Species: Streptococcus sp._HMT_057
Download Options
BM - Buccal Mucosa
KG - Keratinized Gingiva
HP - Hard Palate
TD - Tongue Dorsum
PT - Palatine Tonsils
TH - Throat
SV - Saliva
SupP - Supra-gingival Plaque
SubP - Sub-gingival Plaque
NS - Nasal
ST - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
|
|
|
|
|
Notes:
reads equally close to S. parasanguinis clade 411, S. peroris, and S. sp. HMT 057 were assigned one third to each taxon
reads equally close to S. parasanguinis clade 411,S. peroris, S. sp. HMT 056, and S. sp. HMT 057 were assigned one fourth to each taxon
|
percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
|---|
| Avg | 0.002 | 0.002 | 0.006 | 0.017 | 0.049 | 0.037 | 0.062 | 0.061 | 0.129 | 0.000 |
|---|
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.003 | 0.000 |
|---|
| 90thp | 0.006 | 0.008 | 0.017 | 0.049 | 0.118 | 0.070 | 0.159 | 0.123 | 0.366 | 0.000 |
|---|
| Stdev | 0.003 | 0.005 | 0.015 | 0.034 | 0.086 | 0.119 | 0.119 | 0.120 | 0.233 | 0.000 |
|---|
| Prev | 20.779 | 20.779 | 29.870 | 62.338 | 80.519 | 51.948 | 59.740 | 76.623 | 89.610 | 1.299 |
|---|
|
|
|
|
|
Notes:
Reads equally close to S. australis, S. cristatus clade 578, S. parasanguinis clades 411 and 721, S. sinensis, and S. sp. HMT 057 and 066 were divided equally among taxa.
|
percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
|---|
| Avg | 0.049 | 0.073 | 0.032 | 0.163 | 0.495 | 0.311 | 0.476 | 0.419 | 0.849 | 0.001 |
|---|
| 10thp | 0.000 | 0.000 | 0.000 | 0.015 | 0.094 | 0.057 | 0.107 | 0.077 | 0.184 | 0.000 |
|---|
| 90thp | 0.119 | 0.159 | 0.099 | 0.416 | 1.050 | 0.667 | 1.016 | 0.936 | 1.746 | 0.003 |
|---|
| Stdev | 0.089 | 0.112 | 0.071 | 0.203 | 0.445 | 0.326 | 0.395 | 0.384 | 0.737 | 0.004 |
|---|
| Prev | 79.054 | 86.486 | 56.081 | 99.324 | 100.000 | 100.000 | 99.324 | 97.973 | 100.000 | 16.084 |
|---|
|
|
|
|
From: Dewhirst 35x9 data (not published yet)
|
Notes:
Reads equally close to HMT 057 and 411 were assigned half to each taxon.
|
percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | NS |
|---|
| Avg | 0.004 | 0.008 | 0.307 | 0.134 | 0.202 | 0.433 | 0.492 | 0.390 | 0.693 | 0.000 |
|---|
| 10thp | 0.000 | 0.000 | 0.000 | 0.002 | 0.012 | 0.035 | 0.042 | 0.023 | 0.026 | 0.000 |
|---|
| 90thp | 0.013 | 0.022 | 1.478 | 0.491 | 0.557 | 1.023 | 1.229 | 1.078 | 1.718 | 0.000 |
|---|
| Stdev | 0.007 | 0.014 | 0.686 | 0.203 | 0.237 | 0.501 | 0.639 | 0.583 | 1.142 | 0.000 |
|---|
| Prev | 68.571 | 55.882 | 75.000 | 88.235 | 100.000 | 100.000 | 100.000 | 96.774 | 100.000 | 0.000 |
|---|
|
|
