Subspecies: subsp._polymorphum
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BM - Buccal Mucosa
KG - Keratinized Gingiva
HP - Hard Palate
TD - Tongue Dorsum
PT - Palatine Tonsils
TH - Throat
SV - Saliva
SupP - Supra-gingival Plaque
SubP - Sub-gingival Plaque
NS - Nasal
ST - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
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Notes:
reads equally close to F. nucleatum subsp. polymorphum and F. nucleatum subsp. vincentii were assigned half to each taxon
reads equally close to F. nucleatum subsp. polymorphum, F. nucleatum subsp. vincentii, and F. polymorphum were assigned one third to each taxon
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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| Avg | 0.659 | 0.611 | 0.199 | 0.143 | 0.022 | 0.099 | 0.127 | 0.187 | 0.015 | 0.000 |
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| 10thp | 0.064 | 0.017 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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| 90thp | 1.503 | 1.751 | 0.723 | 0.277 | 0.066 | 0.274 | 0.079 | 0.216 | 0.043 | 0.000 |
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| Stdev | 0.571 | 0.832 | 0.408 | 0.303 | 0.032 | 0.130 | 0.812 | 0.969 | 0.031 | 0.000 |
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| Prev | 97.403 | 96.104 | 75.325 | 83.117 | 62.338 | 76.623 | 50.649 | 74.026 | 45.455 | 0.000 |
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Notes:
Reads equally close to F. nucleatum subsp. nucleatum,F. nucleatum subsp. polymorphum, and F. sp. HMT 203 were assigned one-third to each taxon.
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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| Avg | 1.481 | 1.519 | 0.338 | 0.203 | 0.043 | 0.227 | 0.069 | 0.120 | 0.048 | 0.000 |
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| 10thp | 0.106 | 0.124 | 0.000 | 0.013 | 0.000 | 0.021 | 0.000 | 0.004 | 0.000 | 0.000 |
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| 90thp | 3.633 | 3.547 | 1.131 | 0.452 | 0.113 | 0.520 | 0.130 | 0.225 | 0.090 | 0.000 |
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| Stdev | 1.347 | 1.331 | 0.608 | 0.353 | 0.054 | 0.230 | 0.154 | 0.291 | 0.112 | 0.000 |
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| Prev | 98.649 | 99.324 | 87.838 | 97.297 | 79.054 | 93.243 | 84.459 | 90.541 | 85.135 | 1.399 |
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From: Dewhirst 35x9 data (not published yet)
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Notes:
Reads equally close to HMT 202 and 953 were assigned half to each taxon.
Reads equally close to HMT 200 and 202 were assigned half to each taxon.
Reads equally close to HMT 201 and 202 were assigned half to each taxon.
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | NS |
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| Avg | 1.824 | 4.929 | 0.381 | 0.723 | 0.578 | 0.185 | 0.291 | 0.352 | 0.082 | 0.002 |
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| 10thp | 0.006 | 0.188 | 0.006 | 0.003 | 0.013 | 0.007 | 0.013 | 0.000 | 0.003 | 0.000 |
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| 90thp | 6.247 | 16.954 | 1.140 | 1.855 | 2.631 | 0.437 | 0.481 | 0.482 | 0.112 | 0.000 |
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| Stdev | 2.784 | 6.809 | 0.615 | 1.369 | 1.109 | 0.272 | 0.622 | 1.163 | 0.248 | 0.008 |
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| Prev | 100.000 | 100.000 | 97.222 | 91.176 | 100.000 | 91.667 | 96.970 | 87.097 | 97.059 | 5.000 |
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