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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Schaalia dentiphila (GCA_000163415.1)

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PROKKA Annotations for GCA_000163415.1
Genome Selected: Schaalia dentiphila
ContigsBases CDSrRNA tmRNAtRNA
6 2431995 2070 7 1 48
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Annotation Table [page:5]    |    Number of Records Found: 2136 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 GG753639.1 GCA_000163415.1_02001 CDS open 1043150-1044724 1575_na     524_aa hypothetical protein
2002 GG753639.1 GCA_000163415.1_02002 CDS open 1044740-1045795 1056_na     351_aa tsaD tRNA N6-adenosine threonylcarbamoyltransferase
2003 GG753639.1 GCA_000163415.1_02003 CDS open 1045875-1046111 237_na     78_aa hypothetical protein
2004 GG753639.1 GCA_000163415.1_02004 CDS open 1046315-1047058 744_na     247_aa frdB Fumarate reductase iron-sulfur subunit
2005 GG753639.1 GCA_000163415.1_02005 CDS open 1047055-1049034 1980_na     659_aa frdA Fumarate reductase flavoprotein subunit
2006 GG753639.1 GCA_000163415.1_02006 CDS open 1049051-1049857 807_na     268_aa hypothetical protein
2007 GG753639.1 GCA_000163415.1_02007 CDS open 1049996-1050445 450_na     149_aa rimI N-alpha-acetyltransferase RimI
2008 GG753639.1 GCA_000163415.1_02008 CDS open 1050442-1051137 696_na     231_aa putative protein
2009 GG753639.1 GCA_000163415.1_02009 CDS open 1051147-1051719 573_na     190_aa hypothetical protein
2010 GG753639.1 GCA_000163415.1_02010 CDS open 1051716-1052984 1269_na     422_aa alr Alanine racemase
2011 GG753639.1 GCA_000163415.1_02011 CDS open 1053056-1054837 1782_na     593_aa CARKD ATP-dependent (S)-NAD(P)H-hydrate dehydratase
2012 GG753639.1 GCA_000163415.1_02012 CDS open 1054982-1056904 1923_na     640_aa glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
2013 GG753639.1 GCA_000163415.1_02013 CDS open 1057003-1058025 1023_na     340_aa coaA Pantothenate kinase
2014 GG753639.1 GCA_000163415.1_02014 CDS open 1058094-1061792 3699_na     1232_aa hypothetical protein
2015 GG753639.1 GCA_000163415.1_02015 CDS open 1061952-1062881 930_na     309_aa araQ L-arabinose transport system permease protein AraQ
2016 GG753639.1 GCA_000163415.1_02016 CDS open 1062878-1063789 912_na     303_aa hypothetical protein
2017 GG753639.1 GCA_000163415.1_02017 CDS open 1063896-1065308 1413_na     470_aa hypothetical protein
2018 GG753639.1 GCA_000163415.1_02018 CDS open 1065473-1068298 2826_na     941_aa lacZ_3 Beta-galactosidase
2019 GG753639.1 GCA_000163415.1_02019 CDS open 1068410-1069495 1086_na     361_aa rbsR Ribose operon repressor
2020 GG753639.1 GCA_000163415.1_02020 CDS open 1069607-1070509 903_na     300_aa yiaX1 putative protein YiaX1
2021 GG753639.1 GCA_000163415.1_02021 CDS open 1070515-1071990 1476_na     491_aa nanT Sialic acid transporter NanT
2022 GG753639.1 GCA_000163415.1_02022 CDS open 1072254-1074491 2238_na     745_aa hypothetical protein
2023 GG753639.1 GCA_000163415.1_02023 CDS open 1074633-1075985 1353_na     450_aa glmM Phosphoglucosamine mutase
2024 GG753639.1 GCA_000163415.1_02024 CDS open 1076167-1076658 492_na     163_aa rpsI 30S ribosomal protein S9
2025 GG753639.1 GCA_000163415.1_02025 CDS open 1076697-1077140 444_na     147_aa rplM 50S ribosomal protein L13
2026 GG753639.1 GCA_000163415.1_02026 CDS open 1077344-1078252 909_na     302_aa truA tRNA pseudouridine synthase A
2027 GG753639.1 GCA_000163415.1_02027 CDS open 1078249-1078998 750_na     249_aa hypothetical protein
2028 GG753639.1 GCA_000163415.1_02028 CDS open 1079084-1079653 570_na     189_aa hypothetical protein
2029 GG753639.1 GCA_000163415.1_02029 CDS open 1079697-1080692 996_na     331_aa rpoA DNA-directed RNA polymerase subunit alpha
2030 GG753639.1 GCA_000163415.1_02030 CDS open 1080817-1081227 411_na     136_aa rpsK 30S ribosomal protein S11
2031 GG753639.1 GCA_000163415.1_02031 CDS open 1081289-1081663 375_na     124_aa rpsM 30S ribosomal protein S13
2032 GG753639.1 GCA_000163415.1_02032 CDS open 1081812-1081925 114_na     37_aa rpmJ 50S ribosomal protein L36
2033 GG753639.1 GCA_000163415.1_02033 CDS open 1081966-1082187 222_na     73_aa infA Translation initiation factor IF-1
2034 GG753639.1 GCA_000163415.1_02034 CDS open 1082645-1083511 867_na     288_aa map_2 Methionine aminopeptidase 1
2035 GG753639.1 GCA_000163415.1_02035 CDS open 1083557-1084135 579_na     192_aa adk Adenylate kinase
2036 GG753639.1 GCA_000163415.1_02036 CDS open 1084132-1085424 1293_na     430_aa secY Protein translocase subunit SecY
2037 GG753639.1 GCA_000163415.1_02037 CDS open 1085682-1086146 465_na     154_aa rplO 50S ribosomal protein L15
2038 GG753639.1 GCA_000163415.1_02038 CDS open 1086149-1086334 186_na     61_aa rpmD 50S ribosomal protein L30
2039 GG753639.1 GCA_000163415.1_02039 CDS open 1086334-1087023 690_na     229_aa hypothetical protein
2040 GG753639.1 GCA_000163415.1_02040 CDS open 1087052-1087423 372_na     123_aa rplR 50S ribosomal protein L18
2041 GG753639.1 GCA_000163415.1_02041 CDS open 1087423-1087965 543_na     180_aa rplF 50S ribosomal protein L6
2042 GG753639.1 GCA_000163415.1_02042 CDS open 1087981-1088379 399_na     132_aa rpsH 30S ribosomal protein S8
2043 GG753639.1 GCA_000163415.1_02043 CDS open 1088442-1088627 186_na     61_aa rpsZ 30S ribosomal protein S14 type Z
2044 GG753639.1 GCA_000163415.1_02044 CDS open 1088631-1089176 546_na     181_aa rplE 50S ribosomal protein L5
2045 GG753639.1 GCA_000163415.1_02045 CDS open 1089179-1089610 432_na     143_aa hypothetical protein
2046 GG753639.1 GCA_000163415.1_02046 CDS open 1089614-1089982 369_na     122_aa rplN 50S ribosomal protein L14
2047 GG753639.1 GCA_000163415.1_02047 CDS open 1090071-1090337 267_na     88_aa rpsQ 30S ribosomal protein S17
2048 GG753639.1 GCA_000163415.1_02048 CDS open 1090343-1090576 234_na     77_aa rpmC 50S ribosomal protein L29
2049 GG753639.1 GCA_000163415.1_02049 CDS open 1090576-1090995 420_na     139_aa rplP 50S ribosomal protein L16
2050 GG753639.1 GCA_000163415.1_02050 CDS open 1091001-1091810 810_na     269_aa rpsC 30S ribosomal protein S3
2051 GG753639.1 GCA_000163415.1_02051 CDS open 1091812-1092183 372_na     123_aa rplV 50S ribosomal protein L22
2052 GG753639.1 GCA_000163415.1_02052 CDS open 1092213-1092494 282_na     93_aa rpsS 30S ribosomal protein S19
2053 GG753639.1 GCA_000163415.1_02053 CDS open 1092511-1093347 837_na     278_aa rplB 50S ribosomal protein L2
2054 GG753639.1 GCA_000163415.1_02054 CDS open 1093370-1093675 306_na     101_aa rplW 50S ribosomal protein L23
2055 GG753639.1 GCA_000163415.1_02055 CDS open 1093672-1094316 645_na     214_aa rplD 50S ribosomal protein L4
2056 GG753639.1 GCA_000163415.1_02056 CDS open 1094319-1094984 666_na     221_aa rplC 50S ribosomal protein L3
2057 GG753639.1 GCA_000163415.1_02057 CDS open 1094996-1095304 309_na     102_aa rpsJ 30S ribosomal protein S10
2058 GG753639.1 GCA_000163415.1_02058 CDS open 1095912-1097099 1188_na     395_aa tuf Elongation factor Tu
2059 GG753639.1 GCA_000163415.1_02059 CDS open 1097246-1099369 2124_na     707_aa fusA Elongation factor G
2060 GG753639.1 GCA_000163415.1_02060 CDS open 1099450-1099920 471_na     156_aa rpsG 30S ribosomal protein S7
2061 GG753639.1 GCA_000163415.1_02061 CDS open 1099920-1100294 375_na     124_aa rpsL 30S ribosomal protein S12
2062 GG753639.1 GCA_000163415.1_02062 CDS open 1100801-1103752 2952_na     983_aa hypothetical protein
2063 GG753639.1 GCA_000163415.1_02063 CDS open 1104938-1105429 492_na     163_aa hypothetical protein
2064 GG753639.1 GCA_000163415.1_02064 CDS open 1105398-1106066 669_na     222_aa hypothetical protein
2065 GG753639.1 GCA_000163415.1_02065 CDS open 1105933-1109835 3903_na     1300_aa rpoC DNA-directed RNA polymerase subunit beta
2066 GG753639.1 GCA_000163415.1_02066 CDS open 1109851-1113327 3477_na     1158_aa rpoB DNA-directed RNA polymerase subunit beta
2067 GG753639.1 tRNA open 1113580-1113656 tRNA-Met(cat)
2068 GG753639.1 GCA_000163415.1_02068 CDS open 1113798-1115540 1743_na     580_aa poxB Pyruvate dehydrogenase [ubiquinone]
2069 GG753639.1 GCA_000163415.1_02069 CDS open 1115613-1116209 597_na     198_aa hypothetical protein
2070 GG753639.1 GCA_000163415.1_02070 CDS open 1116364-1116996 633_na     210_aa hypothetical protein
2071 GG753639.1 GCA_000163415.1_02071 CDS open 1117489-1118151 663_na     220_aa hypothetical protein
2072 GG753639.1 tRNA open 1119729-1119804 tRNA-Ala(cgc)
2073 GG753639.1 GCA_000163415.1_02073 CDS open 1121287-1121985 699_na     232_aa hypothetical protein
2074 GG753639.1 GCA_000163415.1_02074 CDS open 1121982-1123208 1227_na     408_aa moaE2_2 Molybdopterin molybdenumtransferase 2
2075 GG753639.1 GCA_000163415.1_02075 CDS open 1123214-1124137 924_na     307_aa gtaB UTP--glucose-1-phosphate uridylyltransferase
2076 GG753639.1 GCA_000163415.1_02076 CDS open 1124178-1124822 645_na     214_aa 5-formyltetrahydrofolate cyclo-ligase
2077 GG753639.1 GCA_000163415.1_02077 CDS open 1125109-1125522 414_na     137_aa mscL Large-conductance mechanosensitive channel
2078 GG753639.1 GCA_000163415.1_02078 CDS open 1125652-1125873 222_na     73_aa hypothetical protein
2079 GG753639.1 GCA_000163415.1_02079 CDS open 1125866-1130074 4209_na     1402_aa hypothetical protein
2080 GG753639.1 GCA_000163415.1_02080 CDS open 1130100-1130783 684_na     227_aa yicL putative inner membrane transporter YicL
2081 GG753639.1 GCA_000163415.1_02081 CDS open 1130793-1131017 225_na     74_aa hypothetical protein
2082 GG753639.1 tRNA open 1131032-1131105 tRNA-Arg(cct)
2083 GG753639.1 GCA_000163415.1_02083 CDS open 1131259-1132191 933_na     310_aa Universal stress proteinMSMEI_3859
2084 GG753639.1 GCA_000163415.1_02084 CDS open 1132325-1133074 750_na     249_aa hypothetical protein
2085 GG753639.1 misc_RNA open 1133077-1133229 ydaO-yuaA
2086 GG753639.1 GCA_000163415.1_02086 CDS open 1133454-1134164 711_na     236_aa hypothetical protein
2087 GG753639.1 GCA_000163415.1_02087 CDS open 1134305-1135432 1128_na     375_aa serC Phosphoserine aminotransferase
2088 GG753639.1 GCA_000163415.1_02088 CDS open 1135449-1136738 1290_na     429_aa entS_3 Enterobactin exporter EntS
2089 GG753639.1 GCA_000163415.1_02089 CDS open 1136885-1138384 1500_na     499_aa pbuG Guaninehypoxanthine permease PbuG
2090 GG753639.1 GCA_000163415.1_02090 CDS open 1138458-1139312 855_na     284_aa putative protein
2091 GG753639.1 GCA_000163415.1_02091 CDS open 1139305-1139682 378_na     125_aa hypothetical protein
2092 GG753639.1 GCA_000163415.1_02092 CDS open 1139887-1141974 2088_na     695_aa hypothetical protein
2093 GG753639.1 GCA_000163415.1_02093 CDS open 1142230-1143777 1548_na     515_aa hypothetical protein
2094 GG753639.1 GCA_000163415.1_02094 CDS open 1144160-1145188 1029_na     342_aa hypothetical protein
2095 GG753639.1 GCA_000163415.1_02095 CDS open 1146984-1147709 726_na     241_aa pspA Phage shock protein A
2096 GG753639.1 GCA_000163415.1_02096 CDS open 1147819-1148391 573_na     190_aa hypothetical protein
2097 GG753639.1 GCA_000163415.1_02097 CDS open 1148471-1149124 654_na     217_aa fabR HTH-type transcriptional repressor FabR
2098 GG753639.1 GCA_000163415.1_02098 CDS open 1149156-1151438 2283_na     760_aa pyrK Dihydroorotate dehydrogenase B (NAD(+))%2C electron transfer subunit
2099 GG753639.1 GCA_000163415.1_02099 CDS open 1151516-1153036 1521_na     506_aa glpK Glycerol kinase
2100 GG753639.1 GCA_000163415.1_02100 CDS open 1153174-1153959 786_na     261_aa glpF Glycerol uptake facilitator protein
2101 GG753639.1 GCA_000163415.1_02101 CDS open 1154274-1155215 942_na     313_aa deoR_2 Deoxyribonucleoside regulator
2102 GG753639.1 GCA_000163415.1_02102 CDS open 1155299-1156918 1620_na     539_aa lysS1 Lysine--tRNA ligase 1
2103 GG753639.1 GCA_000163415.1_02103 CDS open 1156975-1157862 888_na     295_aa scrK_3 Fructokinase
2104 GG753639.1 GCA_000163415.1_02104 CDS open 1157939-1159312 1374_na     457_aa malH Maltose-6-phosphate glucosidase MalH
2105 GG753639.1 GCA_000163415.1_02105 CDS open 1159411-1160106 696_na     231_aa mshB 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase
2106 GG753639.1 GCA_000163415.1_02106 CDS open 1160175-1161497 1323_na     440_aa hypothetical protein
2107 GG753639.1 GCA_000163415.1_02107 CDS open 1161528-1162373 846_na     281_aa ngcG Diacetylchitobiose uptake system permease protein NgcG
2108 GG753639.1 GCA_000163415.1_02108 CDS open 1162360-1163238 879_na     292_aa ugpA_2 sn-glycerol-3-phosphate transport system permease protein UgpA
2109 GG753639.1 GCA_000163415.1_02109 CDS open 1163421-1163855 435_na     144_aa panD Aspartate 1-decarboxylase
2110 GG753639.1 GCA_000163415.1_02110 CDS open 1163852-1164805 954_na     317_aa panC Pantothenate synthetase
2111 GG753639.1 GCA_000163415.1_02111 CDS open 1164938-1165846 909_na     302_aa hypothetical protein
2112 GG753639.1 GCA_000163415.1_02112 CDS open 1165851-1167410 1560_na     519_aa hypothetical protein
2113 GG753639.1 GCA_000163415.1_02113 CDS open 1167407-1167880 474_na     157_aa hypothetical protein
2114 GG753639.1 GCA_000163415.1_02114 CDS open 1168036-1168758 723_na     240_aa tcrX_2 putative transcriptional regulatory protein TcrX
2115 GG753639.1 GCA_000163415.1_02115 CDS open 1168760-1170226 1467_na     488_aa sasA_3 Adaptive-response sensory-kinase SasA
2116 GG753639.1 GCA_000163415.1_02116 CDS open 1170402-1171364 963_na     320_aa hypothetical protein
2117 GG753639.1 GCA_000163415.1_02117 CDS open 1171584-1171877 294_na     97_aa hypothetical protein
2118 GG753639.1 GCA_000163415.1_02118 CDS open 1172010-1173638 1629_na     542_aa groL1 60 kDa chaperonin 1
2119 GG753639.1 GCA_000163415.1_02119 CDS open 1174056-1174901 846_na     281_aa hypothetical protein
2120 GG753639.1 GCA_000163415.1_02120 CDS open 1175222-1175800 579_na     192_aa hypothetical protein
2121 GG753639.1 GCA_000163415.1_02121 CDS open 1175887-1176597 711_na     236_aa ung Uracil-DNA glycosylase
2122 GG753639.1 tRNA open 1176667-1176742 tRNA-Thr(tgt)
2123 GG753639.1 GCA_000163415.1_02123 CDS open 1176956-1177888 933_na     310_aa hypothetical protein
2124 GG753639.1 GCA_000163415.1_02124 CDS open 1177949-1179880 1932_na     643_aa pknD_3 Serinethreonine-protein kinase PknD
2125 GG753639.1 misc_RNA open 1180081-1180140 msiK
2126 GG753639.1 GCA_000163415.1_02126 CDS open 1180142-1181272 1131_na     376_aa msiK Diacetylchitobiose uptake system ATP-binding protein MsiK
2127 GG753639.1 GCA_000163415.1_02127 CDS open 1181428-1182699 1272_na     423_aa hypothetical protein
2128 GG753639.1 GCA_000163415.1_02128 CDS open 1182740-1183483 744_na     247_aa ugpQ Glycerophosphodiester phosphodiesterase%2C cytoplasmic
2129 GG753639.1 GCA_000163415.1_02129 CDS open 1183627-1184832 1206_na     401_aa hypothetical protein
2130 GG753639.1 GCA_000163415.1_02130 CDS open 1185369-1186394 1026_na     341_aa fba_2 Fructose-bisphosphate aldolase
2131 GG753639.1 GCA_000163415.1_02131 CDS open 1186714-1187508 795_na     264_aa hypothetical protein
2132 GG753639.1 GCA_000163415.1_02132 CDS open 1187838-1188533 696_na     231_aa trmH tRNA (guanosine(18)-2-O)-methyltransferase
2133 GG753639.1 GCA_000163415.1_02133 CDS open 1188568-1189389 822_na     273_aa hdpA Dihydroxyacetone phosphatase
2134 GG753639.1 GCA_000163415.1_02134 CDS open 1189416-1189985 570_na     189_aa pyrE Orotate phosphoribosyltransferase
2135 GG753639.1 GCA_000163415.1_02135 CDS open 1190063-1190851 789_na     262_aa actIII Putative ketoacyl reductase
2136 GG753639.1 GCA_000163415.1_02136 CDS open 1190933-1191409 477_na     158_aa hypothetical protein