HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Treponema denticola (GCA_000008185.1)

Select a Genome:
PROKKA Annotations for GCA_000008185.1
Genome Selected: Treponema denticola
ContigsBases CDSrRNA tmRNAtRNA
1 2843201 2575 6 1 44
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 2636 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:6]    |    Number of Records Found: 2636 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 AE017226.1 GCA_000008185.1_02501 CDS open 2680174-2681091 918_na     305_aa hypothetical protein
2502 AE017226.1 GCA_000008185.1_02502 CDS open 2681136-2682128 993_na     330_aa hypothetical protein
2503 AE017226.1 tRNA open 2682138-2682210 tRNA-Lys(ctt)
2504 AE017226.1 GCA_000008185.1_02504 CDS open 2682325-2683794 1470_na     489_aa lhgD_2 L-2-hydroxyglutarate dehydrogenase
2505 AE017226.1 GCA_000008185.1_02505 CDS open 2683791-2685119 1329_na     442_aa Ferredoxin--NADP reductase
2506 AE017226.1 GCA_000008185.1_02506 CDS open 2685112-2685504 393_na     130_aa hypothetical protein
2507 AE017226.1 GCA_000008185.1_02507 CDS open 2685488-2686090 603_na     200_aa gbuA Glycine betainecarnitine transport ATP-binding protein GbuA
2508 AE017226.1 GCA_000008185.1_02508 CDS open 2686092-2687087 996_na     331_aa lplJ_2 Lipoate-protein ligase LplJ
2509 AE017226.1 GCA_000008185.1_02509 CDS open 2687172-2687867 696_na     231_aa hypothetical protein
2510 AE017226.1 GCA_000008185.1_02510 CDS open 2687869-2688738 870_na     289_aa btuD_24 Vitamin B12 import ATP-binding protein BtuD
2511 AE017226.1 GCA_000008185.1_02511 CDS open 2688756-2689208 453_na     150_aa hypothetical protein
2512 AE017226.1 GCA_000008185.1_02512 CDS open 2689289-2690278 990_na     329_aa btuD_25 Vitamin B12 import ATP-binding protein BtuD
2513 AE017226.1 GCA_000008185.1_02513 CDS open 2690275-2691030 756_na     251_aa hypothetical protein
2514 AE017226.1 GCA_000008185.1_02514 CDS open 2691031-2691804 774_na     257_aa hypothetical protein
2515 AE017226.1 GCA_000008185.1_02515 CDS open 2691815-2693059 1245_na     414_aa entS Enterobactin exporter EntS
2516 AE017226.1 GCA_000008185.1_02516 CDS open 2693205-2693960 756_na     251_aa cbiK Sirohydrochlorin cobaltochelatase
2517 AE017226.1 GCA_000008185.1_02517 CDS open 2693962-2694630 669_na     222_aa cbiL Cobalt-precorrin-2 C(20)-methyltransferase
2518 AE017226.1 GCA_000008185.1_02518 CDS open 2694634-2695923 1290_na     429_aa cobB_2 Hydrogenobyrinate a%2Cc-diamide synthase
2519 AE017226.1 GCA_000008185.1_02519 CDS open 2695990-2697243 1254_na     417_aa hypothetical protein
2520 AE017226.1 GCA_000008185.1_02520 CDS open 2697248-2697607 360_na     119_aa hypothetical protein
2521 AE017226.1 GCA_000008185.1_02521 CDS open 2697614-2697862 249_na     82_aa hypothetical protein
2522 AE017226.1 GCA_000008185.1_02522 CDS open 2697877-2698740 864_na     287_aa Outer membrane protein
2523 AE017226.1 GCA_000008185.1_02523 CDS open 2698706-2702008 3303_na     1100_aa ileS Isoleucine--tRNA ligase
2524 AE017226.1 GCA_000008185.1_02524 CDS open 2702157-2703671 1515_na     504_aa guaB Inosine-5-monophosphate dehydrogenase
2525 AE017226.1 GCA_000008185.1_02525 CDS open 2703753-2704484 732_na     243_aa hypothetical protein
2526 AE017226.1 GCA_000008185.1_02526 CDS open 2704636-2706156 1521_na     506_aa glyA Serine hydroxymethyltransferase
2527 AE017226.1 GCA_000008185.1_02527 CDS open 2706251-2707033 783_na     260_aa pgsA_2 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
2528 AE017226.1 GCA_000008185.1_02528 CDS open 2707057-2708124 1068_na     355_aa tagO putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase
2529 AE017226.1 GCA_000008185.1_02529 CDS open 2708233-2710215 1983_na     660_aa hypothetical protein
2530 AE017226.1 GCA_000008185.1_02530 CDS open 2710350-2711690 1341_na     446_aa hypothetical protein
2531 AE017226.1 GCA_000008185.1_02531 CDS open 2711760-2712467 708_na     235_aa hypothetical protein
2532 AE017226.1 GCA_000008185.1_02532 CDS open 2712555-2713367 813_na     270_aa hypothetical protein
2533 AE017226.1 GCA_000008185.1_02533 CDS open 2713514-2714404 891_na     296_aa hypothetical protein
2534 AE017226.1 GCA_000008185.1_02534 CDS open 2714425-2715738 1314_na     437_aa thrC_2 Threonine synthase
2535 AE017226.1 GCA_000008185.1_02535 CDS open 2715744-2715878 135_na     44_aa hypothetical protein
2536 AE017226.1 GCA_000008185.1_02536 CDS open 2715875-2719480 3606_na     1201_aa hypothetical protein
2537 AE017226.1 GCA_000008185.1_02537 CDS open 2719658-2720542 885_na     294_aa hypothetical protein
2538 AE017226.1 GCA_000008185.1_02538 CDS open 2720539-2721162 624_na     207_aa hypothetical protein
2539 AE017226.1 GCA_000008185.1_02539 CDS open 2721159-2721497 339_na     112_aa hypothetical protein
2540 AE017226.1 GCA_000008185.1_02540 CDS open 2721478-2723448 1971_na     656_aa hypothetical protein
2541 AE017226.1 GCA_000008185.1_02541 CDS open 2723457-2724245 789_na     262_aa fliA RNA polymerase sigma factor FliA
2542 AE017226.1 GCA_000008185.1_02542 CDS open 2724270-2724938 669_na     222_aa hypothetical protein
2543 AE017226.1 GCA_000008185.1_02543 CDS open 2724986-2725873 888_na     295_aa ylxH_2 Flagellum site-determining protein YlxH
2544 AE017226.1 GCA_000008185.1_02544 CDS open 2725875-2727242 1368_na     455_aa srp54 Signal recognition particle 54 kDa protein
2545 AE017226.1 GCA_000008185.1_02545 CDS open 2727286-2728344 1059_na     352_aa cobD_2 Threonine-phosphate decarboxylase
2546 AE017226.1 GCA_000008185.1_02546 CDS open 2728516-2728908 393_na     130_aa hypothetical protein
2547 AE017226.1 GCA_000008185.1_02547 CDS open 2728978-2729406 429_na     142_aa hypothetical protein
2548 AE017226.1 GCA_000008185.1_02548 CDS open 2729561-2731171 1611_na     536_aa pyrG CTP synthase
2549 AE017226.1 GCA_000008185.1_02549 CDS open 2731273-2734074 2802_na     933_aa hypothetical protein
2550 AE017226.1 GCA_000008185.1_02550 CDS open 2734169-2736391 2223_na     740_aa hypothetical protein
2551 AE017226.1 GCA_000008185.1_02551 CDS open 2736464-2739169 2706_na     901_aa greA Transcription elongation factor GreA
2552 AE017226.1 GCA_000008185.1_02552 CDS open 2739188-2740126 939_na     312_aa hypothetical protein
2553 AE017226.1 GCA_000008185.1_02553 CDS open 2740400-2741173 774_na     257_aa hypothetical protein
2554 AE017226.1 GCA_000008185.1_02554 CDS open 2741192-2742835 1644_na     547_aa hypothetical protein
2555 AE017226.1 GCA_000008185.1_02555 CDS open 2742856-2744523 1668_na     555_aa hypothetical protein
2556 AE017226.1 GCA_000008185.1_02556 CDS open 2744536-2745828 1293_na     430_aa citS Citrate-sodium symporter
2557 AE017226.1 GCA_000008185.1_02557 CDS open 2745922-2747664 1743_na     580_aa hypothetical protein
2558 AE017226.1 GCA_000008185.1_02558 CDS open 2747695-2748480 786_na     261_aa hypothetical protein
2559 AE017226.1 GCA_000008185.1_02559 CDS open 2748473-2751169 2697_na     898_aa hypothetical protein
2560 AE017226.1 GCA_000008185.1_02560 CDS open 2751217-2751855 639_na     212_aa IS1595 family transposase ISFtu7
2561 AE017226.1 GCA_000008185.1_02561 CDS open 2752006-2753904 1899_na     632_aa hypothetical protein
2562 AE017226.1 GCA_000008185.1_02562 CDS open 2754087-2754989 903_na     300_aa hypothetical protein
2563 AE017226.1 GCA_000008185.1_02563 CDS open 2755226-2761762 6537_na     2178_aa hypothetical protein
2564 AE017226.1 GCA_000008185.1_02564 CDS open 2761784-2766448 4665_na     1554_aa hypothetical protein
2565 AE017226.1 GCA_000008185.1_02565 CDS open 2766670-2768034 1365_na     454_aa mdtK Multidrug resistance protein MdtK
2566 AE017226.1 GCA_000008185.1_02566 CDS open 2768152-2769051 900_na     299_aa hypothetical protein
2567 AE017226.1 GCA_000008185.1_02567 CDS open 2769148-2769675 528_na     175_aa hypothetical protein
2568 AE017226.1 GCA_000008185.1_02568 CDS open 2769647-2770438 792_na     263_aa yfiF putative tRNArRNA methyltransferase YfiF
2569 AE017226.1 GCA_000008185.1_02569 CDS open 2770717-2772969 2253_na     750_aa hypothetical protein
2570 AE017226.1 GCA_000008185.1_02570 CDS open 2773335-2773991 657_na     218_aa mupP N-acetylmuramic acid 6-phosphate phosphatase
2571 AE017226.1 GCA_000008185.1_02571 CDS open 2774011-2774637 627_na     208_aa hypothetical protein
2572 AE017226.1 GCA_000008185.1_02572 CDS open 2774642-2776000 1359_na     452_aa Magnesium transporter MgtE
2573 AE017226.1 GCA_000008185.1_02573 CDS open 2776185-2777075 891_na     296_aa hypothetical protein
2574 AE017226.1 GCA_000008185.1_02574 CDS open 2777086-2777922 837_na     278_aa hypothetical protein
2575 AE017226.1 GCA_000008185.1_02575 CDS open 2777923-2779695 1773_na     590_aa hypothetical protein
2576 AE017226.1 GCA_000008185.1_02576 CDS open 2779756-2780964 1209_na     402_aa xylB_2 Xylulose kinase
2577 AE017226.1 GCA_000008185.1_02577 CDS open 2780961-2782217 1257_na     418_aa prs Putative ribose-phosphate pyrophosphokinase
2578 AE017226.1 GCA_000008185.1_02578 CDS open 2782330-2783298 969_na     322_aa hypothetical protein
2579 AE017226.1 GCA_000008185.1_02579 CDS open 2783291-2784259 969_na     322_aa hypothetical protein
2580 AE017226.1 GCA_000008185.1_02580 CDS open 2784341-2785435 1095_na     364_aa rsgA_2 Small ribosomal subunit biogenesis GTPase RsgA
2581 AE017226.1 GCA_000008185.1_02581 CDS open 2785846-2786547 702_na     233_aa hypothetical protein
2582 AE017226.1 GCA_000008185.1_02582 CDS open 2786726-2787499 774_na     257_aa dtd3_3 D-aminoacyl-tRNA deacylase
2583 AE017226.1 GCA_000008185.1_02583 CDS open 2787503-2788513 1011_na     336_aa dus putative tRNA-dihydrouridine synthase
2584 AE017226.1 GCA_000008185.1_02584 CDS open 2788713-2789186 474_na     157_aa hypothetical protein
2585 AE017226.1 GCA_000008185.1_02585 CDS open 2789211-2789921 711_na     236_aa hypothetical protein
2586 AE017226.1 GCA_000008185.1_02586 CDS open 2790294-2791676 1383_na     460_aa hypothetical protein
2587 AE017226.1 GCA_000008185.1_02587 CDS open 2792010-2792750 741_na     246_aa hypothetical protein
2588 AE017226.1 GCA_000008185.1_02588 CDS open 2792903-2794633 1731_na     576_aa hypothetical protein
2589 AE017226.1 GCA_000008185.1_02589 CDS open 2794813-2795229 417_na     138_aa hypothetical protein
2590 AE017226.1 GCA_000008185.1_02590 CDS open 2795342-2795830 489_na     162_aa hypothetical protein
2591 AE017226.1 GCA_000008185.1_02591 CDS open 2796003-2796782 780_na     259_aa hypothetical protein
2592 AE017226.1 GCA_000008185.1_02592 CDS open 2796940-2797749 810_na     269_aa xerD_2 Tyrosine recombinase XerD
2593 AE017226.1 GCA_000008185.1_02593 CDS open 2797810-2798337 528_na     175_aa hypothetical protein
2594 AE017226.1 GCA_000008185.1_02594 CDS open 2798345-2799943 1599_na     532_aa hypothetical protein
2595 AE017226.1 GCA_000008185.1_02595 CDS open 2799971-2800786 816_na     271_aa hypothetical protein
2596 AE017226.1 GCA_000008185.1_02596 CDS open 2800783-2802225 1443_na     480_aa putative type I restriction enzymeP M protein
2597 AE017226.1 GCA_000008185.1_02597 CDS open 2802228-2805032 2805_na     934_aa hypothetical protein
2598 AE017226.1 GCA_000008185.1_02598 CDS open 2805248-2805706 459_na     152_aa hypothetical protein
2599 AE017226.1 GCA_000008185.1_02599 CDS open 2805766-2806116 351_na     116_aa hypothetical protein
2600 AE017226.1 GCA_000008185.1_02600 CDS open 2806173-2807348 1176_na     391_aa hflX GTPase HflX
2601 AE017226.1 tRNA open 2807413-2807487 tRNA-Ala(ggc)
2602 AE017226.1 GCA_000008185.1_02602 CDS open 2807542-2809254 1713_na     570_aa hypothetical protein
2603 AE017226.1 GCA_000008185.1_02603 CDS open 2809258-2809530 273_na     90_aa hypothetical protein
2604 AE017226.1 GCA_000008185.1_02604 CDS open 2809648-2810739 1092_na     363_aa hypothetical protein
2605 AE017226.1 GCA_000008185.1_02605 CDS open 2810851-2811870 1020_na     339_aa ocd Ornithine cyclodeaminase
2606 AE017226.1 GCA_000008185.1_02606 CDS open 2811988-2813607 1620_na     539_aa dppE Dipeptide-binding protein DppE
2607 AE017226.1 GCA_000008185.1_02607 CDS open 2813813-2814121 309_na     102_aa hypothetical protein
2608 AE017226.1 GCA_000008185.1_02608 CDS open 2814105-2814461 357_na     118_aa hypothetical protein
2609 AE017226.1 GCA_000008185.1_02609 CDS open 2814451-2815161 711_na     236_aa hypothetical protein
2610 AE017226.1 GCA_000008185.1_02610 CDS open 2815156-2815971 816_na     271_aa hypothetical protein
2611 AE017226.1 GCA_000008185.1_02611 CDS open 2815968-2816627 660_na     219_aa hypothetical protein
2612 AE017226.1 GCA_000008185.1_02612 CDS open 2816653-2817834 1182_na     393_aa hypothetical protein
2613 AE017226.1 GCA_000008185.1_02613 CDS open 2817827-2818861 1035_na     344_aa fliM Flagellar motor switch protein FliM
2614 AE017226.1 GCA_000008185.1_02614 CDS open 2818876-2819421 546_na     181_aa hypothetical protein
2615 AE017226.1 GCA_000008185.1_02615 CDS open 2819464-2820183 720_na     239_aa motB Motility protein B
2616 AE017226.1 GCA_000008185.1_02616 CDS open 2820185-2820964 780_na     259_aa pomA Chemotaxis protein PomA
2617 AE017226.1 GCA_000008185.1_02617 CDS open 2820986-2821183 198_na     65_aa swrD Swarming motility protein SwrD
2618 AE017226.1 GCA_000008185.1_02618 CDS open 2821209-2822600 1392_na     463_aa flgE Flagellar hook protein FlgE
2619 AE017226.1 GCA_000008185.1_02619 CDS open 2822613-2823122 510_na     169_aa hypothetical protein
2620 AE017226.1 GCA_000008185.1_02620 CDS open 2823134-2824507 1374_na     457_aa hypothetical protein
2621 AE017226.1 GCA_000008185.1_02621 CDS open 2824859-2825710 852_na     283_aa hypothetical protein
2622 AE017226.1 GCA_000008185.1_02622 CDS open 2825786-2825944 159_na     52_aa putative ABC transporter ATP-binding protein
2623 AE017226.1 GCA_000008185.1_02623 CDS open 2825990-2826319 330_na     109_aa hypothetical protein
2624 AE017226.1 GCA_000008185.1_02624 CDS open 2826336-2827190 855_na     284_aa hypothetical protein
2625 AE017226.1 GCA_000008185.1_02625 CDS open 2827504-2828445 942_na     313_aa pip Proline iminopeptidase
2626 AE017226.1 GCA_000008185.1_02626 CDS open 2828452-2829411 960_na     319_aa hypothetical protein
2627 AE017226.1 GCA_000008185.1_02627 CDS open 2829461-2829694 234_na     77_aa hypothetical protein
2628 AE017226.1 GCA_000008185.1_02628 CDS open 2829718-2830662 945_na     314_aa hypothetical protein
2629 AE017226.1 GCA_000008185.1_02629 CDS open 2830729-2832558 1830_na     609_aa putative ABC transporter ATP-binding protein
2630 AE017226.1 GCA_000008185.1_02630 CDS open 2832576-2834366 1791_na     596_aa Putative multidrug export ATP-bindingpermease protein
2631 AE017226.1 GCA_000008185.1_02631 CDS open 2834550-2836667 2118_na     705_aa pctB_3 Methyl-accepting chemotaxis protein PctB
2632 AE017226.1 tRNA open 2836732-2836804 tRNA-Gln(ctg)
2633 AE017226.1 tRNA open 2836821-2836894 tRNA-Glu(ctc)
2634 AE017226.1 GCA_000008185.1_02634 CDS open 2836978-2838687 1710_na     569_aa hypothetical protein
2635 AE017226.1 GCA_000008185.1_02635 CDS open 2838691-2839272 582_na     193_aa hypothetical protein
2636 AE017226.1 GCA_000008185.1_02636 CDS open 2839313-2842762 3450_na     1149_aa dnaE DNA polymerase III subunit alpha