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16S rRNA RefSeq: V15.22    Genomic RefSeq: V9.15
Species: Streptococcus salivarius
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Full Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus salivarius
No Notes
Notes:

reads equally close to S. salivarius and S. vestibularis were assigned to S.salivarius, except for oligotypes V1V3_291 and V1V3_333 which were assigned to S. vestibularis

percent abundance
SubPSupPKGBMHPSVTHPTTDST
Avg0.1420.0894.1642.7536.9622.9437.9537.8648.9440.017
10thp0.0000.0000.0000.1000.5310.2690.6310.6610.9870.000
90thp0.2000.17612.0986.18618.6037.56819.21215.79220.2180.052
Stdev0.6070.20711.0925.2698.2643.1748.2358.3158.3240.042
Prev54.54558.44276.62394.805100.00094.80598.70198.70198.70124.675
Notes:

Reads equally close to S. salivarius, S. thermophilus, and S. vestibularis were assigned to S. salivarius.

Reads equally close to S. salivarius, S. thermophilus, S. vestibularis, and S. anginosus were assigned half to S. salivarius and half to S. anginosus.

percent abundance
SubPSupPKGBMHPSVTHPTTDST
Avg0.1170.0692.4942.4936.9862.9376.7256.0458.5270.013
10thp0.0000.0000.0000.0690.5170.2390.4470.3450.5500.000
90thp0.2020.1885.6136.31618.0047.12316.56612.89621.8500.040
Stdev0.5070.1407.9904.5138.4303.6226.8497.4598.7920.030
Prev43.91950.00074.32495.27098.64998.64998.64997.97398.64926.573
From: Dewhirst 35x9 data (not published yet)
Notes:

Reads equally close to S. salivarius and S. vestibularis were assigned to S. salivarius.

Reads equally close to S. thermophilus and S. salivarius were assigned to S. salivarius.

percent abundance
SubPSupPKGBMHPSVTHPTTDNS
Avg0.5340.7535.1684.96610.8618.87711.2299.2297.9760.019
10thp0.0110.0090.0280.2371.0000.1100.9290.7320.1260.000
90thp1.2640.87015.23511.46525.90624.97624.78321.63321.7260.042
Stdev1.3802.66710.8696.59010.11911.0329.6088.5219.0130.053
Prev100.000100.000100.000100.000100.000100.000100.000100.000100.00020.000