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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_000025085.1)

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PROKKA Annotations for GCA_000025085.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
1 2658366 2471 19 1 61
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Annotation Table [page:6]    |    Number of Records Found: 2638 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP001837.1 tRNA open 2514699-2514791 tRNA-Ser(tga)
2502 CP001837.1 GCA_000025085.1_02502 CDS open 2514839-2516314 1476_na     491_aa gltB Glutamate synthase [NADPH] small chain
2503 CP001837.1 GCA_000025085.1_02503 CDS open 2516332-2520828 4497_na     1498_aa gltA Glutamate synthase [NADPH] large chain
2504 CP001837.1 GCA_000025085.1_02504 CDS open 2520972-2521856 885_na     294_aa hdfR HTH-type transcriptional regulator HdfR
2505 CP001837.1 GCA_000025085.1_02505 CDS open 2521952-2523067 1116_na     371_aa hypothetical protein
2506 CP001837.1 GCA_000025085.1_02506 CDS open 2523064-2523846 783_na     260_aa hypothetical protein
2507 CP001837.1 GCA_000025085.1_02507 CDS open 2524179-2524565 387_na     128_aa hypothetical protein
2508 CP001837.1 GCA_000025085.1_02508 CDS open 2524694-2524963 270_na     89_aa hypothetical protein
2509 CP001837.1 GCA_000025085.1_02509 CDS open 2525169-2526140 972_na     323_aa sle1 N-acetylmuramoyl-L-alanine amidase sle1
2510 CP001837.1 misc_RNA open 2526545-2526780 S35
2511 CP001837.1 GCA_000025085.1_02511 CDS open 2527062-2527901 840_na     279_aa metQ_3 putative D-methionine-binding lipoprotein MetQ
2512 CP001837.1 GCA_000025085.1_02512 CDS open 2527933-2528592 660_na     219_aa metP_2 Methionine import system permease protein MetP
2513 CP001837.1 GCA_000025085.1_02513 CDS open 2528595-2529617 1023_na     340_aa metN Methionine import ATP-binding protein MetN
2514 CP001837.1 GCA_000025085.1_02514 CDS open 2529822-2531564 1743_na     580_aa Putative multidrug export ATP-bindingpermease protein
2515 CP001837.1 GCA_000025085.1_02515 CDS open 2531561-2533342 1782_na     593_aa irtA_2 Iron import ATP-bindingpermease protein IrtA
2516 CP001837.1 GCA_000025085.1_02516 CDS open 2533626-2534771 1146_na     381_aa mccB Cystathionine gamma-lyase
2517 CP001837.1 GCA_000025085.1_02517 CDS open 2534778-2535722 945_na     314_aa mccA O-acetylserine dependent cystathionine beta-synthase
2518 CP001837.1 GCA_000025085.1_02518 CDS open 2536053-2536493 441_na     146_aa hypothetical protein
2519 CP001837.1 GCA_000025085.1_02519 CDS open 2536600-2537931 1332_na     443_aa hypothetical protein
2520 CP001837.1 GCA_000025085.1_02520 CDS open 2538073-2538327 255_na     84_aa hypothetical protein
2521 CP001837.1 GCA_000025085.1_02521 CDS open 2538357-2539085 729_na     242_aa est_2 Carboxylesterase
2522 CP001837.1 GCA_000025085.1_02522 CDS open 2539126-2539794 669_na     222_aa hypothetical protein
2523 CP001837.1 GCA_000025085.1_02523 CDS open 2539977-2540339 363_na     120_aa hypothetical protein
2524 CP001837.1 GCA_000025085.1_02524 CDS open 2540460-2543030 2571_na     856_aa hypothetical protein
2525 CP001837.1 GCA_000025085.1_02525 CDS open 2543045-2544544 1500_na     499_aa hypothetical protein
2526 CP001837.1 GCA_000025085.1_02526 CDS open 2545275-2545541 267_na     88_aa hypothetical protein
2527 CP001837.1 GCA_000025085.1_02527 CDS open 2545600-2546793 1194_na     397_aa yciC Putative metal chaperone YciC
2528 CP001837.1 GCA_000025085.1_02528 CDS open 2546889-2547707 819_na     272_aa attM N-acyl homoserine lactonase AttM
2529 CP001837.1 GCA_000025085.1_02529 CDS open 2547725-2548150 426_na     141_aa hypothetical protein
2530 CP001837.1 GCA_000025085.1_02530 CDS open 2548256-2549122 867_na     288_aa hypothetical protein
2531 CP001837.1 GCA_000025085.1_02531 CDS open 2549339-2550880 1542_na     513_aa guaA GMP synthase [glutamine-hydrolyzing]
2532 CP001837.1 GCA_000025085.1_02532 CDS open 2551009-2552475 1467_na     488_aa guaB Inosine-5-monophosphate dehydrogenase
2533 CP001837.1 GCA_000025085.1_02533 CDS open 2552512-2553780 1269_na     422_aa pucK Uric acid permease PucK
2534 CP001837.1 GCA_000025085.1_02534 CDS open 2553777-2554358 582_na     193_aa xpt Xanthine phosphoribosyltransferase
2535 CP001837.1 misc_RNA open 2554573-2554675 Purine
2536 CP001837.1 GCA_000025085.1_02536 CDS open 2554892-2555299 408_na     135_aa hypothetical protein
2537 CP001837.1 GCA_000025085.1_02537 CDS open 2555445-2556116 672_na     223_aa hypothetical protein
2538 CP001837.1 GCA_000025085.1_02538 CDS open 2556233-2557255 1023_na     340_aa putative protein
2539 CP001837.1 GCA_000025085.1_02539 CDS open 2557875-2559263 1389_na     462_aa tcyP L-cystine uptake protein TcyP
2540 CP001837.1 GCA_000025085.1_02540 CDS open 2559447-2560202 756_na     251_aa nfrA NADPH-dependent oxidoreductase
2541 CP001837.1 GCA_000025085.1_02541 CDS open 2560368-2561147 780_na     259_aa mhpD 2-keto-4-pentenoate hydratase
2542 CP001837.1 GCA_000025085.1_02542 CDS open 2561674-2562243 570_na     189_aa ahpC Alkyl hydroperoxide reductase C
2543 CP001837.1 GCA_000025085.1_02543 CDS open 2562261-2563784 1524_na     507_aa ahpF Alkyl hydroperoxide reductase subunit F
2544 CP001837.1 GCA_000025085.1_02544 CDS open 2564200-2564823 624_na     207_aa hypothetical protein
2545 CP001837.1 GCA_000025085.1_02545 CDS open 2565030-2565281 252_na     83_aa hypothetical protein
2546 CP001837.1 GCA_000025085.1_02546 CDS open 2565506-2566084 579_na     192_aa gpmA_2 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
2547 CP001837.1 GCA_000025085.1_02547 CDS open 2566554-2566802 249_na     82_aa hypothetical protein
2548 CP001837.1 GCA_000025085.1_02548 CDS open 2566954-2567184 231_na     76_aa hypothetical protein
2549 CP001837.1 GCA_000025085.1_02549 CDS open 2567422-2567679 258_na     85_aa hypothetical protein
2550 CP001837.1 GCA_000025085.1_02550 CDS open 2568162-2568326 165_na     54_aa hypothetical protein
2551 CP001837.1 GCA_000025085.1_02551 CDS open 2568668-2568865 198_na     65_aa hypothetical protein
2552 CP001837.1 GCA_000025085.1_02552 CDS open 2569148-2569354 207_na     68_aa hypothetical protein
2553 CP001837.1 GCA_000025085.1_02553 CDS open 2569785-2570033 249_na     82_aa hypothetical protein
2554 CP001837.1 GCA_000025085.1_02554 CDS open 2570732-2570974 243_na     80_aa rpsR 30S ribosomal protein S18
2555 CP001837.1 GCA_000025085.1_02555 CDS open 2571021-2571530 510_na     169_aa ssbA_2 Single-stranded DNA-binding protein A
2556 CP001837.1 GCA_000025085.1_02556 CDS open 2571552-2571848 297_na     98_aa rpsF 30S ribosomal protein S6
2557 CP001837.1 GCA_000025085.1_02557 CDS open 2572166-2572951 786_na     261_aa hypothetical protein
2558 CP001837.1 GCA_000025085.1_02558 CDS open 2573013-2573204 192_na     63_aa hypothetical protein
2559 CP001837.1 GCA_000025085.1_02559 CDS open 2573444-2574541 1098_na     365_aa ychF Ribosome-binding ATPase YchF
2560 CP001837.1 GCA_000025085.1_02560 CDS open 2574541-2574756 216_na     71_aa hypothetical protein
2561 CP001837.1 GCA_000025085.1_02561 CDS open 2574774-2575655 882_na     293_aa mscS Small-conductance mechanosensitive channel
2562 CP001837.1 GCA_000025085.1_02562 CDS open 2575864-2576691 828_na     275_aa spo0J Stage 0 sporulation protein J
2563 CP001837.1 misc_RNA open 2576964-2577356 T-box
2564 CP001837.1 GCA_000025085.1_02564 CDS open 2577425-2578519 1095_na     364_aa metI Cystathionine gamma-synthaseO-acetylhomoserine (thiol)-lyase
2565 CP001837.1 GCA_000025085.1_02565 CDS open 2578524-2579699 1176_na     391_aa metC Cystathionine beta-lyase MetC
2566 CP001837.1 GCA_000025085.1_02566 CDS open 2579653-2581491 1839_na     612_aa yitJ Bifunctional homocysteine S-methyltransferase5%2C10-methylenetetrahydrofolate reductase
2567 CP001837.1 GCA_000025085.1_02567 CDS open 2581488-2583716 2229_na     742_aa metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
2568 CP001837.1 GCA_000025085.1_02568 CDS open 2583941-2584684 744_na     247_aa Isatin hydrolase
2569 CP001837.1 GCA_000025085.1_02569 CDS open 2584909-2586024 1116_na     371_aa Putative flavoprotein monooxygenase
2570 CP001837.1 GCA_000025085.1_02570 CDS open 2586018-2587367 1350_na     449_aa hypothetical protein
2571 CP001837.1 GCA_000025085.1_02571 CDS open 2587383-2588270 888_na     295_aa hypothetical protein
2572 CP001837.1 GCA_000025085.1_02572 CDS open 2588342-2589538 1197_na     398_aa macB Macrolide export ATP-bindingpermease protein MacB
2573 CP001837.1 GCA_000025085.1_02573 CDS open 2589522-2590217 696_na     231_aa yknY putative ABC transporter ATP-binding protein YknY
2574 CP001837.1 GCA_000025085.1_02574 CDS open 2590214-2591335 1122_na     373_aa hypothetical protein
2575 CP001837.1 GCA_000025085.1_02575 CDS open 2591503-2591919 417_na     138_aa hypothetical protein
2576 CP001837.1 GCA_000025085.1_02576 CDS open 2592166-2592414 249_na     82_aa hypothetical protein
2577 CP001837.1 GCA_000025085.1_02577 CDS open 2592451-2593353 903_na     300_aa sasA_3 Adaptive-response sensory-kinase SasA
2578 CP001837.1 GCA_000025085.1_02578 CDS open 2593376-2594125 750_na     249_aa hypothetical protein
2579 CP001837.1 GCA_000025085.1_02579 CDS open 2594118-2595032 915_na     304_aa bcrA_4 Bacitracin transport ATP-binding protein BcrA
2580 CP001837.1 GCA_000025085.1_02580 CDS open 2595123-2595794 672_na     223_aa arlR_3 Response regulator ArlR
2581 CP001837.1 GCA_000025085.1_02581 CDS open 2596073-2597350 1278_na     425_aa cscB Sucrose permease
2582 CP001837.1 GCA_000025085.1_02582 CDS open 2597371-2598786 1416_na     471_aa sacA Sucrose-6-phosphate hydrolase
2583 CP001837.1 GCA_000025085.1_02583 CDS open 2598966-2599943 978_na     325_aa purR_3 HTH-type transcriptional repressor PurR
2584 CP001837.1 GCA_000025085.1_02584 CDS open 2600130-2600534 405_na     134_aa hypothetical protein
2585 CP001837.1 GCA_000025085.1_02585 CDS open 2600831-2601709 879_na     292_aa ywqG putative protein YwqG
2586 CP001837.1 GCA_000025085.1_02586 CDS open 2601954-2602517 564_na     187_aa ydaF Putative ribosomal N-acetyltransferase YdaF
2587 CP001837.1 GCA_000025085.1_02587 CDS open 2602557-2602649 93_na     30_aa hypothetical protein
2588 CP001837.1 GCA_000025085.1_02588 CDS open 2602862-2604217 1356_na     451_aa glpT Glycerol-3-phosphate transporter
2589 CP001837.1 GCA_000025085.1_02589 CDS open 2604429-2605853 1425_na     474_aa hypothetical protein
2590 CP001837.1 GCA_000025085.1_02590 CDS open 2605981-2606559 579_na     192_aa spsB_3 Signal peptidase IB
2591 CP001837.1 GCA_000025085.1_02591 CDS open 2606844-2607602 759_na     252_aa bceA_2 Bacitracin export ATP-binding protein BceA
2592 CP001837.1 GCA_000025085.1_02592 CDS open 2607592-2609478 1887_na     628_aa bceB_3 Bacitracin export permease protein BceB
2593 CP001837.1 GCA_000025085.1_02593 CDS open 2609503-2609700 198_na     65_aa hypothetical protein
2594 CP001837.1 GCA_000025085.1_02594 CDS open 2609765-2610337 573_na     190_aa hypothetical protein
2595 CP001837.1 GCA_000025085.1_02595 CDS open 2610740-2611645 906_na     301_aa htxB putative phosphite transport system-binding protein HtxB
2596 CP001837.1 GCA_000025085.1_02596 CDS open 2611897-2612679 783_na     260_aa golD NAD-dependent glycerol dehydrogenase
2597 CP001837.1 GCA_000025085.1_02597 CDS open 2612683-2613978 1296_na     431_aa csbX Alpha-ketoglutarate permease
2598 CP001837.1 GCA_000025085.1_02598 CDS open 2614014-2615615 1602_na     533_aa xylB_3 Xylulose kinase
2599 CP001837.1 GCA_000025085.1_02599 CDS open 2616045-2617124 1080_na     359_aa gutB Sorbitol dehydrogenase
2600 CP001837.1 GCA_000025085.1_02600 CDS open 2617427-2617972 546_na     181_aa hypothetical protein
2601 CP001837.1 GCA_000025085.1_02601 CDS open 2617938-2618333 396_na     131_aa hypothetical protein
2602 CP001837.1 GCA_000025085.1_02602 CDS open 2618353-2618706 354_na     117_aa hypothetical protein
2603 CP001837.1 GCA_000025085.1_02603 CDS open 2619152-2619991 840_na     279_aa noc Nucleoid occlusion protein
2604 CP001837.1 GCA_000025085.1_02604 CDS open 2620034-2620756 723_na     240_aa rsmG Ribosomal RNA small subunit methyltransferase G
2605 CP001837.1 GCA_000025085.1_02605 CDS open 2620753-2622633 1881_na     626_aa mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
2606 CP001837.1 GCA_000025085.1_02606 CDS open 2622686-2624065 1380_na     459_aa mnmE tRNA modification GTPase MnmE
2607 CP001837.1 GCA_000025085.1_02607 CDS open 2624215-2624556 342_na     113_aa rnpA Ribonuclease P protein component
2608 CP001837.1 GCA_000025085.1_02608 CDS open 2624642-2624779 138_na     45_aa rpmH 50S ribosomal protein L34
2609 CP001837.1 GCA_000025085.1_02609 CDS open 2625430-2626797 1368_na     455_aa dnaA Chromosomal replication initiator protein DnaA
2610 CP001837.1 GCA_000025085.1_02610 CDS open 2627084-2628217 1134_na     377_aa dnaN Beta sliding clamp
2611 CP001837.1 GCA_000025085.1_02611 CDS open 2628578-2628811 234_na     77_aa hypothetical protein
2612 CP001837.1 GCA_000025085.1_02612 CDS open 2628808-2629923 1116_na     371_aa recF DNA replication and repair protein RecF
2613 CP001837.1 GCA_000025085.1_02613 CDS open 2629933-2631867 1935_na     644_aa gyrB DNA gyrase subunit B
2614 CP001837.1 GCA_000025085.1_02614 CDS open 2631904-2634588 2685_na     894_aa gyrA DNA gyrase subunit A
2615 CP001837.1 GCA_000025085.1_02615 CDS open 2634745-2635563 819_na     272_aa nnrD ADP-dependent (S)-NAD(P)H-hydrate dehydratase
2616 CP001837.1 GCA_000025085.1_02616 CDS open 2636085-2637368 1284_na     427_aa serS Serine--tRNA ligase
2617 CP001837.1 GCA_000025085.1_02617 CDS open 2637662-2638357 696_na     231_aa hypothetical protein
2618 CP001837.1 GCA_000025085.1_02618 CDS open 2638354-2638683 330_na     109_aa hypothetical protein
2619 CP001837.1 misc_RNA open 2638766-2638864 SAM
2620 CP001837.1 GCA_000025085.1_02620 CDS open 2638931-2639899 969_na     322_aa metXA Homoserine O-acetyltransferase
2621 CP001837.1 GCA_000025085.1_02621 CDS open 2640073-2641002 930_na     309_aa hypothetical protein
2622 CP001837.1 GCA_000025085.1_02622 CDS open 2641024-2642991 1968_na     655_aa gdpP Cyclic-di-AMP phosphodiesterase GdpP
2623 CP001837.1 GCA_000025085.1_02623 CDS open 2642988-2643434 447_na     148_aa rplI 50S ribosomal protein L9
2624 CP001837.1 GCA_000025085.1_02624 CDS open 2643504-2644901 1398_na     465_aa dnaC Replicative DNA helicase
2625 CP001837.1 GCA_000025085.1_02625 CDS open 2645187-2646470 1284_na     427_aa purA Adenylosuccinate synthetase
2626 CP001837.1 tRNA open 2646824-2646898 tRNA-Glu(ttc)
2627 CP001837.1 tRNA open 2646907-2646979 tRNA-Asp(gtc)
2628 CP001837.1 GCA_000025085.1_02628 CDS open 2647433-2648134 702_na     233_aa walR Transcriptional regulatory protein WalR
2629 CP001837.1 GCA_000025085.1_02629 CDS open 2648147-2649970 1824_na     607_aa walK Sensor protein kinase WalK
2630 CP001837.1 GCA_000025085.1_02630 CDS open 2649951-2651294 1344_na     447_aa yycH Two-component system WalRWalK regulatory protein YycH
2631 CP001837.1 GCA_000025085.1_02631 CDS open 2651295-2652086 792_na     263_aa hypothetical protein
2632 CP001837.1 GCA_000025085.1_02632 CDS open 2652257-2653330 1074_na     357_aa icaC putative poly-beta-1%2C6-N-acetyl-D-glucosamine export protein
2633 CP001837.1 GCA_000025085.1_02633 CDS open 2653320-2654183 864_na     287_aa icaB Poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase
2634 CP001837.1 GCA_000025085.1_02634 CDS open 2654167-2654493 327_na     108_aa icaD Poly-beta-1%2C6-N-acetyl-D-glucosamine synthesis protein IcaD
2635 CP001837.1 GCA_000025085.1_02635 CDS open 2654463-2655686 1224_na     407_aa icaA Poly-beta-1%2C6-N-acetyl-D-glucosamine synthase
2636 CP001837.1 GCA_000025085.1_02636 CDS open 2655938-2656540 603_na     200_aa hypothetical protein
2637 CP001837.1 GCA_000025085.1_02637 CDS open 2656565-2656972 408_na     135_aa hypothetical protein
2638 CP001837.1 GCA_000025085.1_02638 CDS open 2657575-2658366 792_na     263_aa yycJ Putative metallo-hydrolase YycJ