Species: Streptococcus peroris (HMT-728)
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.000 | 0.000 | 0.011 | 0.012 | 0.027 | 0.031 | 0.036 | 0.056 | 0.059 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.017 | 0.016 | 0.043 | 0.075 | 0.022 | 0.038 | 0.039 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.000 | 0.000 | 0.072 | 0.060 | 0.101 | 0.100 | 0.219 | 0.260 | 0.278 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 0.000 | 0.000 | 22.378 | 19.863 | 27.517 | 29.231 | 16.964 | 33.333 | 34.839 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
HMP 16S RefSeq (V3-V5) (not published)
No Notes
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.062 | 0.087 | 0.349 | 0.387 | 0.375 | 0.344 | 0.429 | 0.324 | 0.212 | 0.000 |
| 10thp | 0.002 | 0.008 | 0.026 | 0.050 | 0.043 | 0.050 | 0.086 | 0.033 | 0.055 | 0.000 |
| 90thp | 0.215 | 0.166 | 0.839 | 0.986 | 1.094 | 0.736 | 0.985 | 0.698 | 0.406 | 0.000 |
| Stdev | 0.113 | 0.138 | 0.498 | 0.374 | 0.479 | 0.394 | 0.526 | 0.413 | 0.375 | 0.000 |
| Prev(%) | 91.892 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 96.774 | 100.000 | 0.000 |
HMP Metaphlan (not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.000 | 0.000 | 0.000 | 0.009 | 0.007 | 0.000 | 0.107 | 0.200 | 0.037 | 0.060 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.258 | 0.675 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.000 | 0.001 | 0.000 | 0.036 | 0.075 | 0.000 | 0.304 | 0.554 | 0.184 | 0.377 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 0.000 | 0.505 | 0.000 | 5.882 | 2.128 | 0.000 | 12.500 | 12.500 | 4.000 | 6.573 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
Eren V1-V3 www.pnas.org
** View Notes (mouse over) **
Notes:
reads equally close to S. parasanguinis clade 411, S. peroris, and S. sp. HMT 057 were assigned one third to each taxon
reads equally close to S. parasanguinis clade 411,S. peroris, S. sp. HMT 056, and S. sp. HMT 057 were assigned one fourth to each taxon
reads equally close to S. parasanguinis clade 411, S. peroris, and S. sp. HMT 057 were assigned one third to each taxon
reads equally close to S. parasanguinis clade 411,S. peroris, S. sp. HMT 056, and S. sp. HMT 057 were assigned one fourth to each taxon
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.002 | 0.002 | 0.006 | 0.017 | 0.049 | 0.037 | 0.062 | 0.061 | 0.129 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.003 | 0.000 |
| 90thp | 0.006 | 0.008 | 0.017 | 0.049 | 0.118 | 0.070 | 0.159 | 0.123 | 0.366 | 0.000 |
| Stdev | 0.003 | 0.005 | 0.015 | 0.034 | 0.086 | 0.119 | 0.119 | 0.120 | 0.233 | 0.000 |
| Prev(%) | 20.779 | 20.779 | 29.870 | 62.338 | 80.519 | 51.948 | 59.740 | 76.623 | 89.610 | 1.299 |
Eren V3-V5 www.pnas.org
** View Notes (mouse over) **
Notes:
Reads equally close to S. mitis, S. infantis, S. lactarius, S. oralis, S. peroris, and S. sp. HMT 061, 064, 074, and 423 were divided equally among taxa.
Reads equally close to S. mitis, S. infantis, S. lactarius, S. oralis, S. peroris, and S. sp. HMT 061, 064, 074, and 423 were divided equally among taxa.
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.467 | 0.670 | 2.381 | 2.608 | 1.036 | 0.299 | 0.638 | 0.617 | 0.104 | 0.000 |
| 10thp | 0.076 | 0.170 | 0.634 | 0.767 | 0.249 | 0.084 | 0.046 | 0.044 | 0.012 | 0.000 |
| 90thp | 0.960 | 1.337 | 4.596 | 4.710 | 2.263 | 0.565 | 1.589 | 1.597 | 0.214 | 0.001 |
| Stdev | 0.412 | 0.500 | 1.657 | 1.496 | 0.882 | 0.249 | 0.938 | 0.841 | 0.131 | 0.002 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 97.973 | 11.888 |
