HOMD ::Order:Fusobacteriales

Order: Fusobacteriales

Full Lineage: Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales Each rank name is a link to abundance plots at that rank:

Lower rank member(s): [Family:Fusobacteriaceae] [Family:Leptotrichiaceae]
Genera:

LINKS: Ecology Home | Life Page: Fusobacteriales

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Eren V1-V3 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	9.985	6.598	2.076	1.831	2.161	3.087	6.546	8.755	5.361	0.003
10^thp	1.039	0.283	0.012	0.196	0.337	0.708	0.688	1.597	0.430	0.000
90^thp	19.292	14.979	6.619	3.893	4.696	6.114	14.376	18.951	12.607	0.000
Stdev	9.560	6.340	4.331	1.971	1.741	2.045	6.462	7.623	4.569	0.009
Prev(%)	98.701	100.000	90.909	98.701	98.701	98.701	100.000	100.000	100.000	9.091

Eren V3-V5 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	18.243	13.425	2.488	4.023	4.958	8.284	11.393	15.425	11.811	0.002
10^thp	5.243	1.873	0.063	0.634	0.994	2.191	2.387	4.645	1.891	0.000
90^thp	30.312	24.934	6.443	7.898	10.120	14.896	23.445	27.985	24.711	0.000
Stdev	9.403	8.963	3.648	3.546	4.178	4.817	8.271	8.642	8.850	0.006
Prev(%)	100.000	100.000	97.297	100.000	100.000	100.000	100.000	100.000	100.000	6.993

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	12.117	8.175	3.116	3.553	4.390	5.054	10.424	13.722	9.221	0.182	0.295	0.119	0.697	0.688	0.497	0.398	0.398	0.003
10^thp	1.996	0.817	0.068	0.475	0.597	1.136	2.139	2.843	0.865	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	23.783	19.119	8.514	7.568	9.752	11.447	21.740	24.564	19.736	0.383	0.293	0.154	1.487	1.637	0.066	0.092	0.028	0.000
Stdev	8.425	7.227	4.668	3.578	4.078	3.899	8.453	8.627	7.427	0.711	1.520	0.605	2.398	1.754	2.452	2.223	2.770	0.035
Prev(%)	99.338	99.338	97.203	99.315	99.329	97.692	99.405	100.000	100.000	59.000	49.713	41.360	59.770	56.682	23.944	16.216	11.842	1.307

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	17.031	11.501	4.717	6.610	8.130	8.570	15.637	19.479	13.403	0.241	1.032	0.856	2.547	2.446	0.812	0.669	0.801	0.043
10^thp	4.260	1.585	0.240	1.282	2.039	2.634	3.942	7.636	2.398	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	29.109	23.819	12.097	13.652	16.286	17.060	30.132	33.346	25.857	0.603	1.386	1.738	5.852	5.668	0.145	0.000	0.000	0.022
Stdev	9.979	8.946	5.892	5.635	5.990	5.763	10.645	9.835	9.377	0.665	3.546	2.907	5.557	6.161	4.362	4.000	4.755	0.473
Prev(%)	100.000	100.000	97.284	99.752	100.000	100.000	99.377	100.000	99.757	65.900	63.057	58.642	78.621	76.000	33.908	7.104	6.806	17.762

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	19.097	18.606	3.523	4.312	4.392	4.912	8.988	9.537	8.045	0.018
10^thp	1.301	2.610	0.081	0.141	0.585	0.248	1.389	2.906	0.115	0.000
90^thp	39.550	34.382	10.645	10.864	8.798	13.532	17.437	17.257	22.100	0.085
Stdev	14.494	12.683	4.653	4.670	5.760	5.507	8.976	9.476	9.812	0.041
Prev(%)	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	30.000

Human Microbiome Project Metaphlan (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	7.500	3.593	4.402	2.019	1.985	1.990	2.565	10.386	9.156	6.207	0.133	0.028	0.005	0.000	0.044	0.604	0.395	0.015
10^thp	2.178	0.430	0.932	0.024	0.100	1.990	1.569	2.515	2.830	0.960	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	13.518	8.390	8.339	4.788	4.850	1.990	3.354	20.385	18.428	13.580	0.000	0.000	0.000	0.000	0.070	0.021	0.029	0.000
Stdev	6.436	3.371	3.629	3.060	2.665	0.000	0.872	7.462	6.162	5.280	0.906	0.095	0.021	0.000	0.123	2.250	2.275	0.134
Prev(%)	100.000	99.747	100.000	88.235	96.277	100.000	100.000	93.750	100.000	99.061	4.955	8.333	9.375	0.000	18.182	14.286	11.616	5.091

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