4502 | SEQF9512.1_VEIX01000025.1 | SEQF9512.1_01790 JB | 1851 [NA] | 616 [AA] | 13142-14992 | btuD_5 | Vitamin B12 import ATP-binding protein BtuD |
| 4503 | SEQF9512.1_VEIX01000025.1 | SEQF9512.1_01791 JB | 1050 [NA] | 349 [AA] | 15351-16400 | mshA_4 | D-inositol-3-phosphate glycosyltransferase |
| 4504 | SEQF9512.1_VEIX01000025.1 | SEQF9512.1_01792 JB | 1281 [NA] | 426 [AA] | 16589-17869 | Outer membrane protein | |
| 4505 | SEQF9512.1_VEIX01000025.1 | SEQF9512.1_01793 JB | 537 [NA] | 178 [AA] | 18013-18549 | nusG | Transcription terminationantitermination protein NusG |
| 4506 | SEQF9512.1_VEIX01000025.1 | SEQF9512.1_01794 JB | 195 [NA] | 64 [AA] | 18571-18765 | secE | Protein translocase subunit SecE |
| 4507 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01796 JB | 375 [NA] | 124 [AA] | 59-433 | Insertion sequence IS5376 putative ATP-binding protein | |
| 4508 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01797 JB | 237 [NA] | 78 [AA] | 430-666 | hypothetical protein | |
| 4509 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01798 JB | 432 [NA] | 143 [AA] | 757-1188 | hypothetical protein | |
| 4510 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01799 JB | 282 [NA] | 93 [AA] | 1205-1486 | IS5 family transposase IS711 | |
| 4511 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01800 JB | 1107 [NA] | 368 [AA] | 1928-3034 | IS110 family transposase ISSfr2 | |
| 4512 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01801 JB | 342 [NA] | 113 [AA] | 3118-3459 | IS5 family transposase IS711 | |
| 4513 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01802 JB | 1032 [NA] | 343 [AA] | 4227-5258 | IS110 family transposase ISMmg1 | |
| 4514 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01803 JB | 486 [NA] | 161 [AA] | 5446-5931 | IS630 family transposase ISRel6 | |
| 4515 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01804 JB | 705 [NA] | 234 [AA] | 5876-6580 | hypothetical protein | |
| 4516 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01805 JB | 402 [NA] | 133 [AA] | 7115-7516 | insK | Putative transposase InsK for insertion sequence element IS150 |
| 4517 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01806 JB | 135 [NA] | 44 [AA] | 7648-7782 | hypothetical protein | |
| 4518 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01807 JB | 219 [NA] | 72 [AA] | 8237-8455 | hypothetical protein | |
| 4519 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01808 JB | 360 [NA] | 119 [AA] | 8456-8815 | hypothetical protein | |
| 4520 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01809 JB | 261 [NA] | 86 [AA] | 9128-9388 | hypothetical protein | |
| 4521 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01810 JB | 423 [NA] | 140 [AA] | 9385-9807 | fitB_2 | Toxin FitB |
| 4522 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01811 JB | 1032 [NA] | 343 [AA] | 9804-10835 | xerC_3 | Tyrosine recombinase XerC |
| 4523 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01812 JB | 636 [NA] | 211 [AA] | 10851-11486 | hypothetical protein | |
| 4524 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01813 JB | 873 [NA] | 290 [AA] | 11464-12336 | scpA_1 | Segregation and condensation protein A |
| 4525 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01814 JB | 357 [NA] | 118 [AA] | 12362-12718 | hypothetical protein | |
| 4526 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01815 JB | 315 [NA] | 104 [AA] | 12810-13124 | ihfA_2 | Integration host factor subunit alpha |
| 4527 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01816 JB | 1530 [NA] | 509 [AA] | 13618-15147 | hypothetical protein | |
| 4528 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01817 JB | 441 [NA] | 146 [AA] | 15144-15584 | hypothetical protein | |
| 4529 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01818 JB | 1548 [NA] | 515 [AA] | 15732-17279 | hypothetical protein | |
| 4530 | SEQF9512.1_VEIX01000026.1 | SEQF9512.1_01819 JB | 591 [NA] | 196 [AA] | 17276-17866 | IS21 family transposase ISRel5 | |
| 4531 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01820 JB | 486 [NA] | 161 [AA] | 348-833 | hypothetical protein | |
| 4532 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01821 JB | 1035 [NA] | 344 [AA] | 830-1864 | hypothetical protein | |
| 4533 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01822 JB | 411 [NA] | 136 [AA] | 2277-2687 | ttuD_1 | Putative hydroxypyruvate reductase |
| 4534 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01823 JB | 810 [NA] | 269 [AA] | 2750-3559 | ttuD_2 | Putative hydroxypyruvate reductase |
| 4535 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01824 JB | 996 [NA] | 331 [AA] | 3662-4657 | hypothetical protein | |
| 4536 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01825 JB | 1137 [NA] | 378 [AA] | 4692-5828 | gci | D-galactarolactone cycloisomerase |
| 4537 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01826 JB | 882 [NA] | 293 [AA] | 6047-6928 | rbsR_3 | Ribose operon repressor |
| 4538 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01827 JB | 1008 [NA] | 335 [AA] | 6932-7939 | hypothetical protein | |
| 4539 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01828 JB | 1002 [NA] | 333 [AA] | 7936-8937 | Hydroxypyruvate reductase | |
| 4540 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01829 JB | 837 [NA] | 278 [AA] | 9326-10162 | nimT_2 | 2-nitroimidazole transporter |
| 4541 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01830 JB | 354 [NA] | 117 [AA] | 10229-10582 | yycB | putative transporter YycB |
| 4542 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01831 JB | 678 [NA] | 225 [AA] | 10694-11371 | ribB | 3%2C4-dihydroxy-2-butanone 4-phosphate synthase |
| 4543 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01832 JB | 1023 [NA] | 340 [AA] | 11764-12786 | degA_2 | HTH-type transcriptional regulator DegA |
| 4544 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01833 JB | 984 [NA] | 327 [AA] | 12865-13848 | hypothetical protein | |
| 4545 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01834 JB | 1362 [NA] | 453 [AA] | 13887-15248 | thi4 | Thiamine thiazole synthase |
| 4546 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01835 JB | 1707 [NA] | 568 [AA] | 15253-16959 | ilvD_1 | Dihydroxy-acid dehydratase |
| 4547 | SEQF9512.1_VEIX01000027.1 | SEQF9512.1_01836 JB | 150 [NA] | 49 [AA] | 17234-17383 | Insertion sequence IS5376 putative ATP-binding protein | |
| 4548 | SEQF9512.1_VEIX01000028.1 | SEQF9512.1_01837 JB | 1449 [NA] | 482 [AA] | 370-1818 | hpyO_2 | FAD-dependent urate hydroxylase |
| 4549 | SEQF9512.1_VEIX01000028.1 | SEQF9512.1_01838 JB | 699 [NA] | 232 [AA] | 2117-2815 | rspR_6 | HTH-type transcriptional repressor RspR |
| 4550 | SEQF9512.1_VEIX01000028.1 | SEQF9512.1_01839 JB | 1671 [NA] | 556 [AA] | 2906-4576 | yejF_3 | putative ABC transporter ATP-binding protein YejF |
| 4551 | SEQF9512.1_VEIX01000028.1 | SEQF9512.1_01840 JB | 870 [NA] | 289 [AA] | 4573-5442 | ddpC_3 | putative D%2CD-dipeptide transport system permease protein DdpC |
| 4552 | SEQF9512.1_VEIX01000028.1 | SEQF9512.1_01841 JB | 1032 [NA] | 343 [AA] | 5439-6470 | dppB_6 | Dipeptide transport system permease protein DppB |
| 4553 | SEQF9512.1_VEIX01000028.1 | SEQF9512.1_01842 JB | 1614 [NA] | 537 [AA] | 6474-8087 | ddpA_3 | putative D%2CD-dipeptide-binding periplasmic protein DdpA |
| 4554 | SEQF9512.1_VEIX01000028.1 | SEQF9512.1_01843 JB | 762 [NA] | 253 [AA] | 8194-8955 | linX | 2%2C5-dichloro-2%2C5-cyclohexadiene-1%2C4-diol dehydrogenase LinX |
| 4555 | SEQF9512.1_VEIX01000028.1 | SEQF9512.1_01844 JB | 789 [NA] | 262 [AA] | 8952-9740 | hdfR_2 | HTH-type transcriptional regulator HdfR |
| 4556 | SEQF9512.1_VEIX01000028.1 | SEQF9512.1_01845 JB | 891 [NA] | 296 [AA] | 10183-11073 | hypothetical protein | |
| 4557 | SEQF9512.1_VEIX01000028.1 | SEQF9512.1_01846 JB | 243 [NA] | 80 [AA] | 11086-11328 | hypothetical protein | |
| 4558 | SEQF9512.1_VEIX01000028.1 | SEQF9512.1_01847 JB | 621 [NA] | 206 [AA] | 11748-12368 | hypothetical protein | |
| 4559 | SEQF9512.1_VEIX01000028.1 | SEQF9512.1_01848 JB | 2133 [NA] | 710 [AA] | 12487-14619 | hypothetical protein | |
| 4560 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01849 JB | 540 [NA] | 179 [AA] | 254-793 | cetB_2 | 2-epi-5-epi-valiolone epimerase |
| 4561 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01850 JB | 207 [NA] | 68 [AA] | 804-1010 | hypothetical protein | |
| 4562 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01851 JB | 582 [NA] | 193 [AA] | 1476-2057 | hypothetical protein | |
| 4563 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01852 JB | 552 [NA] | 183 [AA] | 2153-2704 | hypothetical protein | |
| 4564 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01853 JB | 1044 [NA] | 347 [AA] | 2798-3841 | hypothetical protein | |
| 4565 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01854 JB | 1137 [NA] | 378 [AA] | 3855-4991 | hypothetical protein | |
| 4566 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01855 JB | 1038 [NA] | 345 [AA] | 4988-6025 | ccpA_2 | Catabolite control protein A |
| 4567 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01856 JB | 582 [NA] | 193 [AA] | 6042-6623 | hypothetical protein | |
| 4568 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01857 JB | 351 [NA] | 116 [AA] | 7240-7590 | hypothetical protein | |
| 4569 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01858 JB | 345 [NA] | 114 [AA] | 7587-7931 | hypothetical protein | |
| 4570 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01859 JB | 702 [NA] | 233 [AA] | 7944-8645 | hypothetical protein | |
| 4571 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01860 JB | 1320 [NA] | 439 [AA] | 8725-10044 | sauU_1 | putative sulfoacetate transporter SauU |
| 4572 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01861 JB | 1257 [NA] | 418 [AA] | 10282-11538 | uctC_1 | Acetyl-CoA:oxalate CoA-transferase |
| 4573 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01862 JB | 492 [NA] | 163 [AA] | 11667-12158 | hypothetical protein | |
| 4574 | SEQF9512.1_VEIX01000029.1 | SEQF9512.1_01863 JB | 1338 [NA] | 445 [AA] | 12308-13645 | ttuD_3 | Putative hydroxypyruvate reductase |
| 4575 | SEQF9512.1_VEIX01000030.1 | SEQF9512.1_02333 JB | 1539 [NA] | 512 [AA] | 286-1824 | hypothetical protein | |
| 4576 | SEQF9512.1_VEIX01000030.1 | SEQF9512.1_02334 JB | 324 [NA] | 107 [AA] | 2744-3067 | IS630 family transposase ISGdi4 | |
| 4577 | SEQF9512.1_VEIX01000030.1 | SEQF9512.1_02335 JB | 597 [NA] | 198 [AA] | 3543-4139 | hypothetical protein | |
| 4578 | SEQF9512.1_VEIX01000030.1 | SEQF9512.1_02336 JB | 243 [NA] | 80 [AA] | 4241-4483 | hypothetical protein | |
| 4579 | SEQF9512.1_VEIX01000030.1 | SEQF9512.1_02337 JB | 1908 [NA] | 635 [AA] | 4763-6670 | hypothetical protein | |
| 4580 | SEQF9512.1_VEIX01000030.1 | SEQF9512.1_02338 JB | 348 [NA] | 115 [AA] | 6836-7183 | hypothetical protein | |
| 4581 | SEQF9512.1_VEIX01000031.1 | SEQF9512.1_02339 JB | 243 [NA] | 80 [AA] | 43-285 | hypothetical protein | |
| 4582 | SEQF9512.1_VEIX01000031.1 | SEQF9512.1_02340 JB | 1071 [NA] | 356 [AA] | 1288-2358 | gutB | Sorbitol dehydrogenase |
| 4583 | SEQF9512.1_VEIX01000031.1 | SEQF9512.1_02341 JB | 966 [NA] | 321 [AA] | 2390-3355 | acoA_1 | Acetoin:2%2C6-dichlorophenolindophenol oxidoreductase subunit alpha |
| 4584 | SEQF9512.1_VEIX01000031.1 | SEQF9512.1_02342 JB | 1023 [NA] | 340 [AA] | 3371-4393 | acoB | Acetoin:2%2C6-dichlorophenolindophenol oxidoreductase subunit beta |
| 4585 | SEQF9512.1_VEIX01000031.1 | SEQF9512.1_02343 JB | 1134 [NA] | 377 [AA] | 4390-5523 | acoC | Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system |
| 4586 | SEQF9512.1_VEIX01000031.1 | SEQF9512.1_02344 JB | 789 [NA] | 262 [AA] | 5537-6325 | budC_1 | Diacetyl reductase [(S)-acetoin forming] |
| 4587 | SEQF9512.1_VEIX01000032.1 | SEQF9512.1_02345 JB | 225 [NA] | 74 [AA] | 1657-1881 | hypothetical protein | |
| 4588 | SEQF9512.1_VEIX01000032.1 | SEQF9512.1_02346 JB | 636 [NA] | 211 [AA] | 1894-2529 | mcbR_2 | HTH-type transcriptional regulator McbR |
| 4589 | SEQF9512.1_VEIX01000032.1 | SEQF9512.1_02347 JB | 1320 [NA] | 439 [AA] | 2675-3994 | sauU_2 | putative sulfoacetate transporter SauU |
| 4590 | SEQF9512.1_VEIX01000032.1 | SEQF9512.1_02348 JB | 1191 [NA] | 396 [AA] | 4298-5488 | uctC_2 | Acetyl-CoA:oxalate CoA-transferase |
| 4591 | SEQF9512.1_VEIX01000032.1 | SEQF9512.1_02349 JB | 789 [NA] | 262 [AA] | 5485-6273 | crt | Short-chain-enoyl-CoA hydratase |
| 4592 | SEQF9512.1_VEIX01000033.1 | SEQF9512.1_02350 JB | 1392 [NA] | 463 [AA] | 235-1626 | hypothetical protein | |
| 4593 | SEQF9512.1_VEIX01000033.1 | SEQF9512.1_02351 JB | 249 [NA] | 82 [AA] | 1650-1898 | hypothetical protein | |
| 4594 | SEQF9512.1_VEIX01000033.1 | SEQF9512.1_02352 JB | 792 [NA] | 263 [AA] | 2102-2893 | fabG_6 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG |
| 4595 | SEQF9512.1_VEIX01000033.1 | SEQF9512.1_02353 JB | 906 [NA] | 301 [AA] | 2987-3892 | dmlR_3 | HTH-type transcriptional regulator DmlR |
| 4596 | SEQF9512.1_VEIX01000033.1 | SEQF9512.1_02354 JB | 1044 [NA] | 347 [AA] | 4170-5213 | hypothetical protein | |
| 4597 | SEQF9512.1_VEIX01000033.1 | SEQF9512.1_02355 JB | 219 [NA] | 72 [AA] | 5164-5382 | IS110 family transposase ISMch4 | |
| 4598 | SEQF9512.1_VEIX01000033.1 | SEQF9512.1_02356 JB | 189 [NA] | 62 [AA] | 6091-6279 | hypothetical protein | |
| 4599 | SEQF9512.1_VEIX01000035.1 | SEQF9512.1_02362 JB | 987 [NA] | 328 [AA] | 510-1496 | hypothetical protein | |
| 4600 | SEQF9512.1_VEIX01000035.1 | SEQF9512.1_02363 JB | 2739 [NA] | 912 [AA] | 1493-4231 | rbbA_2 | Ribosome-associated ATPase |
| 4601 | SEQF9512.1_VEIX01000035.1 | SEQF9512.1_02364 JB | 1107 [NA] | 368 [AA] | 4236-5342 | yhhJ | Inner membrane transport permease YhhJ |
| 4602 | SEQF9512.1_VEIX01000036.1 | SEQF9512.1_02365 JB | 513 [NA] | 170 [AA] | 100-612 | hypothetical protein | |
| 4603 | SEQF9512.1_VEIX01000036.1 | SEQF9512.1_02366 JB | 2862 [NA] | 953 [AA] | 837-3698 | hypothetical protein | |
| 4604 | SEQF9512.1_VEIX01000037.1 | SEQF9512.1_02367 JB | 921 [NA] | 306 [AA] | 68-988 | hypothetical protein | |
| 4605 | SEQF9512.1_VEIX01000037.1 | SEQF9512.1_02368 JB | 1413 [NA] | 470 [AA] | 1332-2744 | hypothetical protein | |
| 4606 | SEQF9512.1_VEIX01000037.1 | SEQF9512.1_02369 JB | 546 [NA] | 181 [AA] | 2704-3249 | IS21 family transposase ISMdi27 | |
| 4607 | SEQF9512.1_VEIX01000038.1 | SEQF9512.1_02370 JB | 600 [NA] | 199 [AA] | 64-663 | ttuD_4 | Putative hydroxypyruvate reductase |
| 4608 | SEQF9512.1_VEIX01000038.1 | SEQF9512.1_02371 JB | 1026 [NA] | 341 [AA] | 727-1752 | alx | Putative membrane-bound redox modulator Alx |
| 4609 | SEQF9512.1_VEIX01000038.1 | SEQF9512.1_02373 JB | 561 [NA] | 186 [AA] | 2070-2630 | hypothetical protein | |
| 4610 | SEQF9512.1_VEIX01000039.1 | SEQF9512.1_02374 JB | 2232 [NA] | 743 [AA] | 464-2695 | hypothetical protein | |
| 4611 | SEQF9512.1_VEIX01000040.1 | SEQF9512.1_02809 JB | 798 [NA] | 265 [AA] | 489-1286 | budC_2 | Diacetyl reductase [(S)-acetoin forming] |
| 4612 | SEQF9512.1_VEIX01000041.1 | SEQF9512.1_02810 JB | 1326 [NA] | 441 [AA] | 26-1351 | IS701 family transposase ISBj6_B | |
| 4613 | SEQF9512.1_VEIX01000042.1 | SEQF9512.1_02811 JB | 330 [NA] | 109 [AA] | 51-380 | IS3 family transposase ISAzs24 | |
| 4614 | SEQF9512.1_VEIX01000042.1 | SEQF9512.1_02813 JB | 903 [NA] | 300 [AA] | 377-1279 | IS3 family transposase ISAli4 | |
| 4615 | SEQF9512.1_VEIX01000043.1 | SEQF9512.1_02814 JB | 513 [NA] | 170 [AA] | 90-602 | IS630 family transposase ISAli3 | |
| 4616 | SEQF9512.1_VEIX01000043.1 | SEQF9512.1_02815 JB | 516 [NA] | 171 [AA] | 644-1159 | IS630 family transposase ISAli3 | |
| 4617 | SEQF9512.1_VEIX01000044.1 | SEQF9512.1_02816 JB | 324 [NA] | 107 [AA] | 477-800 | hypothetical protein | |
| 4618 | SEQF9512.1_VEIX01000044.1 | SEQF9512.1_02817 JB | 114 [NA] | 37 [AA] | 876-989 | hypothetical protein | |
| 4619 | SEQF9512.1_VEIX01000045.1 | SEQF9512.1_02818 JB | 795 [NA] | 264 [AA] | 18-812 | IS5 family transposase IS12528 | |
| 4620 | SEQF9512.1_VEIX01000063.1 | SEQF9512.1_03537 JB | 291 [NA] | 96 [AA] | 2-292 | IS3 family transposase ISNha4 |