Home
Taxonomy
Taxon Table
Life
Ecology
Taxonomy Tree
Rank Level
Body Sites
Dropped Taxa
Downloads
Version History
Genomes
Genome Table
JBrowse Viewer Tool
Genome Explorer
BLAST (All Genomes)
BLAST (Select a Genome)
CRISPR-Cas
AMR (Anti-Microbial Resistance)
Pangenomes
Downloads
Version History
Genomic Trees:
Conserved Protein (Genomic Tree)
Ribosomal Protein (Ribosomal Protein Tree)
16S rRNA Gene (Genomic 16S rRNA Gene Tree)
Proteomes
View Genomic Tree based on Conserved Proteins
All Protein Sequences Annotated from Genomes
Proteins Detected in Human Saliva (V3.1)
Genomes with Proteins Detected in Human Saliva (V3.1)
16S rRNA
RefSeq Table
RefSeq BLAST Server
16S rRNA RefSeq Phylogenetic Tree
Downloads
Version History
Animal Microbiomes
Mouse (MOMD)
Viruses
Genomes with Phages
Downloads
Batch HOMD Data
Download FASTA
HOMD FTP Site
Resources
HOMD-V4.2 Site
HOMD-V3.1 Site
Posters
Publications
Oralgen Genome Info
About Us
HOMD Help Content
How to Cite HOMD
How to Best use HOMD
Project Description
HOMD Statistics
Strains and DNA Availability
People
Publications
Contact Us
Announcements
Search
Taxonomy:
V4.3
| 16S rRNA RefSeq:
V16.03
| Genomic RefSeq:
V11.03
| Viruses:
V1.2
Search HOMD Databases
Search the Taxonomy and/or Genome Databases
Taxonomy Database
Genomes Database
Enter Search Text:
Submit
Search Genome Annotations
Searches: Whole Words Only
Scope: Gene and Gene Product
[Faster]
Searches: Whole and Partial Words
Scope: Genome-ID, Accession (Region), Protein-ID, Gene and Gene Product
[Slower]
(Grep) EventSource Streaming
(Experimental Search - substrings okay)
(SQL) EventSource Streaming
(Experimental Search - whole word only)
Select One:
PROKKA
NCBI
BAKTA
Enter Search Text:
Submit
Search the Phage Database
Searches:
geNomad
and
Cenote-Taker3
Accessions and Descriptions.
Enter Search Text:
Submit