Species: Streptococcus vestibularis (HMT-021)
Download Options
Hide Legend
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.102 | 0.063 | 2.966 | 1.500 | 2.771 | 0.359 | 0.509 | 0.668 | 0.718 | 0.029 | 0.019 | 0.029 | 0.075 | 0.082 | 0.000 | 0.000 | 0.058 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.016 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.129 | 0.132 | 8.253 | 5.346 | 8.764 | 0.882 | 1.162 | 1.970 | 1.397 | 0.053 | 0.021 | 0.032 | 0.238 | 0.158 | 0.000 | 0.000 | 0.024 | 0.000 |
| Stdev | 0.536 | 0.150 | 8.829 | 2.834 | 6.579 | 0.802 | 1.270 | 1.710 | 2.133 | 0.124 | 0.101 | 0.200 | 0.199 | 0.407 | 0.000 | 0.000 | 0.331 | 0.000 |
| Prev(%) | 47.020 | 62.914 | 74.126 | 92.466 | 89.262 | 63.846 | 70.833 | 81.333 | 83.226 | 23.333 | 14.368 | 17.847 | 27.011 | 21.659 | 0.000 | 0.000 | 28.947 | 0.000 |
HMP 16S RefSeq (V3-V5) (not published)
No Notes
Dewhirst (35x9) (not published)
** View Notes (mouse over) **
Notes:
Reads equally close to S. salivarius and S. vestibularis were assigned to S. salivarius.
Reads equally close to S. salivarius and S. vestibularis were assigned to S. salivarius.
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.041 | 0.032 | 0.529 | 0.261 | 0.252 | 0.038 | 0.037 | 0.018 | 0.013 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.003 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.047 | 0.030 | 1.821 | 0.594 | 0.630 | 0.116 | 0.068 | 0.052 | 0.037 | 0.000 |
| Stdev | 0.142 | 0.117 | 1.413 | 0.630 | 0.725 | 0.076 | 0.071 | 0.023 | 0.021 | 0.000 |
| Prev(%) | 47.297 | 47.059 | 67.442 | 91.429 | 82.143 | 74.000 | 84.848 | 83.871 | 70.000 | 0.000 |
HMP Metaphlan (not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.027 | 0.011 | 0.021 | 0.294 | 0.909 | 0.050 | 0.026 | 0.087 | 0.012 | 0.006 | 0.042 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.050 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.014 | 0.030 | 0.000 | 0.798 | 2.485 | 0.050 | 0.078 | 0.005 | 0.044 | 0.020 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.092 | 0.042 | 0.083 | 0.657 | 2.488 | 0.000 | 0.044 | 0.347 | 0.031 | 0.022 | 0.624 | 0.002 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 12.500 | 14.394 | 8.333 | 47.059 | 51.064 | 100.000 | 37.500 | 12.500 | 16.000 | 17.606 | 0.450 | 4.167 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.182 |
Eren V1-V3 www.pnas.org
** View Notes (mouse over) **
Notes:
reads equally close to S. salivarius and S. vestibularis were assigned to S.salivarius, except for oligotypes V1V3_291 and V1V3_333 which were assigned to S. vestibularis
reads equally close to S. salivarius and S. vestibularis were assigned to S.salivarius, except for oligotypes V1V3_291 and V1V3_333 which were assigned to S. vestibularis
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.004 | 0.003 | 0.168 | 0.133 | 0.159 | 0.019 | 0.038 | 0.067 | 0.074 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.562 | 0.217 | 0.209 | 0.069 | 0.126 | 0.182 | 0.176 | 0.000 |
| Stdev | 0.017 | 0.010 | 0.503 | 0.425 | 0.580 | 0.038 | 0.058 | 0.129 | 0.137 | 0.000 |
| Prev(%) | 9.091 | 9.091 | 36.364 | 66.234 | 67.532 | 29.870 | 45.455 | 58.442 | 74.026 | 0.000 |
Eren V3-V5 www.pnas.org
No Notes
