HOMD ::Species:Streptococcus anginosus

Species: Streptococcus anginosus (HMT-543)

Full Lineage: Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus Each rank name is a link to abundance plots at that rank:

LINKS: Ecology Home | HMT-543: Body Sites Data | HMT-543: Taxon Description | Life Page: Streptococcus anginosus

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

HMP 16S RefSeq (V1-V3) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.079	0.061	0.019	0.050	0.000	0.000	0.074	0.181	0.000	0.014	0.000	0.000	0.009	0.010	0.206	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.213	0.186	0.020	0.159	0.000	0.000	0.083	0.436	0.000	0.000	0.000	0.000	0.000	0.000	0.099	0.000	0.000	0.000
Stdev	0.229	0.136	0.102	0.147	0.000	0.000	0.362	0.692	0.000	0.161	0.000	0.000	0.058	0.060	0.806	0.000	0.000	0.000
Prev(%)	38.411	50.331	13.287	33.562	0.000	0.000	25.893	46.000	0.000	5.667	0.000	0.000	4.023	5.530	29.577	0.000	0.000	0.000

HMP 16S RefSeq (V3-V5) (not published)

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Notes:
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.308	1.501	0.021	0.133	0.017	0.021	0.046	0.047	0.008	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.612	2.549	0.055	0.222	0.060	0.053	0.098	0.114	0.020	0.000
Stdev	1.036	5.025	0.040	0.433	0.031	0.027	0.135	0.105	0.016	0.000
Prev(%)	77.027	76.471	67.442	77.143	42.857	70.000	63.636	67.742	47.500	0.000

HMP Metaphlan (not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.040	0.014	0.131	0.005	0.011	0.000	0.000	0.372	0.064	0.001	0.000	0.000	0.000	0.000	0.000	0.000	0.004	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.055	0.030	0.337	0.004	0.000	0.000	0.000	0.000	0.036	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.139	0.051	0.276	0.019	0.091	0.000	0.000	1.488	0.289	0.008	0.000	0.000	0.000	0.000	0.000	0.000	0.033	0.000
Prev(%)	25.000	19.697	50.000	11.765	6.915	0.000	0.000	6.250	20.000	3.991	0.000	0.000	0.000	0.000	0.000	0.000	1.515	0.000

Eren V1-V3 www.pnas.org

No Notes

Eren V3-V5 www.pnas.org

** View Notes (mouse over) **

Notes:
Reads equally close to S. salivarius, S. thermophilus, S. vestibularis, and S. anginosus were assigned half to S. salivarius and half to S. anginosus.

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.003	0.003	0.001	0.007	0.054	0.022	0.082	0.066	0.205	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.021	0.049	0.034	0.063	0.072	0.221	0.000
Stdev	0.028	0.014	0.006	0.026	0.446	0.129	0.756	0.373	1.386	0.000
Prev(%)	4.730	7.432	7.432	10.811	30.405	23.649	32.432	39.189	66.216	0.000

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