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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Delftia acidovorans (GCA_000214395.1)

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PROKKA Annotations for GCA_000214395.1
Genome Selected: Delftia acidovorans
ContigsBases CDSrRNA tmRNAtRNA
1 6685842 5900 15 1 88
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:13]    |    Number of Records Found: 6095 [13 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  11  12  13  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
6001 CP002735.1 GCA_000214395.1_06001 CDS open 6581865-6582680 816_na     271_aa hypothetical protein
6002 CP002735.1 GCA_000214395.1_06002 CDS open 6582734-6583972 1239_na     412_aa rtcB_3 RNA-splicing ligase RtcB
6003 CP002735.1 GCA_000214395.1_06003 CDS open 6584005-6584850 846_na     281_aa hypothetical protein
6004 CP002735.1 GCA_000214395.1_06004 CDS open 6584924-6586063 1140_na     379_aa hypothetical protein
6005 CP002735.1 GCA_000214395.1_06005 CDS open 6586762-6588369 1608_na     535_aa norR_6 Anaerobic nitric oxide reductase transcription regulator NorR
6006 CP002735.1 GCA_000214395.1_06006 CDS open 6588408-6590024 1617_na     538_aa rpoN_2 RNA polymerase sigma-54 factor
6007 CP002735.1 GCA_000214395.1_06007 CDS open 6590079-6590867 789_na     262_aa lptB_9 Lipopolysaccharide export system ATP-binding protein LptB
6008 CP002735.1 GCA_000214395.1_06008 CDS open 6590864-6591526 663_na     220_aa lptA Lipopolysaccharide export system protein LptA
6009 CP002735.1 GCA_000214395.1_06009 CDS open 6591698-6592348 651_na     216_aa dsbA Thiol:disulfide interchange protein DsbA
6010 CP002735.1 GCA_000214395.1_06010 CDS open 6592430-6593119 690_na     229_aa ftsN Cell division protein FtsN
6011 CP002735.1 GCA_000214395.1_06011 CDS open 6593140-6594837 1698_na     565_aa argS Arginine--tRNA ligase
6012 CP002735.1 GCA_000214395.1_06012 CDS open 6594892-6595338 447_na     148_aa hypothetical protein
6013 CP002735.1 GCA_000214395.1_06013 CDS open 6595446-6596051 606_na     201_aa hypothetical protein
6014 CP002735.1 GCA_000214395.1_06014 CDS open 6596080-6597015 936_na     311_aa dmlR_30 HTH-type transcriptional regulator DmlR
6015 CP002735.1 GCA_000214395.1_06015 CDS open 6597320-6599512 2193_na     730_aa glcB Malate synthase G
6016 CP002735.1 GCA_000214395.1_06016 CDS open 6599593-6599847 255_na     84_aa hypothetical protein
6017 CP002735.1 GCA_000214395.1_06017 CDS open 6599865-6600053 189_na     62_aa ywhB 2-hydroxymuconate tautomerase
6018 CP002735.1 GCA_000214395.1_06018 CDS open 6600117-6600785 669_na     222_aa hypothetical protein
6019 CP002735.1 GCA_000214395.1_06019 CDS open 6600825-6601652 828_na     275_aa yafJ Putative glutamine amidotransferase YafJ
6020 CP002735.1 rRNA open 6601834-6601940 5S ribosomal RNA
6021 CP002735.1 rRNA open 6602071-6604943 23S ribosomal RNA
6022 CP002735.1 tRNA open 6605345-6605420 tRNA-Ala(tgc)
6023 CP002735.1 tRNA open 6605451-6605527 tRNA-Ile(gat)
6024 CP002735.1 rRNA open 6605613-6607141 16S ribosomal RNA
6025 CP002735.1 rRNA open 6607480-6607586 5S ribosomal RNA
6026 CP002735.1 rRNA open 6607715-6610587 23S ribosomal RNA
6027 CP002735.1 tRNA open 6610990-6611065 tRNA-Ala(tgc)
6028 CP002735.1 tRNA open 6611096-6611172 tRNA-Ile(gat)
6029 CP002735.1 rRNA open 6611258-6612786 16S ribosomal RNA
6030 CP002735.1 GCA_000214395.1_06030 CDS open 6613236-6614186 951_na     316_aa gshB Glutathione synthetase
6031 CP002735.1 GCA_000214395.1_06031 CDS open 6614267-6615448 1182_na     393_aa ydcO_2 Inner membrane protein YdcO
6032 CP002735.1 GCA_000214395.1_06032 CDS open 6615499-6617382 1884_na     627_aa kup Low affinity potassium transport system protein kup
6033 CP002735.1 GCA_000214395.1_06033 CDS open 6617465-6618760 1296_na     431_aa hypothetical protein
6034 CP002735.1 GCA_000214395.1_06034 CDS open 6618842-6620308 1467_na     488_aa trkH Trk system potassium uptake protein TrkH
6035 CP002735.1 GCA_000214395.1_06035 CDS open 6620319-6621776 1458_na     485_aa trkA Trk system potassium uptake protein TrkA
6036 CP002735.1 GCA_000214395.1_06036 CDS open 6621866-6623146 1281_na     426_aa proA_3 Gamma-glutamyl phosphate reductase
6037 CP002735.1 GCA_000214395.1_06037 CDS open 6623335-6623637 303_na     100_aa hypothetical protein
6038 CP002735.1 GCA_000214395.1_06038 CDS open 6623648-6624700 1053_na     350_aa holA DNA polymerase III subunit delta
6039 CP002735.1 GCA_000214395.1_06039 CDS open 6624706-6625212 507_na     168_aa lptE LPS-assembly lipoprotein LptE
6040 CP002735.1 GCA_000214395.1_06040 CDS open 6625257-6627992 2736_na     911_aa leuS Leucine--tRNA ligase
6041 CP002735.1 GCA_000214395.1_06041 CDS open 6628355-6629569 1215_na     404_aa ybdG Miniconductance mechanosensitive channel YbdG
6042 CP002735.1 GCA_000214395.1_06042 CDS open 6629597-6630076 480_na     159_aa tolR Tol-Pal system protein TolR
6043 CP002735.1 GCA_000214395.1_06043 CDS open 6630101-6630835 735_na     244_aa tolQ_4 Tol-Pal system protein TolQ
6044 CP002735.1 GCA_000214395.1_06044 CDS open 6630900-6631736 837_na     278_aa dapB 4-hydroxy-tetrahydrodipicolinate reductase
6045 CP002735.1 GCA_000214395.1_06045 CDS open 6631861-6632370 510_na     169_aa bamE Outer membrane protein assembly factor BamE
6046 CP002735.1 GCA_000214395.1_06046 CDS open 6632566-6632991 426_na     141_aa fur_2 Ferric uptake regulation protein
6047 CP002735.1 GCA_000214395.1_06047 CDS open 6633135-6634712 1578_na     525_aa hypothetical protein
6048 CP002735.1 GCA_000214395.1_06048 CDS open 6634731-6635945 1215_na     404_aa hypothetical protein
6049 CP002735.1 GCA_000214395.1_06049 CDS open 6635954-6636895 942_na     313_aa sigJ ECF RNA polymerase sigma factor SigJ
6050 CP002735.1 GCA_000214395.1_06050 CDS open 6636966-6637457 492_na     163_aa nudJ Phosphatase NudJ
6051 CP002735.1 GCA_000214395.1_06051 CDS open 6637556-6638080 525_na     174_aa hypothetical protein
6052 CP002735.1 GCA_000214395.1_06052 CDS open 6638175-6639176 1002_na     333_aa putative cyclic di-GMP phosphodiesterase
6053 CP002735.1 GCA_000214395.1_06053 CDS open 6639173-6642943 3771_na     1256_aa rcsC_22 Sensor histidine kinase RcsC
6054 CP002735.1 GCA_000214395.1_06054 CDS open 6643094-6643354 261_na     86_aa hypothetical protein
6055 CP002735.1 GCA_000214395.1_06055 CDS open 6643776-6644744 969_na     322_aa hypothetical protein
6056 CP002735.1 GCA_000214395.1_06056 CDS open 6644990-6646348 1359_na     452_aa bauA Beta-alanine--pyruvate aminotransferase
6057 CP002735.1 GCA_000214395.1_06057 CDS open 6646428-6647444 1017_na     338_aa hypothetical protein
6058 CP002735.1 GCA_000214395.1_06058 CDS open 6647558-6648574 1017_na     338_aa nanR_3 HTH-type transcriptional repressor NanR
6059 CP002735.1 GCA_000214395.1_06059 CDS open 6648819-6650024 1206_na     401_aa hypothetical protein
6060 CP002735.1 GCA_000214395.1_06060 CDS open 6650224-6651084 861_na     286_aa livH_15 High-affinity branched-chain amino acid transport system permease protein LivH
6061 CP002735.1 GCA_000214395.1_06061 CDS open 6651090-6652082 993_na     330_aa hypothetical protein
6062 CP002735.1 GCA_000214395.1_06062 CDS open 6652079-6652858 780_na     259_aa lptB_10 Lipopolysaccharide export system ATP-binding protein LptB
6063 CP002735.1 GCA_000214395.1_06063 CDS open 6652855-6653565 711_na     236_aa livF_16 High-affinity branched-chain amino acid transport ATP-binding protein LivF
6064 CP002735.1 GCA_000214395.1_06064 CDS open 6653598-6654893 1296_na     431_aa hyuC_2 N-carbamoyl-L-amino-acid hydrolase
6065 CP002735.1 GCA_000214395.1_06065 CDS open 6654890-6656356 1467_na     488_aa hypothetical protein
6066 CP002735.1 GCA_000214395.1_06066 CDS open 6656565-6658874 2310_na     769_aa maeB_2 NADP-dependent malic enzyme
6067 CP002735.1 GCA_000214395.1_06067 CDS open 6659185-6659604 420_na     139_aa hypothetical protein
6068 CP002735.1 GCA_000214395.1_06068 CDS open 6659754-6660179 426_na     141_aa hypothetical protein
6069 CP002735.1 GCA_000214395.1_06069 CDS open 6660269-6661060 792_na     263_aa rsmA Ribosomal RNA small subunit methyltransferase A
6070 CP002735.1 GCA_000214395.1_06070 CDS open 6661113-6662540 1428_na     475_aa surA_2 Chaperone SurA
6071 CP002735.1 GCA_000214395.1_06071 CDS open 6662582-6664906 2325_na     774_aa lptD LPS-assembly protein LptD
6072 CP002735.1 GCA_000214395.1_06072 CDS open 6665110-6666207 1098_na     365_aa amgK N-acetylmuramateN-acetylglucosamine kinase
6073 CP002735.1 GCA_000214395.1_06073 CDS open 6666221-6666973 753_na     250_aa rsmE Ribosomal RNA small subunit methyltransferase E
6074 CP002735.1 GCA_000214395.1_06074 CDS open 6666960-6667844 885_na     294_aa hypothetical protein
6075 CP002735.1 GCA_000214395.1_06075 CDS open 6667844-6669352 1509_na     502_aa hypothetical protein
6076 CP002735.1 GCA_000214395.1_06076 CDS open 6669364-6669861 498_na     165_aa hypothetical protein
6077 CP002735.1 GCA_000214395.1_06077 CDS open 6669914-6670564 651_na     216_aa hypothetical protein
6078 CP002735.1 GCA_000214395.1_06078 CDS open 6670548-6671711 1164_na     387_aa glpQ_3 Glycerophosphodiester phosphodiesterase
6079 CP002735.1 GCA_000214395.1_06079 CDS open 6671784-6672368 585_na     194_aa metXA Bifunctional methionine biosynthesis protein MetXAMetW
6080 CP002735.1 GCA_000214395.1_06080 CDS open 6672365-6673513 1149_na     382_aa metXS Homoserine O-succinyltransferase
6081 CP002735.1 GCA_000214395.1_06081 CDS open 6673620-6674234 615_na     204_aa mneA Putative manganese exporter
6082 CP002735.1 GCA_000214395.1_06082 CDS open 6674692-6675066 375_na     124_aa hypothetical protein
6083 CP002735.1 GCA_000214395.1_06083 CDS open 6675322-6675861 540_na     179_aa hypothetical protein
6084 CP002735.1 GCA_000214395.1_06084 CDS open 6675967-6676767 801_na     266_aa hypothetical protein
6085 CP002735.1 GCA_000214395.1_06085 CDS open 6676809-6677426 618_na     205_aa lptC Lipopolysaccharide export system protein LptC
6086 CP002735.1 GCA_000214395.1_06086 CDS open 6677423-6677983 561_na     186_aa kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
6087 CP002735.1 GCA_000214395.1_06087 CDS open 6677983-6678984 1002_na     333_aa kdsD Arabinose 5-phosphate isomerase KdsD
6088 CP002735.1 GCA_000214395.1_06088 CDS open 6679083-6679640 558_na     185_aa apt Adenine phosphoribosyltransferase
6089 CP002735.1 GCA_000214395.1_06089 CDS open 6679658-6680410 753_na     250_aa hypothetical protein
6090 CP002735.1 GCA_000214395.1_06090 CDS open 6680587-6681066 480_na     159_aa hypothetical protein
6091 CP002735.1 GCA_000214395.1_06091 CDS open 6681286-6682707 1422_na     473_aa mnmE tRNA modification GTPase MnmE
6092 CP002735.1 GCA_000214395.1_06092 CDS open 6682806-6684518 1713_na     570_aa yidC Membrane protein insertase YidC
6093 CP002735.1 GCA_000214395.1_06093 CDS open 6684515-6684805 291_na     96_aa yidD Putative membrane protein insertion efficiency factor
6094 CP002735.1 GCA_000214395.1_06094 CDS open 6684802-6685272 471_na     156_aa hypothetical protein
6095 CP002735.1 GCA_000214395.1_06095 CDS open 6685370-6685504 135_na     44_aa rpmH 50S ribosomal protein L34