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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Fusobacterium necrophorum (GCA_000292975.1)

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PROKKA Annotations for GCA_000292975.1
Genome Selected: Fusobacterium necrophorum
ContigsBases CDSrRNA tmRNAtRNA
87 2166823 2090 3 1 32
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Annotation Table [page:5]    |    Number of Records Found: 2146 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 ALKK01000083.1 GCA_000292975.1_02001 CDS open 30851-33598 2748_na     915_aa cpoB_1 Cell division coordinator CpoB
2002 ALKK01000083.1 GCA_000292975.1_02002 CDS open 33807-34466 660_na     219_aa hypothetical protein
2003 ALKK01000083.1 GCA_000292975.1_02003 CDS open 34678-35685 1008_na     335_aa cysK Cysteine synthase
2004 ALKK01000083.1 GCA_000292975.1_02004 CDS open 35895-36359 465_na     154_aa hypothetical protein
2005 ALKK01000083.1 GCA_000292975.1_02005 CDS open 36406-37056 651_na     216_aa hypothetical protein
2006 ALKK01000083.1 GCA_000292975.1_02006 CDS open 37377-37814 438_na     145_aa hypothetical protein
2007 ALKK01000083.1 GCA_000292975.1_02007 CDS open 37783-37989 207_na     68_aa hypothetical protein
2008 ALKK01000083.1 GCA_000292975.1_02008 CDS open 38207-41395 3189_na     1062_aa btuB_11 Vitamin B12 transporter BtuB
2009 ALKK01000083.1 GCA_000292975.1_02009 CDS open 42097-43068 972_na     323_aa oppF_3 Oligopeptide transport ATP-binding protein OppF
2010 ALKK01000083.1 GCA_000292975.1_02010 CDS open 43058-44065 1008_na     335_aa oppD_6 Oligopeptide transport ATP-binding protein OppD
2011 ALKK01000083.1 GCA_000292975.1_02011 CDS open 44086-44952 867_na     288_aa gsiD_3 Glutathione transport system permease protein GsiD
2012 ALKK01000083.1 GCA_000292975.1_02012 CDS open 44967-45893 927_na     308_aa gsiC_4 Glutathione transport system permease protein GsiC
2013 ALKK01000083.1 GCA_000292975.1_02013 CDS open 45979-47511 1533_na     510_aa hbpA_3 Heme-binding protein A
2014 ALKK01000083.1 GCA_000292975.1_02014 CDS open 47618-48700 1083_na     360_aa hypothetical protein
2015 ALKK01000083.1 GCA_000292975.1_02015 CDS open 48760-49023 264_na     87_aa rpsO 30S ribosomal protein S15
2016 ALKK01000083.1 GCA_000292975.1_02016 CDS open 49113-51302 2190_na     729_aa ftsH ATP-dependent zinc metalloprotease FtsH
2017 ALKK01000083.1 GCA_000292975.1_02017 CDS open 51299-52636 1338_na     445_aa tilS tRNA(Ile)-lysidine synthase
2018 ALKK01000083.1 GCA_000292975.1_02018 CDS open 52653-53597 945_na     314_aa mltG Endolytic murein transglycosylase
2019 ALKK01000083.1 GCA_000292975.1_02019 CDS open 53615-55201 1587_na     528_aa cshA DEAD-box ATP-dependent RNA helicase CshA
2020 ALKK01000083.1 GCA_000292975.1_02020 CDS open 55267-55728 462_na     153_aa hypothetical protein
2021 ALKK01000083.1 GCA_000292975.1_02021 CDS open 55896-57329 1434_na     477_aa pepA cytosol aminopeptidase
2022 ALKK01000083.1 GCA_000292975.1_02022 CDS open 57429-58574 1146_na     381_aa eis N-acetyltransferase Eis
2023 ALKK01000083.1 GCA_000292975.1_02023 CDS open 58549-59124 576_na     191_aa hypothetical protein
2024 ALKK01000083.1 GCA_000292975.1_02024 CDS open 59332-59592 261_na     86_aa rpsT 30S ribosomal protein S20
2025 ALKK01000083.1 GCA_000292975.1_02025 CDS open 59727-60686 960_na     319_aa fixB Protein FixB
2026 ALKK01000083.1 GCA_000292975.1_02026 CDS open 60700-61425 726_na     241_aa hypothetical protein
2027 ALKK01000083.1 GCA_000292975.1_02027 CDS open 61594-63075 1482_na     493_aa lysS Lysine--tRNA ligase
2028 ALKK01000083.1 GCA_000292975.1_02028 CDS open 63102-64325 1224_na     407_aa cpoB_2 Cell division coordinator CpoB
2029 ALKK01000083.1 GCA_000292975.1_02029 CDS open 64328-64708 381_na     126_aa hypothetical protein
2030 ALKK01000083.1 GCA_000292975.1_02030 CDS open 64708-65037 330_na     109_aa hypothetical protein
2031 ALKK01000083.1 GCA_000292975.1_02031 CDS open 65076-65543 468_na     155_aa rlmH Ribosomal RNA large subunit methyltransferase H
2032 ALKK01000083.1 GCA_000292975.1_02032 CDS open 65574-67367 1794_na     597_aa mutL DNA mismatch repair protein MutL
2033 ALKK01000083.1 GCA_000292975.1_02033 CDS open 67516-69330 1815_na     604_aa hypothetical protein
2034 ALKK01000083.1 GCA_000292975.1_02034 CDS open 69397-71925 2529_na     842_aa hypothetical protein
2035 ALKK01000083.1 GCA_000292975.1_02035 CDS open 72181-73470 1290_na     429_aa mleN_4 Malate-2H(+)Na(+)-lactate antiporter
2036 ALKK01000083.1 GCA_000292975.1_02036 CDS open 73464-74348 885_na     294_aa lgt Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase
2037 ALKK01000083.1 GCA_000292975.1_02037 CDS open 74396-76099 1704_na     567_aa hndD NADP-reducing hydrogenase subunit HndD
2038 ALKK01000083.1 GCA_000292975.1_02038 CDS open 76116-77900 1785_na     594_aa hndC NADP-reducing hydrogenase subunit HndC
2039 ALKK01000083.1 GCA_000292975.1_02039 CDS open 77913-78395 483_na     160_aa hndA NADP-reducing hydrogenase subunit HndA
2040 ALKK01000083.1 GCA_000292975.1_02040 CDS open 78566-80221 1656_na     551_aa hypothetical protein
2041 ALKK01000083.1 GCA_000292975.1_02041 CDS open 80208-80984 777_na     258_aa putative response regulatory protein
2042 ALKK01000083.1 GCA_000292975.1_02042 CDS open 80998-81888 891_na     296_aa msrAB Peptide methionine sulfoxide reductase MsrAMsrB
2043 ALKK01000083.1 GCA_000292975.1_02043 CDS open 81951-82625 675_na     224_aa resA Thiol-disulfide oxidoreductase ResA
2044 ALKK01000083.1 GCA_000292975.1_02044 CDS open 82665-83318 654_na     217_aa dsbD Thiol:disulfide interchange protein DsbD
2045 ALKK01000083.1 GCA_000292975.1_02045 CDS open 83495-86038 2544_na     847_aa hypothetical protein
2046 ALKK01000083.1 misc_RNA open 86164-86339 Cobalamin
2047 ALKK01000083.1 GCA_000292975.1_02047 CDS open 86457-87185 729_na     242_aa putative phosphatase
2048 ALKK01000083.1 GCA_000292975.1_02048 CDS open 87325-88149 825_na     274_aa Deoxyribonuclease
2049 ALKK01000083.1 GCA_000292975.1_02049 CDS open 88149-88802 654_na     217_aa thiN Thiamine pyrophosphokinase
2050 ALKK01000083.1 GCA_000292975.1_02050 CDS open 88990-89751 762_na     253_aa hypothetical protein
2051 ALKK01000083.1 GCA_000292975.1_02051 CDS open 89748-90188 441_na     146_aa hypothetical protein
2052 ALKK01000083.1 GCA_000292975.1_02052 CDS open 90451-90834 384_na     127_aa hypothetical protein
2053 ALKK01000083.1 GCA_000292975.1_02053 CDS open 90881-92170 1290_na     429_aa Uracil permease
2054 ALKK01000083.1 GCA_000292975.1_02054 CDS open 92185-93960 1776_na     591_aa pepF1 Oligoendopeptidase F%2C plasmid
2055 ALKK01000083.1 GCA_000292975.1_02055 CDS open 93969-95663 1695_na     564_aa sppA Protease 4
2056 ALKK01000083.1 GCA_000292975.1_02056 CDS open 95731-96090 360_na     119_aa Nucleoid-associated protein
2057 ALKK01000083.1 GCA_000292975.1_02057 CDS open 96185-96853 669_na     222_aa hypothetical protein
2058 ALKK01000083.1 GCA_000292975.1_02058 CDS open 96846-98786 1941_na     646_aa metG Methionine--tRNA ligase
2059 ALKK01000083.1 GCA_000292975.1_02059 CDS open 98815-99699 885_na     294_aa gtaB UTP--glucose-1-phosphate uridylyltransferase
2060 ALKK01000083.1 misc_RNA open 99725-99812 SAM
2061 ALKK01000083.1 GCA_000292975.1_02061 CDS open 99897-101045 1149_na     382_aa metK S-adenosylmethionine synthase
2062 ALKK01000083.1 GCA_000292975.1_02062 CDS open 101160-101840 681_na     226_aa hypothetical protein
2063 ALKK01000083.1 GCA_000292975.1_02063 CDS open 101890-102642 753_na     250_aa hypothetical protein
2064 ALKK01000083.1 GCA_000292975.1_02064 CDS open 102664-104187 1524_na     507_aa hypothetical protein
2065 ALKK01000083.1 GCA_000292975.1_02065 CDS open 104197-104910 714_na     237_aa opuBA_2 Choline transport ATP-binding protein OpuBA
2066 ALKK01000083.1 GCA_000292975.1_02066 CDS open 104897-105244 348_na     115_aa hypothetical protein
2067 ALKK01000083.1 GCA_000292975.1_02067 CDS open 105442-105960 519_na     172_aa niaR putative transcription repressor NiaR
2068 ALKK01000083.1 GCA_000292975.1_02068 CDS open 105953-106813 861_na     286_aa nadC putative nicotinate-nucleotide pyrophosphorylase [carboxylating]
2069 ALKK01000083.1 GCA_000292975.1_02069 CDS open 106791-108068 1278_na     425_aa nadB L-aspartate oxidase
2070 ALKK01000083.1 GCA_000292975.1_02070 CDS open 108065-108967 903_na     300_aa nadA Quinolinate synthase A
2071 ALKK01000083.1 GCA_000292975.1_02071 CDS open 109068-109691 624_na     207_aa pyrE Orotate phosphoribosyltransferase
2072 ALKK01000083.1 GCA_000292975.1_02072 CDS open 109684-110901 1218_na     405_aa D-hydantoinase
2073 ALKK01000083.1 GCA_000292975.1_02073 CDS open 110895-111611 717_na     238_aa pyrF Orotidine 5-phosphate decarboxylase
2074 ALKK01000083.1 GCA_000292975.1_02074 CDS open 111616-112536 921_na     306_aa pyrD Dihydroorotate dehydrogenase B (NAD(+))%2C catalytic subunit
2075 ALKK01000083.1 GCA_000292975.1_02075 CDS open 112546-113346 801_na     266_aa pyrK_2 Dihydroorotate dehydrogenase B (NAD(+))%2C electron transfer subunit
2076 ALKK01000083.1 GCA_000292975.1_02076 CDS open 113356-114261 906_na     301_aa pyrB Aspartate carbamoyltransferase catalytic subunit
2077 ALKK01000083.1 GCA_000292975.1_02077 CDS open 114556-115524 969_na     322_aa thiB Thiamine-binding periplasmic protein
2078 ALKK01000083.1 GCA_000292975.1_02078 CDS open 115711-117423 1713_na     570_aa argS Arginine--tRNA ligase
2079 ALKK01000083.1 tRNA open 117786-117862 tRNA-Arg(tcg)
2080 ALKK01000084.1 GCA_000292975.1_02080 CDS open 1192-1467 276_na     91_aa hypothetical protein
2081 ALKK01000084.1 GCA_000292975.1_02081 CDS open 1489-1992 504_na     167_aa hypothetical protein
2082 ALKK01000084.1 GCA_000292975.1_02082 CDS open 1995-2372 378_na     125_aa hypothetical protein
2083 ALKK01000084.1 GCA_000292975.1_02083 CDS open 2514-2792 279_na     92_aa hypothetical protein
2084 ALKK01000084.1 GCA_000292975.1_02084 CDS open 2896-3006 111_na     36_aa hypothetical protein
2085 ALKK01000084.1 GCA_000292975.1_02085 CDS open 3016-3669 654_na     217_aa hypothetical protein
2086 ALKK01000084.1 GCA_000292975.1_02086 CDS open 3679-3912 234_na     77_aa hypothetical protein
2087 ALKK01000084.1 GCA_000292975.1_02087 CDS open 3965-4063 99_na     32_aa hypothetical protein
2088 ALKK01000085.1 GCA_000292975.1_02088 CDS open 260-382 123_na     40_aa hypothetical protein
2089 ALKK01000085.1 GCA_000292975.1_02089 CDS open 932-1159 228_na     75_aa hypothetical protein
2090 ALKK01000087.1 GCA_000292975.1_02090 CDS open 3266-3856 591_na     196_aa hypothetical protein
2091 ALKK01000087.1 GCA_000292975.1_02091 CDS open 4368-5888 1521_na     506_aa mleN_5 Malate-2H(+)Na(+)-lactate antiporter
2092 ALKK01000087.1 GCA_000292975.1_02092 CDS open 5976-6779 804_na     267_aa cheB Protein-glutamate methylesteraseprotein-glutamine glutaminase
2093 ALKK01000087.1 GCA_000292975.1_02093 CDS open 6754-8049 1296_na     431_aa hypothetical protein
2094 ALKK01000087.1 GCA_000292975.1_02094 CDS open 8167-9624 1458_na     485_aa hypothetical protein
2095 ALKK01000087.1 GCA_000292975.1_02095 CDS open 9664-10284 621_na     206_aa Protein adenylyltransferase NmFic
2096 ALKK01000087.1 GCA_000292975.1_02096 CDS open 10329-11180 852_na     283_aa hypothetical protein
2097 ALKK01000087.1 GCA_000292975.1_02097 CDS open 11195-12109 915_na     304_aa hypothetical protein
2098 ALKK01000087.1 GCA_000292975.1_02098 CDS open 12129-14282 2154_na     717_aa hypothetical protein
2099 ALKK01000087.1 GCA_000292975.1_02099 CDS open 14375-14599 225_na     74_aa hypothetical protein
2100 ALKK01000087.1 GCA_000292975.1_02100 CDS open 14602-16092 1491_na     496_aa hypothetical protein
2101 ALKK01000087.1 GCA_000292975.1_02101 CDS open 16104-17531 1428_na     475_aa hsdM Type I restriction enzyme EcoKI M protein
2102 ALKK01000087.1 GCA_000292975.1_02102 CDS open 17544-20807 3264_na     1087_aa hypothetical protein
2103 ALKK01000087.1 GCA_000292975.1_02103 CDS open 20835-21647 813_na     270_aa cbiK Sirohydrochlorin cobaltochelatase
2104 ALKK01000087.1 GCA_000292975.1_02104 CDS open 21661-22413 753_na     250_aa exoA Exodeoxyribonuclease
2105 ALKK01000087.1 GCA_000292975.1_02105 CDS open 22427-23629 1203_na     400_aa mnmE_2 tRNA modification GTPase MnmE
2106 ALKK01000087.1 GCA_000292975.1_02106 CDS open 23626-25023 1398_na     465_aa bioB_2 Biotin synthase
2107 ALKK01000087.1 GCA_000292975.1_02107 CDS open 25068-26114 1047_na     348_aa [FeFe] hydrogenase maturase subunit HydE
2108 ALKK01000087.1 GCA_000292975.1_02108 CDS open 26108-26374 267_na     88_aa hypothetical protein
2109 ALKK01000087.1 GCA_000292975.1_02109 CDS open 26371-26838 468_na     155_aa ogt Methylated-DNA--protein-cysteine methyltransferase%2C constitutive
2110 ALKK01000087.1 GCA_000292975.1_02110 CDS open 26848-28227 1380_na     459_aa apeA putative M18 family aminopeptidase 1
2111 ALKK01000087.1 GCA_000292975.1_02111 CDS open 28410-28592 183_na     60_aa hypothetical protein
2112 ALKK01000087.1 GCA_000292975.1_02112 CDS open 29089-29301 213_na     70_aa hypothetical protein
2113 ALKK01000087.1 GCA_000292975.1_02113 CDS open 29371-31626 2256_na     751_aa btuB_12 Vitamin B12 transporter BtuB
2114 ALKK01000087.1 GCA_000292975.1_02114 CDS open 31716-32516 801_na     266_aa hypothetical protein
2115 ALKK01000087.1 GCA_000292975.1_02115 CDS open 32569-33150 582_na     193_aa gmhA Phosphoheptose isomerase
2116 ALKK01000087.1 GCA_000292975.1_02116 CDS open 33164-34021 858_na     285_aa hdfR HTH-type transcriptional regulator HdfR
2117 ALKK01000087.1 GCA_000292975.1_02117 CDS open 34082-36745 2664_na     887_aa valS Valine--tRNA ligase
2118 ALKK01000087.1 GCA_000292975.1_02118 CDS open 36729-37343 615_na     204_aa engB putative GTP-binding protein EngB
2119 ALKK01000087.1 GCA_000292975.1_02119 CDS open 37355-39667 2313_na     770_aa lon1 Lon protease 1
2120 ALKK01000087.1 GCA_000292975.1_02120 CDS open 39677-40969 1293_na     430_aa clpX ATP-dependent Clp protease ATP-binding subunit ClpX
2121 ALKK01000087.1 GCA_000292975.1_02121 CDS open 40978-41565 588_na     195_aa clpP_3 ATP-dependent Clp protease proteolytic subunit
2122 ALKK01000087.1 GCA_000292975.1_02122 CDS open 41703-42992 1290_na     429_aa tig Trigger factor
2123 ALKK01000087.1 GCA_000292975.1_02123 CDS open 43003-44679 1677_na     558_aa recJ Single-stranded-DNA-specific exonuclease RecJ
2124 ALKK01000087.1 GCA_000292975.1_02124 CDS open 44684-45052 369_na     122_aa rbfA Ribosome-binding factor A
2125 ALKK01000087.1 GCA_000292975.1_02125 CDS open 45068-47206 2139_na     712_aa infB Translation initiation factor IF-2
2126 ALKK01000087.1 GCA_000292975.1_02126 CDS open 47223-47744 522_na     173_aa hypothetical protein
2127 ALKK01000087.1 GCA_000292975.1_02127 CDS open 47746-48807 1062_na     353_aa nusA Transcription terminationantitermination protein NusA
2128 ALKK01000087.1 GCA_000292975.1_02128 CDS open 48824-49285 462_na     153_aa rimP Ribosome maturation factor RimP
2129 ALKK01000087.1 GCA_000292975.1_02129 CDS open 49500-49931 432_na     143_aa glmS_2 Glutamate mutase sigma subunit
2130 ALKK01000087.1 GCA_000292975.1_02130 CDS open 49916-51274 1359_na     452_aa hypothetical protein
2131 ALKK01000087.1 GCA_000292975.1_02131 CDS open 51245-52258 1014_na     337_aa hypothetical protein
2132 ALKK01000087.1 GCA_000292975.1_02132 CDS open 52438-53856 1419_na     472_aa ybjL Putative transport protein YbjL
2133 ALKK01000087.1 GCA_000292975.1_02133 CDS open 53906-54307 402_na     133_aa nudG_2 CTP pyrophosphohydrolase
2134 ALKK01000087.1 GCA_000292975.1_02134 CDS open 54362-55807 1446_na     481_aa panF Sodiumpantothenate symporter
2135 ALKK01000087.1 GCA_000292975.1_02135 CDS open 55801-56061 261_na     86_aa hypothetical protein
2136 ALKK01000087.1 GCA_000292975.1_02136 CDS open 56051-56836 786_na     261_aa coaX Type III pantothenate kinase
2137 ALKK01000087.1 GCA_000292975.1_02137 CDS open 56863-57615 753_na     250_aa gsiA Glutathione import ATP-binding protein GsiA
2138 ALKK01000087.1 GCA_000292975.1_02138 CDS open 57612-58313 702_na     233_aa dppD Dipeptide transport ATP-binding protein DppD
2139 ALKK01000087.1 GCA_000292975.1_02139 CDS open 58310-59089 780_na     259_aa gsiD_4 Glutathione transport system permease protein GsiD
2140 ALKK01000087.1 GCA_000292975.1_02140 CDS open 59091-60005 915_na     304_aa nikB_2 Nickel import system permease protein NikB
2141 ALKK01000087.1 GCA_000292975.1_02141 CDS open 60018-61505 1488_na     495_aa dppA_3 Periplasmic dipeptide transport protein
2142 ALKK01000087.1 GCA_000292975.1_02142 CDS open 61657-63057 1401_na     466_aa hypothetical protein
2143 ALKK01000087.1 GCA_000292975.1_02143 CDS open 63157-64656 1500_na     499_aa gltX Glutamate--tRNA ligase
2144 ALKK01000087.1 GCA_000292975.1_02144 CDS open 64836-65699 864_na     287_aa aidA Quorum-quenching protein AidA
2145 ALKK01000087.1 GCA_000292975.1_02145 CDS open 65842-66441 600_na     199_aa hypothetical protein
2146 ALKK01000087.1 GCA_000292975.1_02146 CDS open 66482-67615 1134_na     377_aa hypothetical protein