16S rRNA Reference Sequences

There are 6,600 HOMD RefSeqs
         representing 820 (98.1%) of the HOMD taxa.

Phage

There are 25,388 phage predictions
         associated with 5,520 (67.5%) of the HOMD genomes.

Taxa

There are 836 taxa in the HOMD database.

Naming Status
Named and Cultivated	530 (63.4%)
Named and Uncultivated	10 (1.2%)
Unnamed and Cultivated	107 (12.8%)
Phylotype	189 (22.6%)
Primary Body Site
Oral	525 (62.8%)
Nasal	22 (2.6%)
Skin	19 (2.3%)
Gut	27 (3.2%)
Vaginal	27 (3.2%)
Pathogen	23 (2.8%)
Environmental	86 (10.3%)
Reference	10 (1.2%)
Unassigned	97 (11.6%)
Phyla Represented
Bacillota	269
Pseudomonadota	139
Actinomycetota	133
Bacteroidota	133
Spirochaetota	53
Fusobacteriota	40
Patescibacteria	37
Mycoplasmatota	12
Synergistota	8
Chloroflexota	3
Chlorobiota	3
Verrucomicrobiota	2
Cyanobacteriota	1
Chlamydiota	1
(Archaea) Methanobacteriota	1
Eremiobacterota	1

Genomes

There are 8,177 genomes in HOMD
         representing 631 (75.5%) of the HOMD taxa.

Genome Assembly Level
Complete	2,240 (27.4%)
Contig	3,988 (48.8%)
Scaffold	1,806 (22.1%)
Chromosome	143 (1.7%)
MAGs
MAGs	955 (11.7%)
Contigs per Genome
Number of Contigs	Range: 1 - 771
Genome Size
Genome Size (bp)	Range: 523,632 - 9,982,772
Primary Body Site
from Oral taxa	4,849 (59.3%)
Nasal taxa	734 (9.0%)
Skin taxa	571 (7.0%)
Gut taxa	255 (3.1%)
Vaginal taxa	216 (2.6%)
Pathogen taxa	218 (2.7%)
Environmental taxa	523 (6.4%)
Reference taxa	9 (0.1%)
Unassigned	802 (9.8%)