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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

BAKTAGenome Explorer: Alistipes shahii (GCA_015558405.1)

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BAKTA Annotations for GCA_015558405.1
Genome Selected: Alistipes shahii
ContigsBases CDSrRNA tmRNAtRNA
55 3561746 2994 3 1 48
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Annotation Table [page:13]    |    Number of Records Found: 6116 [13 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  11  12  13  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 BAKTA
Gene		 BAKTA
GeneProduct
6001 JADMNV010000033.1 GCA015558405_01894 CDS open 3460-4989 _na     509_aa Amino acid permease
6002 JADMNV010000033.1 GCA015558405_01895 CDS open 5137-6120 _na     327_aa glsA glutaminase A
6003 JADMNV010000033.1 GCA015558405_01896 CDS open 6204-6758 _na     184_aa Outer membrane protein beta-barrel domain-containing protein
6004 JADMNV010000033.1 GCA015558405_01897 CDS open 6920-7984 _na     354_aa Lipopolysaccharide biosynthesis protein
6005 JADMNV010000033.1 GCA015558405_01890 gene open 671-871
6006 JADMNV010000033.1 GCA015558405_01891 gene open 1042-1206
6007 JADMNV010000033.1 GCA015558405_01892 gene open 1575-2129 yotD
6008 JADMNV010000033.1 GCA015558405_01893 gene open 2388-3320
6009 JADMNV010000033.1 GCA015558405_01894 gene open 3460-4989
6010 JADMNV010000033.1 GCA015558405_01895 gene open 5137-6120 glsA
6011 JADMNV010000033.1 GCA015558405_01896 gene open 6204-6758
6012 JADMNV010000033.1 GCA015558405_01897 gene open 6920-7984
6013 JADMNV010000034.1 GCA015558405_01898 CDS open 106-582 _na     158_aa AAA family ATPase
6014 JADMNV010000034.1 GCA015558405_01899 CDS open 551-1567 _na     338_aa DUF3871 domain-containing protein
6015 JADMNV010000034.1 GCA015558405_01900 CDS open 1946-2683 _na     245_aa putative conserved protein
6016 JADMNV010000034.1 GCA015558405_01901 CDS open 3878-4612 _na     244_aa hypothetical protein
6017 JADMNV010000034.1 GCA015558405_01902 CDS open 4688-5263 _na     191_aa VCBS repeat-containing protein
6018 JADMNV010000034.1 GCA015558405_01903 CDS open 5317-6123 _na     268_aa hypothetical protein
6019 JADMNV010000034.1 GCA015558405_01898 gene open 106-582
6020 JADMNV010000034.1 GCA015558405_01899 gene open 551-1567
6021 JADMNV010000034.1 GCA015558405_01900 gene open 1946-2683
6022 JADMNV010000034.1 GCA015558405_01901 gene open 3878-4612
6023 JADMNV010000034.1 GCA015558405_01902 gene open 4688-5263
6024 JADMNV010000034.1 GCA015558405_01903 gene open 5317-6123
6025 JADMNV010000035.1 GCA015558405_01904 CDS open 84-1517 _na     477_aa hypothetical protein
6026 JADMNV010000035.1 GCA015558405_01905 CDS open 2127-2945 _na     272_aa hypothetical protein
6027 JADMNV010000035.1 GCA015558405_01906 CDS open 3354-4634 _na     426_aa putative dehydrogenases and related proteins
6028 JADMNV010000035.1 GCA015558405_01907 CDS open 4721-5836 _na     371_aa DUF1080 domain-containing protein
6029 JADMNV010000035.1 GCA015558405_01904 gene open 84-1517
6030 JADMNV010000035.1 GCA015558405_01905 gene open 2127-2945
6031 JADMNV010000035.1 GCA015558405_01906 gene open 3354-4634
6032 JADMNV010000035.1 GCA015558405_01907 gene open 4721-5836
6033 JADMNV010000036.1 GCA015558405_01908 gene open 8-1531 rrs
6034 JADMNV010000036.1 GCA015558405_01909 gene open 1888-4760 rrl
6035 JADMNV010000036.1 GCA015558405_01910 gene open 4873-4986 rrf
6036 JADMNV010000036.1 GCA015558405_01908 rRNA open 8-1531 rrs 16S ribosomal RNA
6037 JADMNV010000036.1 GCA015558405_01909 rRNA open 1888-4760 rrl 23S ribosomal RNA
6038 JADMNV010000036.1 GCA015558405_01910 rRNA open 4873-4986 rrf 5S ribosomal RNA
6039 JADMNV010000037.1 GCA015558405_01912 CDS open 571-1185 _na     204_aa Lipoprotein signal peptidase
6040 JADMNV010000037.1 GCA015558405_01913 CDS open 1320-3404 _na     694_aa Subtilisin-like serine proteases
6041 JADMNV010000037.1 GCA015558405_01912 gene open 571-1185
6042 JADMNV010000037.1 GCA015558405_01913 gene open 1320-3404
6043 JADMNV010000037.1 GCA015558405_01911 gene open 420-501 trnL
6044 JADMNV010000037.1 GCA015558405_01911 tRNA open 420-501 trnL tRNA-Leu(cag)
6045 JADMNV010000038.1 GCA015558405_01914 CDS open 360-2351 _na     663_aa hypothetical protein
6046 JADMNV010000038.1 GCA015558405_01915 CDS open 3000-3620 _na     206_aa GH92 family glycosyl hydrolase
6047 JADMNV010000038.1 GCA015558405_01914 gene open 360-2351
6048 JADMNV010000038.1 GCA015558405_01915 gene open 3000-3620
6049 JADMNV010000039.1 GCA015558405_01916 CDS open 86-1309 _na     407_aa site-specific integrase
6050 JADMNV010000039.1 GCA015558405_01917 CDS open 1760-3253 _na     497_aa KAP family P-loop domain-containing protein
6051 JADMNV010000039.1 GCA015558405_01916 gene open 86-1309
6052 JADMNV010000039.1 GCA015558405_01917 gene open 1760-3253
6053 JADMNV010000040.1 GCA015558405_02102 CDS open 1-192 _na     63_aa xerD Site-specific integrase
6054 JADMNV010000040.1 GCA015558405_02103 CDS open 573-1580 _na     335_aa IS110 family transposase
6055 JADMNV010000040.1 GCA015558405_02104 CDS open 2029-2547 _na     172_aa DUF3408 domain-containing protein
6056 JADMNV010000040.1 GCA015558405_02105 CDS open 3109-3291 _na     60_aa hypothetical protein
6057 JADMNV010000040.1 GCA015558405_02102 gene open 1-192 xerD
6058 JADMNV010000040.1 GCA015558405_02103 gene open 573-1580
6059 JADMNV010000040.1 GCA015558405_02104 gene open 2029-2547
6060 JADMNV010000040.1 GCA015558405_02105 gene open 3109-3291
6061 JADMNV010000041.1 GCA015558405_02106 CDS open 132-2210 _na     692_aa hypothetical protein
6062 JADMNV010000041.1 GCA015558405_02106 gene open 132-2210
6063 JADMNV010000042.1 GCA015558405_02107 gene open 130-536 Bacteroidales-2
6064 JADMNV010000042.1 GCA015558405_02107 ncRNA open 130-536 Bacteroidales-2 RNA
6065 JADMNV010000042.1 GCA015558405_02108 CDS open 836-1408 _na     190_aa dnaJ Molecular chaperone DnaJ
6066 JADMNV010000042.1 GCA015558405_02109 CDS open 1576-1845 _na     89_aa Diguanylate cyclase
6067 JADMNV010000042.1 GCA015558405_02110 CDS open 2116-2508 _na     130_aa hypothetical protein
6068 JADMNV010000042.1 GCA015558405_02111 CDS open 2525-2782 _na     85_aa hypothetical protein
6069 JADMNV010000042.1 GCA015558405_02108 gene open 836-1408 dnaJ
6070 JADMNV010000042.1 GCA015558405_02109 gene open 1576-1845
6071 JADMNV010000042.1 GCA015558405_02110 gene open 2116-2508
6072 JADMNV010000042.1 GCA015558405_02111 gene open 2525-2782
6073 JADMNV010000043.1 GCA015558405_02112 CDS open 479-1066 _na     195_aa RNA polymerase sigma-70 factor
6074 JADMNV010000043.1 GCA015558405_02113 CDS open 1317-2267 _na     316_aa DUF4974 domain-containing protein
6075 JADMNV010000043.1 GCA015558405_02114 CDS open 2470-2784 _na     104_aa STN domain-containing protein
6076 JADMNV010000043.1 GCA015558405_02112 gene open 479-1066
6077 JADMNV010000043.1 GCA015558405_02113 gene open 1317-2267
6078 JADMNV010000043.1 GCA015558405_02114 gene open 2470-2784
6079 JADMNV010000044.1 GCA015558405_02115 CDS open 567-998 _na     143_aa DUF3408 domain-containing protein
6080 JADMNV010000044.1 GCA015558405_02116 CDS open 1000-1236 _na     78_aa hypothetical protein
6081 JADMNV010000044.1 GCA015558405_02117 CDS open 1449-2210 _na     253_aa parA ParA family protein
6082 JADMNV010000044.1 GCA015558405_02115 gene open 567-998
6083 JADMNV010000044.1 GCA015558405_02116 gene open 1000-1236
6084 JADMNV010000044.1 GCA015558405_02117 gene open 1449-2210 parA
6085 JADMNV010000045.1 GCA015558405_02118 CDS open 324-1529 _na     401_aa Site-specific integrase
6086 JADMNV010000045.1 GCA015558405_02118 gene open 324-1529
6087 JADMNV010000046.1 GCA015558405_02119 CDS open 117-494 _na     125_aa Mobilization protein
6088 JADMNV010000046.1 GCA015558405_02120 CDS open 867-1385 _na     172_aa DUF3408 domain-containing protein
6089 JADMNV010000046.1 GCA015558405_02121 CDS open 1665-1787 _na     40_aa hypothetical protein
6090 JADMNV010000046.1 GCA015558405_02119 gene open 117-494
6091 JADMNV010000046.1 GCA015558405_02120 gene open 867-1385
6092 JADMNV010000046.1 GCA015558405_02121 gene open 1665-1787
6093 JADMNV010000047.1 GCA015558405_02122 CDS open 64-1632 _na     522_aa traG TraG family protein
6094 JADMNV010000047.1 GCA015558405_02122 gene open 64-1632 traG
6095 JADMNV010000048.1 GCA015558405_02123 CDS open 170-1459 _na     429_aa tnp IS1380 family IS612B transposase
6096 JADMNV010000048.1 GCA015558405_02123 gene open 170-1459 tnp
6097 JADMNV010000049.1 GCA015558405_02124 CDS open 374-1453 _na     359_aa IS110 family transposase
6098 JADMNV010000049.1 GCA015558405_02124 gene open 374-1453
6099 JADMNV010000050.1 GCA015558405_02352 CDS open 36-629 _na     197_aa Integrase catalytic domain-containing protein
6100 JADMNV010000050.1 GCA015558405_02353 CDS open 854-1366 _na     170_aa insE Insertion element IS150 protein InsJ-like helix-turn-helix domain-containing protein
6101 JADMNV010000050.1 GCA015558405_02352 gene open 36-629
6102 JADMNV010000050.1 GCA015558405_02353 gene open 854-1366 insE
6103 JADMNV010000051.1 GCA015558405_02354 CDS open 272-1075 _na     267_aa IS1 family transposase
6104 JADMNV010000051.1 GCA015558405_02354 gene open 272-1075
6105 JADMNV010000052.1 GCA015558405_02355 CDS open 126-1289 _na     387_aa IS4 family transposase
6106 JADMNV010000052.1 GCA015558405_02355 gene open 126-1289
6107 JADMNV010000053.1 GCA015558405_02356 CDS open 79-363 _na     94_aa hypothetical protein
6108 JADMNV010000053.1 GCA015558405_02357 CDS open 360-1250 _na     296_aa insO IS3 family transposase
6109 JADMNV010000053.1 GCA015558405_02356 gene open 79-363
6110 JADMNV010000053.1 GCA015558405_02357 gene open 360-1250 insO
6111 JADMNV010000054.1 GCA015558405_02358 CDS open 8-289 _na     93_aa Mobilization protein
6112 JADMNV010000054.1 GCA015558405_02359 CDS open 276-1199 _na     307_aa group II intron reverse transcriptase/maturase
6113 JADMNV010000054.1 GCA015558405_02358 gene open 8-289
6114 JADMNV010000054.1 GCA015558405_02359 gene open 276-1199
6115 JADMNV010000055.1 GCA015558405_02360 CDS open 40-828 _na     262_aa phage integrase SAM-like domain and Arm DNA-binding domain-containing protein
6116 JADMNV010000055.1 GCA015558405_02360 gene open 40-828