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Taxonomy: V4.2   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.02   |  Viruses: V1.2

Species: Actinomyces graevenitzii (HMT-866)

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Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Actinomycetales; Actinomycetaceae; Actinomyces; Actinomyces graevenitzii
Each rank name is a link to abundance plots at that rank:
Hide Legend
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Eren V1-V3 www.pnas.org (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.0050.0010.0200.1420.9250.4551.7771.4552.5060.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0250.000
90thp0.0000.0000.0680.3682.1591.0993.7864.3076.1600.000
Stdev0.0370.0030.0540.3262.0440.9903.1222.1703.9500.000
Prev(%)3.8963.89620.77959.74085.71479.22185.71488.31293.5060.000
Eren V3-V5 www.pnas.org (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.0190.0060.0220.0800.4700.2100.7610.6181.0270.000
10thp0.0000.0000.0000.0000.0000.0000.0100.0000.0000.000
90thp0.0000.0000.0310.2921.0470.4421.6221.6352.3440.000
Stdev0.1750.0610.1010.1641.1120.4791.1871.1061.7690.000
Prev(%)3.3784.73016.21650.00081.75769.59589.86585.13587.8380.699
Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0000.0000.0390.0001.0050.4631.7661.3612.1270.0000.0000.0000.0760.0770.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0670.0100.0580.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0730.0002.2841.4784.4093.4334.3520.0000.0000.0000.0640.0980.0000.0000.0000.000
Stdev0.0000.0000.1660.0002.0591.0062.3552.1123.0710.0000.0000.0000.3250.4990.0000.0000.0000.000
Prev(%)0.0000.00032.8670.00088.59173.07791.96490.00095.4840.0000.0000.00017.24117.5120.0000.0000.0000.000
Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0000.0000.0000.2541.6180.6222.2021.7002.4660.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0640.0000.0820.0520.1470.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.7493.8051.6115.5704.4875.9970.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0000.0000.0000.4542.3261.1072.7372.3752.9360.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)0.0000.0000.00061.04292.58385.11991.58993.18795.8640.0000.0000.0000.0000.0000.0000.0000.0000.000
Dewhirst (35x9) (not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.0030.0030.0330.0810.3220.5690.9050.6890.8060.001
10thp0.0000.0000.0000.0000.0140.0070.0720.0460.0010.000
90thp0.0050.0060.1050.2751.0891.7542.1481.0521.7060.001
Stdev0.0090.0110.0620.1420.4380.9561.3091.3191.5430.002
Prev(%)29.73026.47158.14071.42992.85796.00096.970100.00092.50010.000
Human Microbiome Project Metaphlan (not published) (data from healthy subjects)
No Notes

SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.0010.0070.0010.0230.1430.0500.3521.3841.7702.3200.0200.0000.0030.0000.0000.0000.0090.010
10thp0.0000.0000.0000.0000.0000.0500.0470.0450.1420.2400.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0760.4050.0500.9202.9106.2785.4900.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0060.0860.0040.0600.2940.0000.4071.6972.6552.2500.1340.0000.0180.0000.0000.0000.0900.169
Prev(%)4.1673.0304.16723.52952.926100.000100.00087.500100.00097.4183.6040.0003.1250.0000.0000.0003.0301.818