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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Treponema pallidum (GCA_000008605.1)

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PROKKA Annotations for GCA_000008605.1
Genome Selected: Treponema pallidum
ContigsBases CDSrRNA tmRNAtRNA
1 1138011 1001 6 1 45
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:3]    |    Number of Records Found: 1055 [3 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
1001 AE000520.1 GCA_000008605.1_01001 CDS open 1073524-1076625 3102_na     1033_aa hypothetical protein
1002 AE000520.1 GCA_000008605.1_01002 CDS open 1076689-1076847 159_na     52_aa rubR2 Rubredoxin-2
1003 AE000520.1 GCA_000008605.1_01003 CDS open 1076802-1077167 366_na     121_aa hypothetical protein
1004 AE000520.1 GCA_000008605.1_01004 CDS open 1077304-1078257 954_na     317_aa rlpA Endolytic peptidoglycan transglycosylase RlpA
1005 AE000520.1 tRNA open 1078378-1078463 tRNA-Leu(taa)
1006 AE000520.1 GCA_000008605.1_01006 CDS open 1078616-1079425 810_na     269_aa dtd3 D-aminoacyl-tRNA deacylase
1007 AE000520.1 GCA_000008605.1_01007 CDS open 1079425-1079559 135_na     44_aa hypothetical protein
1008 AE000520.1 GCA_000008605.1_01008 CDS open 1079507-1080787 1281_na     426_aa hypothetical protein
1009 AE000520.1 tRNA open 1082508-1082584 tRNA-Ala(ggc)
1010 AE000520.1 GCA_000008605.1_01010 CDS open 1082643-1084439 1797_na     598_aa sppA Protease 4
1011 AE000520.1 GCA_000008605.1_01011 CDS open 1084473-1085861 1389_na     462_aa alsT_2 Amino-acid carrier protein AlsT
1012 AE000520.1 GCA_000008605.1_01012 CDS open 1086047-1088446 2400_na     799_aa hypothetical protein
1013 AE000520.1 GCA_000008605.1_01013 CDS open 1088735-1089295 561_na     186_aa hypothetical protein
1014 AE000520.1 GCA_000008605.1_01014 CDS open 1089435-1090535 1101_na     366_aa hypothetical protein
1015 AE000520.1 GCA_000008605.1_01015 CDS open 1090630-1091385 756_na     251_aa hypothetical protein
1016 AE000520.1 GCA_000008605.1_01016 CDS open 1091583-1092530 948_na     315_aa hypothetical protein
1017 AE000520.1 GCA_000008605.1_01017 CDS open 1092553-1093158 606_na     201_aa recR Recombination protein RecR
1018 AE000520.1 GCA_000008605.1_01018 CDS open 1093232-1094950 1719_na     572_aa ruvB_2 Holliday junction ATP-dependent DNA helicase RuvB
1019 AE000520.1 GCA_000008605.1_01019 CDS open 1095009-1096922 1914_na     637_aa gyrB DNA gyrase subunit B
1020 AE000520.1 GCA_000008605.1_01020 CDS open 1097031-1097948 918_na     305_aa thyX Flavin-dependent thymidylate synthase
1021 AE000520.1 GCA_000008605.1_01021 CDS open 1097991-1100528 2538_na     845_aa hypothetical protein
1022 AE000520.1 GCA_000008605.1_01022 CDS open 1100655-1101725 1071_na     356_aa gpsA Glycerol-3-phosphate dehydrogenase [NAD(P)+]
1023 AE000520.1 GCA_000008605.1_01023 CDS open 1101822-1102271 450_na     149_aa ndk Nucleoside diphosphate kinase
1024 AE000520.1 GCA_000008605.1_01024 CDS open 1102397-1103005 609_na     202_aa pth Peptidyl-tRNA hydrolase
1025 AE000520.1 GCA_000008605.1_01025 CDS open 1103040-1103930 891_na     296_aa sigA RNA polymerase sigma factor SigA
1026 AE000520.1 GCA_000008605.1_01026 CDS open 1104180-1104446 267_na     88_aa groS 10 kDa chaperonin
1027 AE000520.1 GCA_000008605.1_01027 CDS open 1104457-1106319 1863_na     620_aa hypothetical protein
1028 AE000520.1 GCA_000008605.1_01028 CDS open 1106357-1106782 426_na     141_aa nusB Transcription antitermination protein NusB
1029 AE000520.1 GCA_000008605.1_01029 CDS open 1106779-1107864 1086_na     361_aa surA Chaperone SurA
1030 AE000520.1 GCA_000008605.1_01030 CDS open 1107937-1109868 1932_na     643_aa hypothetical protein
1031 AE000520.1 GCA_000008605.1_01031 CDS open 1109926-1111440 1515_na     504_aa rny Ribonuclease Y
1032 AE000520.1 GCA_000008605.1_01032 CDS open 1111462-1111905 444_na     147_aa hypothetical protein
1033 AE000520.1 GCA_000008605.1_01033 CDS open 1111906-1113426 1521_na     506_aa gatA Glutamyl-tRNA(Gln) amidotransferase subunit A
1034 AE000520.1 GCA_000008605.1_01034 CDS open 1113419-1114948 1530_na     509_aa gatB Aspartylglutamyl-tRNA(AsnGln) amidotransferase subunit B
1035 AE000520.1 GCA_000008605.1_01035 CDS open 1115044-1116411 1368_na     455_aa radA DNA repair protein RadA
1036 AE000520.1 GCA_000008605.1_01036 CDS open 1116458-1117126 669_na     222_aa recX Regulatory protein RecX
1037 AE000520.1 GCA_000008605.1_01037 CDS open 1117080-1117469 390_na     129_aa rpsI 30S ribosomal protein S9
1038 AE000520.1 GCA_000008605.1_01038 CDS open 1117485-1117913 429_na     142_aa rplM 50S ribosomal protein L13
1039 AE000520.1 GCA_000008605.1_01039 CDS open 1117910-1118152 243_na     80_aa hypothetical protein
1040 AE000520.1 GCA_000008605.1_01040 CDS open 1118346-1120115 1770_na     589_aa hypothetical protein
1041 AE000520.1 GCA_000008605.1_01041 CDS open 1120138-1121013 876_na     291_aa udp Uridine phosphorylase
1042 AE000520.1 GCA_000008605.1_01042 CDS open 1121029-1123086 2058_na     685_aa pcrA_2 ATP-dependent DNA helicase PcrA
1043 AE000520.1 GCA_000008605.1_01043 CDS open 1123124-1123810 687_na     228_aa deaD_2 ATP-dependent RNA helicase DeaD
1044 AE000520.1 GCA_000008605.1_01044 CDS open 1123851-1124192 342_na     113_aa hypothetical protein
1045 AE000520.1 GCA_000008605.1_01045 CDS open 1124243-1125898 1656_na     551_aa hypothetical protein
1046 AE000520.1 GCA_000008605.1_01046 CDS open 1125966-1126400 435_na     144_aa hypothetical protein
1047 AE000520.1 GCA_000008605.1_01047 CDS open 1126412-1127347 936_na     311_aa hypothetical protein
1048 AE000520.1 GCA_000008605.1_01048 CDS open 1127421-1128446 1026_na     341_aa yrbG Inner membrane protein YrbG
1049 AE000520.1 GCA_000008605.1_01049 CDS open 1128443-1131397 2955_na     984_aa valS Valine--tRNA ligase
1050 AE000520.1 GCA_000008605.1_01050 CDS open 1131466-1133844 2379_na     792_aa actP Copper-transporting P-type ATPase
1051 AE000520.1 GCA_000008605.1_01051 CDS open 1133934-1134650 717_na     238_aa hypothetical protein
1052 AE000520.1 GCA_000008605.1_01052 CDS open 1134809-1135342 534_na     177_aa tpf1 Antigen TpF1
1053 AE000520.1 GCA_000008605.1_01053 CDS open 1135569-1136141 573_na     190_aa apt Adenine phosphoribosyltransferase
1054 AE000520.1 GCA_000008605.1_01054 CDS open 1136164-1137219 1056_na     351_aa epmA Elongation factor P--(R)-beta-lysine ligase
1055 AE000520.1 GCA_000008605.1_01055 CDS open 1137219-1137818 600_na     199_aa clpP_2 ATP-dependent Clp protease proteolytic subunit