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Taxonomy: V4.0   |  16S rRNA RefSeq: V16.02   |  Genomic RefSeq: V11.01
Species: Fusobacterium hwasookii (HMT-953)
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Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium hwasookii
Oral:
SUBP-- Subgingival Plaque SUPP -- Supragingival Plaque PERIO -- Periodontal AKE -- Attached Keratinized Gingiva BMU -- Buccal Mucosa
HPA -- Hard Palate SAL -- Saliva THR -- Throat PTO -- Palatine Tonsils TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease RRC -- R_Retroauricular Crease LAF -- L_Antecubital Fossa RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus MVA -- Mid Vagina PFO -- Posterior Fornix
Gut:
STO -- Stool
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
** View Notes (mouse over) **
Notes:
Reads equidistant to HMT-202 and HMT-953 were assigned to each taxon in proportion to the abundance of HMT-202 and HMT-953 individually at these sites (AKE,BMU,PTO,SAL,SUPP).

Reads equidistant to HMT-201 and HMT-953 were assigned to each taxon in proportion to the abundance of HMT-201 and HMT-953 individually at this body site (SUBP).

Some of the reads equidistant from these taxa (201-202-953) are included in HMT-953 because they are too close to differentiate at this site (SUPP).

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.2890.3750.0300.0360.0000.0430.0150.1910.0000.0000.0040.0030.0040.0050.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.8211.0960.0600.1010.0000.1430.0280.3010.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.7230.8590.0870.1030.0000.0950.0720.8400.0000.0000.0420.0370.0450.0450.0000.0000.0000.000
Prev(%)83.44478.80833.56639.7260.00040.00019.34576.0000.0000.0003.1614.2491.7243.2260.0000.0000.0000.000

HMP 16S RefSeq (V3-V5) (not published)
** View Notes (mouse over) **
Notes:
Reads equidistant to HMT-202 and HMT-953 were assigned to each taxon in proportion to the abundance of HMT-202 and HMT-953 individually at this body site (SUPP).

Some of the reads equidistant from these taxa (202-370-953) are included in HMT-953 because they are too close to differentiate at this site (SUPP).

Some of the reads equidistant from these taxa (202-203-370-953) are included in HMT-953 because they are too close to differentiate at this site (SUPP).

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0000.0500.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.1130.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0000.1480.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)0.00087.5610.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000

Dewhirst (35x9) (not published)
** View Notes (mouse over) **
Notes:
Reads equally close to HMT 202 and 953 were assigned half to each taxon.



SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.3260.4860.0590.1410.0990.0720.0700.1710.0230.001
10thp0.0000.0130.0000.0000.0040.0020.0020.0010.0000.000
90thp0.8411.4440.2020.3160.2940.1520.1590.3330.0550.000
Stdev0.6560.7360.1170.3260.1680.1350.1580.4280.0530.002
Prev(%)89.18994.11879.07080.00092.85790.00093.93990.32370.0005.000

HMP Metaphlan (not published)
No Notes
SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.0720.1510.0000.0110.0240.0000.0130.0150.0060.0170.0020.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.1270.4300.0000.0080.0150.0000.0500.0100.0180.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.1290.4390.0000.0410.1310.0000.0230.0550.0190.2170.0290.0000.0000.0000.0000.0000.0000.000
Prev(%)50.00042.6770.00011.76510.3720.00025.00012.50012.0008.9200.9010.0000.0000.0000.0000.0000.0000.000

Eren V1-V3 www.pnas.org
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.1460.1620.0600.0230.0060.0320.0050.0190.0070.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.4970.5270.0410.0680.0240.1060.0000.0390.0210.000
Stdev0.2650.3770.4020.0500.0140.0720.0220.0740.0220.000
Prev(%)57.14349.35116.88335.06518.18231.1697.79222.07816.8830.000

Eren V3-V5 www.pnas.org
** View Notes (mouse over) **
Notes:
Reads equally close to F. hwasookii and F. sp. HMT 370 were assigned half to each taxon.

Reads equally close to F. hwasookii, F. periodonticum, and F. sp. HMT 370 were assigned one-third to each taxon.



SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.2330.2780.0540.0410.0090.0600.0320.0790.0160.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.7270.8970.0470.0900.0260.1640.0740.1420.0280.000
Stdev0.4250.5530.3220.1180.0220.1110.1020.2830.0570.000
Prev(%)62.16263.51433.78450.00026.35156.08146.62250.67637.8380.000