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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Megasphaera lornae (GCA_000146855.1)

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PROKKA Annotations for GCA_000146855.1
Genome Selected: Megasphaera lornae
ContigsBases CDSrRNA tmRNAtRNA
14 2511030 2089 4 1 42
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Annotation Table [page:5]    |    Number of Records Found: 2158 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 GL405246.1 GCA_000146855.1_02001 CDS open 2319743-2320615 873_na     290_aa cas1_2 CRISPR-associated endonuclease Cas1
2002 GL405246.1 GCA_000146855.1_02002 CDS open 2320612-2324787 4176_na     1391_aa cas9 CRISPR-associated endonuclease Cas9
2003 GL405246.1 misc_RNA open 2325510-2325707 6S
2004 GL405246.1 GCA_000146855.1_02004 CDS open 2325876-2326892 1017_na     338_aa ccpA Catabolite control protein A
2005 GL405246.1 GCA_000146855.1_02005 CDS open 2327241-2327531 291_na     96_aa hypothetical protein
2006 GL405246.1 GCA_000146855.1_02006 CDS open 2327796-2328416 621_na     206_aa udk_2 Uridine kinase
2007 GL405246.1 GCA_000146855.1_02007 CDS open 2328435-2329184 750_na     249_aa gatD Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD
2008 GL405246.1 GCA_000146855.1_02008 CDS open 2329574-2330899 1326_na     441_aa murT Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT
2009 GL405246.1 GCA_000146855.1_02009 CDS open 2331011-2332549 1539_na     512_aa rny Ribonuclease Y
2010 GL405246.1 GCA_000146855.1_02010 CDS open 2332974-2333312 339_na     112_aa hypothetical protein
2011 GL405246.1 GCA_000146855.1_02011 CDS open 2333766-2336312 2547_na     848_aa lon1 Lon protease 1
2012 GL405246.1 GCA_000146855.1_02012 CDS open 2336354-2336968 615_na     204_aa hypothetical protein
2013 GL405246.1 GCA_000146855.1_02013 CDS open 2337777-2339147 1371_na     456_aa ykoD_4 Putative HMPthiamine import ATP-binding protein YkoD
2014 GL405246.1 GCA_000146855.1_02014 CDS open 2339141-2339833 693_na     230_aa ecfT_3 Energy-coupling factor transporter transmembrane protein EcfT
2015 GL405246.1 GCA_000146855.1_02015 CDS open 2339830-2340420 591_na     196_aa hypothetical protein
2016 GL405246.1 GCA_000146855.1_02016 CDS open 2340535-2342259 1725_na     574_aa putative ABC transporter ATP-binding protein
2017 GL405246.1 GCA_000146855.1_02017 CDS open 2342263-2344020 1758_na     585_aa Putative multidrug export ATP-bindingpermease protein
2018 GL405246.1 GCA_000146855.1_02018 CDS open 2344245-2345207 963_na     320_aa rhaR_2 HTH-type transcriptional activator RhaR
2019 GL405246.1 GCA_000146855.1_02019 CDS open 2345429-2347090 1662_na     553_aa ilvD Dihydroxy-acid dehydratase
2020 GL405246.1 GCA_000146855.1_02020 CDS open 2347467-2348270 804_na     267_aa hypothetical protein
2021 GL405246.1 GCA_000146855.1_02021 CDS open 2348754-2349974 1221_na     406_aa hypothetical protein
2022 GL405246.1 GCA_000146855.1_02022 CDS open 2350631-2351224 594_na     197_aa hypothetical protein
2023 GL405246.1 GCA_000146855.1_02023 CDS open 2351378-2351524 147_na     48_aa hypothetical protein
2024 GL405246.1 GCA_000146855.1_02024 CDS open 2351900-2352154 255_na     84_aa hypothetical protein
2025 GL405246.1 GCA_000146855.1_02025 CDS open 2352170-2352376 207_na     68_aa hypothetical protein
2026 GL405246.1 GCA_000146855.1_02026 CDS open 2352675-2353778 1104_na     367_aa hypothetical protein
2027 GL405246.1 GCA_000146855.1_02027 CDS open 2354193-2355374 1182_na     393_aa csd_3 putative cysteine desulfurase
2028 GL405246.1 GCA_000146855.1_02028 CDS open 2355523-2356038 516_na     171_aa wecD dTDP-fucosamine acetyltransferase
2029 GL405246.1 GCA_000146855.1_02029 CDS open 2357198-2357530 333_na     110_aa hypothetical protein
2030 GL405246.1 GCA_000146855.1_02030 CDS open 2357644-2358087 444_na     147_aa gcdC Glutaconyl-CoA decarboxylase subunit gamma
2031 GL405246.1 GCA_000146855.1_02031 CDS open 2358099-2359265 1167_na     388_aa gcdB Glutaconyl-CoA decarboxylase subunit beta
2032 GL405246.1 GCA_000146855.1_02032 CDS open 2359642-2360592 951_na     316_aa gctA Glutaconate CoA-transferase subunit A
2033 GL405246.1 GCA_000146855.1_02033 CDS open 2360606-2361403 798_na     265_aa gctB Glutaconate CoA-transferase subunit B
2034 GL405246.1 GCA_000146855.1_02034 CDS open 2361468-2363228 1761_na     586_aa gcdA Glutaconyl-CoA decarboxylase subunit alpha
2035 GL405246.1 GCA_000146855.1_02035 CDS open 2363285-2363599 315_na     104_aa hypothetical protein
2036 GL405246.1 GCA_000146855.1_02036 CDS open 2364264-2365478 1215_na     404_aa gltS_3 Sodiumglutamate symporter
2037 GL405246.1 GCA_000146855.1_02037 CDS open 2366051-2366578 528_na     175_aa hypothetical protein
2038 GL405246.1 GCA_000146855.1_02038 CDS open 2366580-2367314 735_na     244_aa fabG_2 3-oxoacyl-[acyl-carrier-protein] reductase FabG
2039 GL405246.1 GCA_000146855.1_02039 CDS open 2367411-2368688 1278_na     425_aa serS Serine--tRNA ligase
2040 GL405246.1 GCA_000146855.1_02040 CDS open 2369016-2369435 420_na     139_aa cdd Cytidine deaminase
2041 GL405246.1 GCA_000146855.1_02041 CDS open 2369779-2371101 1323_na     440_aa pdp Pyrimidine-nucleoside phosphorylase
2042 GL405246.1 GCA_000146855.1_02042 CDS open 2371289-2372050 762_na     253_aa hypothetical protein
2043 GL405246.1 GCA_000146855.1_02043 CDS open 2372162-2373514 1353_na     450_aa hypothetical protein
2044 GL405246.1 GCA_000146855.1_02044 CDS open 2373730-2375028 1299_na     432_aa mepA_6 Multidrug export protein MepA
2045 GL405246.1 GCA_000146855.1_02045 CDS open 2375060-2375656 597_na     198_aa hypothetical protein
2046 GL405246.1 GCA_000146855.1_02046 CDS open 2376109-2376969 861_na     286_aa metQ_2 Methionine-binding lipoprotein MetQ
2047 GL405246.1 GCA_000146855.1_02047 CDS open 2377079-2377669 591_na     196_aa hypothetical protein
2048 GL405246.1 GCA_000146855.1_02048 CDS open 2377845-2379719 1875_na     624_aa yxdM ABC transporter permease protein YxdM
2049 GL405246.1 GCA_000146855.1_02049 CDS open 2379706-2380461 756_na     251_aa yxdL ABC transporter ATP-binding protein YxdL
2050 GL405246.1 GCA_000146855.1_02050 CDS open 2380727-2381716 990_na     329_aa sasA_4 Adaptive-response sensory-kinase SasA
2051 GL405246.1 GCA_000146855.1_02051 CDS open 2381706-2382392 687_na     228_aa graR Response regulator protein GraR
2052 GL405246.1 GCA_000146855.1_02052 CDS open 2382739-2383626 888_na     295_aa nanA N-acetylneuraminate lyase
2053 GL405246.1 GCA_000146855.1_02053 CDS open 2383744-2384430 687_na     228_aa nanE Putative N-acetylmannosamine-6-phosphate 2-epimerase
2054 GL405246.1 GCA_000146855.1_02054 CDS open 2384439-2384885 447_na     148_aa putative protein
2055 GL405246.1 GCA_000146855.1_02055 CDS open 2384899-2385429 531_na     176_aa hypothetical protein
2056 GL405246.1 GCA_000146855.1_02056 CDS open 2385734-2386723 990_na     329_aa oppF_4 Oligopeptide transport ATP-binding protein OppF
2057 GL405246.1 GCA_000146855.1_02057 CDS open 2386713-2387726 1014_na     337_aa oppD_4 Oligopeptide transport ATP-binding protein OppD
2058 GL405246.1 GCA_000146855.1_02058 CDS open 2387739-2388614 876_na     291_aa oppC_2 Oligopeptide transport system permease protein OppC
2059 GL405246.1 GCA_000146855.1_02059 CDS open 2388623-2389579 957_na     318_aa gsiC_2 Glutathione transport system permease protein GsiC
2060 GL405246.1 GCA_000146855.1_02060 CDS open 2389648-2391309 1662_na     553_aa hypothetical protein
2061 GL405246.1 GCA_000146855.1_02061 CDS open 2391715-2392215 501_na     166_aa moaA2 GTP 3%2C8-cyclase 2
2062 GL405246.1 GCA_000146855.1_02062 CDS open 2392251-2392688 438_na     145_aa moaA GTP 3%2C8-cyclase
2063 GL405246.1 GCA_000146855.1_02063 CDS open 2392691-2393170 480_na     159_aa moaC Cyclic pyranopterin monophosphate synthase
2064 GL405246.1 GCA_000146855.1_02064 CDS open 2393344-2394711 1368_na     455_aa yqiK Inner membrane protein YqiK
2065 GL405246.1 GCA_000146855.1_02065 CDS open 2395152-2398172 3021_na     1006_aa hypothetical protein
2066 GL405246.1 GCA_000146855.1_02066 CDS open 2398614-2399060 447_na     148_aa hypothetical protein
2067 GL405246.1 GCA_000146855.1_02067 CDS open 2399385-2400659 1275_na     424_aa sstT Serinethreonine transporter SstT
2068 GL405246.1 GCA_000146855.1_02068 CDS open 2401180-2401719 540_na     179_aa hypothetical protein
2069 GL405246.1 GCA_000146855.1_02069 CDS open 2401790-2402212 423_na     140_aa Flavodoxin
2070 GL405246.1 GCA_000146855.1_02070 CDS open 2402473-2404074 1602_na     533_aa hypothetical protein
2071 GL405246.1 GCA_000146855.1_02071 CDS open 2404376-2405215 840_na     279_aa yqfL Putative pyruvate%2C phosphate dikinase regulatory protein
2072 GL405246.1 GCA_000146855.1_02072 CDS open 2405288-2407912 2625_na     874_aa ppdK Pyruvate%2C phosphate dikinase
2073 GL405246.1 GCA_000146855.1_02073 CDS open 2408333-2408569 237_na     78_aa hypothetical protein
2074 GL405246.1 GCA_000146855.1_02074 CDS open 2408870-2410027 1158_na     385_aa hypothetical protein
2075 GL405246.1 GCA_000146855.1_02075 CDS open 2410146-2410655 510_na     169_aa hypothetical protein
2076 GL405246.1 GCA_000146855.1_02076 CDS open 2410744-2411346 603_na     200_aa Protein adenylyltransferase NmFic
2077 GL405246.1 GCA_000146855.1_02077 CDS open 2412225-2412548 324_na     107_aa hypothetical protein
2078 GL405246.1 GCA_000146855.1_02078 CDS open 2412564-2414630 2067_na     688_aa hypothetical protein
2079 GL405246.1 GCA_000146855.1_02079 CDS open 2414623-2415114 492_na     163_aa ntpK V-type sodium ATPase subunit K
2080 GL405246.1 GCA_000146855.1_02080 CDS open 2415146-2415742 597_na     198_aa atpE_2 V-type proton ATPase subunit E
2081 GL405246.1 GCA_000146855.1_02081 CDS open 2415754-2416719 966_na     321_aa ntpC V-type sodium ATPase subunit C
2082 GL405246.1 GCA_000146855.1_02082 CDS open 2416712-2417032 321_na     106_aa ntpG V-type sodium ATPase subunit G
2083 GL405246.1 GCA_000146855.1_02083 CDS open 2417055-2418824 1770_na     589_aa ntpA V-type sodium ATPase catalytic subunit A
2084 GL405246.1 GCA_000146855.1_02084 CDS open 2418824-2420203 1380_na     459_aa ntpB_2 V-type sodium ATPase subunit B
2085 GL405246.1 GCA_000146855.1_02085 CDS open 2420663-2421322 660_na     219_aa ntpD V-type sodium ATPase subunit D
2086 GL405246.1 GCA_000146855.1_02086 CDS open 2421408-2423516 2109_na     702_aa hypothetical protein
2087 GL405246.1 GCA_000146855.1_02087 CDS open 2423989-2426037 2049_na     682_aa hypothetical protein
2088 GL405246.1 GCA_000146855.1_02088 CDS open 2426395-2428482 2088_na     695_aa hypothetical protein
2089 GL405246.1 GCA_000146855.1_02089 CDS open 2428715-2429287 573_na     190_aa hypothetical protein
2090 GL405246.1 GCA_000146855.1_02090 CDS open 2429256-2429687 432_na     143_aa hypothetical protein
2091 GL405246.1 GCA_000146855.1_02091 CDS open 2429698-2430228 531_na     176_aa hypothetical protein
2092 GL405246.1 GCA_000146855.1_02092 CDS open 2430574-2431020 447_na     148_aa rimI [Ribosomal protein S18]-alanine N-acetyltransferase
2093 GL405246.1 GCA_000146855.1_02093 CDS open 2431909-2433036 1128_na     375_aa hypothetical protein
2094 GL405246.1 GCA_000146855.1_02094 CDS open 2433512-2435281 1770_na     589_aa hypothetical protein
2095 GL405246.1 GCA_000146855.1_02095 CDS open 2435294-2437333 2040_na     679_aa hypothetical protein
2096 GL405246.1 GCA_000146855.1_02096 CDS open 2437426-2437989 564_na     187_aa hypothetical protein
2097 GL405246.1 GCA_000146855.1_02097 CDS open 2438036-2438587 552_na     183_aa hypothetical protein
2098 GL405246.1 GCA_000146855.1_02098 CDS open 2439375-2440592 1218_na     405_aa sbcD Nuclease SbcCD subunit D
2099 GL405246.1 GCA_000146855.1_02099 CDS open 2441259-2442077 819_na     272_aa hypothetical protein
2100 GL405246.1 GCA_000146855.1_02100 CDS open 2442287-2443498 1212_na     403_aa fprA Nitric oxide reductase
2101 GL405246.1 GCA_000146855.1_02101 CDS open 2443622-2444155 534_na     177_aa bcrC Undecaprenyl-diphosphatase BcrC
2102 GL405246.1 GCA_000146855.1_02102 CDS open 2444176-2445456 1281_na     426_aa hisS Histidine--tRNA ligase
2103 GL405246.1 GCA_000146855.1_02103 CDS open 2445453-2446886 1434_na     477_aa hypothetical protein
2104 GL405246.1 GCA_000146855.1_02104 CDS open 2446886-2447512 627_na     208_aa gloC Hydroxyacylglutathione hydrolase GloC
2105 GL405246.1 GCA_000146855.1_02105 CDS open 2447864-2448526 663_na     220_aa hypothetical protein
2106 GL405246.1 GCA_000146855.1_02106 CDS open 2448570-2449352 783_na     260_aa yidC2 Membrane protein insertase YidC 2
2107 GL405246.1 GCA_000146855.1_02107 CDS open 2449629-2449955 327_na     108_aa rnpA Ribonuclease P protein component
2108 GL405246.1 GCA_000146855.1_02108 CDS open 2450293-2450430 138_na     45_aa rpmH 50S ribosomal protein L34
2109 GL405246.1 GCA_000146855.1_02109 CDS open 2451005-2452333 1329_na     442_aa dnaA_2 Chromosomal replication initiator protein DnaA
2110 GL405246.1 GCA_000146855.1_02110 CDS open 2452924-2454027 1104_na     367_aa dnaN Beta sliding clamp
2111 GL405246.1 GCA_000146855.1_02111 CDS open 2454030-2454551 522_na     173_aa yfcE Phosphodiesterase YfcE
2112 GL405246.1 GCA_000146855.1_02112 CDS open 2454696-2455202 507_na     168_aa IS1182 family transposase ISBpu1
2113 GL405246.1 GCA_000146855.1_02113 CDS open 2456246-2457271 1026_na     341_aa hypothetical protein
2114 GL405246.1 GCA_000146855.1_02114 CDS open 2457961-2458938 978_na     325_aa Int-Tn Transposase from transposon Tn916
2115 GL405246.1 GCA_000146855.1_02115 CDS open 2459100-2459279 180_na     59_aa hypothetical protein
2116 GL405246.1 misc_RNA open 2459370-2459467 pemK
2117 GL405246.1 GCA_000146855.1_02117 CDS open 2459963-2460376 414_na     137_aa hypothetical protein
2118 GL405246.1 GCA_000146855.1_02118 CDS open 2460801-2462330 1530_na     509_aa msbA_4 Lipid A export ATP-bindingpermease protein MsbA
2119 GL405246.1 GCA_000146855.1_02119 CDS open 2462692-2464572 1881_na     626_aa mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
2120 GL405246.1 GCA_000146855.1_02120 CDS open 2470895-2471797 903_na     300_aa hypothetical protein
2121 GL405246.1 GCA_000146855.1_02121 CDS open 2474742-2475428 687_na     228_aa gpmA_2 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
2122 GL405246.1 GCA_000146855.1_02122 CDS open 2476538-2477227 690_na     229_aa ywaC_2 GTP pyrophosphokinase YwaC
2123 GL405246.1 GCA_000146855.1_02123 CDS open 2477780-2478604 825_na     274_aa hypothetical protein
2124 GL405246.1 GCA_000146855.1_02124 CDS open 2479137-2481059 1923_na     640_aa gyrB DNA gyrase subunit B
2125 GL405246.1 GCA_000146855.1_02125 CDS open 2481371-2483809 2439_na     812_aa gyrA DNA gyrase subunit A
2126 GL405246.1 GCA_000146855.1_02126 CDS open 2484425-2484865 441_na     146_aa putative HTH-type transcriptional regulator
2127 GL405246.1 GCA_000146855.1_02127 CDS open 2484869-2485327 459_na     152_aa hypothetical protein
2128 GL405246.1 GCA_000146855.1_02128 CDS open 2485602-2485841 240_na     79_aa hypothetical protein
2129 GL405246.1 GCA_000146855.1_02129 CDS open 2486386-2486736 351_na     116_aa hypothetical protein
2130 GL405246.1 GCA_000146855.1_02130 CDS open 2486931-2487323 393_na     130_aa hypothetical protein
2131 GL405246.1 GCA_000146855.1_02131 CDS open 2487555-2487830 276_na     91_aa hypothetical protein
2132 GL405246.1 GCA_000146855.1_02132 CDS open 2487892-2488179 288_na     95_aa hypothetical protein
2133 GL405246.1 GCA_000146855.1_02133 CDS open 2488194-2488511 318_na     105_aa rsbV Anti-sigma-B factor antagonist
2134 GL405246.1 GCA_000146855.1_02134 CDS open 2488514-2488948 435_na     144_aa rsbW Serine-protein kinase RsbW
2135 GL405246.1 GCA_000146855.1_02135 CDS open 2488948-2489754 807_na     268_aa sigF RNA polymerase sigma factor SigF
2136 GL405246.1 GCA_000146855.1_02136 CDS open 2489957-2490838 882_na     293_aa hypothetical protein
2137 GL405247.1 rRNA open 39-3163 23S ribosomal RNA
2138 GL405247.1 rRNA open 3821-5349 16S ribosomal RNA
2139 GL405248.1 GCA_000146855.1_02139 CDS open 33-1202 1170_na     389_aa hypothetical protein
2140 GL405248.1 GCA_000146855.1_02140 CDS open 1374-2255 882_na     293_aa hypothetical protein
2141 GL405249.1 tRNA open 3-77 tRNA-Asn(gtt)
2142 GL405249.1 tRNA open 83-158 tRNA-Val(tac)
2143 GL405249.1 tRNA open 173-249 tRNA-Asp(gtc)
2144 GL405249.1 tRNA open 313-388 tRNA-Thr(tgt)
2145 GL405249.1 tRNA open 403-487 tRNA-Tyr(gta)
2146 GL405249.1 tRNA open 494-567 tRNA-Gly(tcc)
2147 GL405249.1 tRNA open 575-651 tRNA-Arg(tct)
2148 GL405249.1 tRNA open 687-775 tRNA-Ser(tga)
2149 GL405249.1 tRNA open 779-871 tRNA-Ser(gct)
2150 GL405249.1 tRNA open 876-952 tRNA-Pro(tgg)
2151 GL405249.1 tRNA open 1125-1199 tRNA-Trp(cca)
2152 GL405249.1 tRNA open 1208-1284 tRNA-Pro(tgg)
2153 GL405249.1 tRNA open 1289-1365 tRNA-Ile(gat)
2154 GL405249.1 tRNA open 1392-1468 tRNA-Met(cat)
2155 GL405249.1 tRNA open 1481-1556 tRNA-Phe(gaa)
2156 GL405249.1 tRNA open 1569-1645 tRNA-Met(cat)
2157 GL405251.1 GCA_000146855.1_02157 CDS open 167-895 729_na     242_aa hypothetical protein
2158 GL405256.1 GCA_000146855.1_02158 CDS open 339-644 306_na     101_aa hypothetical protein