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Taxonomy: V4.2   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.02   |  Viruses: V1.2

Species: Actinomyces massiliensis (HMT-852)

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Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Actinomycetales; Actinomycetaceae; Actinomyces; Actinomyces massiliensis
Each rank name is a link to abundance plots at that rank:
Hide Legend
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Eren V1-V3 www.pnas.org (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.4460.5360.0240.0080.0050.0040.0030.0010.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp1.2261.4700.0370.0270.0170.0000.0000.0000.0000.000
Stdev0.5580.7420.1210.0240.0150.0210.0180.0060.0020.000
Prev(%)77.92280.51920.77918.18214.2869.0912.5975.1951.2990.000
Eren V3-V5 www.pnas.org (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.1210.1310.0030.0050.0030.0010.0010.0010.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.3000.3120.0000.0170.0000.0000.0000.0000.0000.000
Stdev0.2550.2220.0240.0200.0130.0070.0080.0040.0010.000
Prev(%)62.83866.8924.05412.1626.7574.0542.7032.0270.6760.000
Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.5360.6610.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp1.5321.6880.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.6980.8180.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)84.76889.4040.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.5860.7480.0940.0430.0000.0000.0000.0000.0000.0140.0230.0290.0610.0000.0000.0000.0000.000
10thp0.0200.0270.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp1.5651.8960.1620.1300.0000.0000.0000.0000.0000.0360.0000.0000.1360.0000.0000.0000.0000.000
Stdev0.7760.9030.4530.1010.0000.0000.0000.0000.0000.0770.1830.1780.2120.0000.0000.0000.0000.000
Prev(%)92.59393.90227.65436.4760.0000.0000.0000.0000.00013.7939.5548.64221.3790.0000.0000.0000.0000.000
Dewhirst (35x9) (not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.1760.1870.0100.0040.0080.0010.0010.0000.0000.000
10thp0.0000.0090.0000.0000.0000.0000.0000.0000.0000.000
90thp0.4630.4510.0120.0140.0160.0030.0030.0000.0000.000
Stdev0.3620.3860.0260.0070.0210.0020.0050.0010.0020.000
Prev(%)77.02791.17644.18645.71446.42922.00021.2126.4525.0000.000
Human Microbiome Project Metaphlan (not published) (data from healthy subjects)
No Notes

SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)1.1231.6820.3250.3250.0500.0000.0150.0000.0010.0010.0160.0010.0410.0000.0000.1180.0040.000
10thp0.1010.1200.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp2.2154.2201.1720.6140.1200.0000.0360.0000.0000.0000.0000.0000.0000.0000.0000.0070.0000.000
Stdev1.2041.8940.7120.8820.1740.0000.0420.0000.0040.0070.1760.0060.2320.0000.0000.4380.0510.000
Prev(%)91.66795.96079.16747.05922.8720.00012.5000.0004.0002.3473.6044.1673.1250.0000.00014.2861.5150.000