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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_000316075.2)

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PROKKA Annotations for GCA_000316075.2
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
4 2611013 2412 15 1 61
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Annotation Table [page:6]    |    Number of Records Found: 2575 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 KB373324.1 GCA_000316075.2_02501 CDS open 329231-329773 543_na     180_aa hypothetical protein
2502 KB373324.1 GCA_000316075.2_02502 CDS open 329884-330411 528_na     175_aa yacP putative protein YacP
2503 KB373324.1 GCA_000316075.2_02503 CDS open 330411-331157 747_na     248_aa Putative TrmH family tRNArRNA methyltransferase
2504 KB373324.1 GCA_000316075.2_02504 CDS open 331160-331564 405_na     134_aa mrnC Mini-ribonuclease 3
2505 KB373324.1 GCA_000316075.2_02505 CDS open 331557-332957 1401_na     466_aa cysS Cysteine--tRNA ligase
2506 KB373324.1 GCA_000316075.2_02506 CDS open 332941-333582 642_na     213_aa cysE Serine acetyltransferase
2507 KB373324.1 GCA_000316075.2_02507 CDS open 333945-335402 1458_na     485_aa gltX Glutamate--tRNA ligase
2508 KB373324.1 GCA_000316075.2_02508 CDS open 335726-336793 1068_na     355_aa yacL putative PIN and TRAM-domain containing protein YacL
2509 KB373324.1 GCA_000316075.2_02509 CDS open 336828-338195 1368_na     455_aa radA DNA repair protein RadA
2510 KB373324.1 GCA_000316075.2_02510 CDS open 338426-340885 2460_na     819_aa clpC ATP-dependent Clp protease ATP-binding subunit ClpC
2511 KB373324.1 GCA_000316075.2_02511 CDS open 340899-341915 1017_na     338_aa mcsB Protein-arginine kinase
2512 KB373324.1 GCA_000316075.2_02512 CDS open 341905-342462 558_na     185_aa mcsA Protein-arginine kinase activator protein
2513 KB373324.1 GCA_000316075.2_02513 CDS open 342489-342959 471_na     156_aa ctsR Transcriptional regulator CtsR
2514 KB373324.1 GCA_000316075.2_02514 CDS open 343104-344318 1215_na     404_aa nupC_2 Nucleoside permease NupC
2515 KB373324.1 GCA_000316075.2_02515 CDS open 344549-345103 555_na     184_aa pdxT Pyridoxal 5-phosphate synthase subunit PdxT
2516 KB373324.1 GCA_000316075.2_02516 CDS open 345107-345994 888_na     295_aa pdxS Pyridoxal 5-phosphate synthase subunit PdxS
2517 KB373324.1 GCA_000316075.2_02517 CDS open 346092-347474 1383_na     460_aa gabR HTH-type transcriptional regulatory protein GabR
2518 KB373324.1 rRNA open 347728-347836 5S ribosomal RNA
2519 KB373324.1 rRNA open 347908-350825 23S ribosomal RNA
2520 KB373324.1 tRNA open 351239-351315 tRNA-Ile(gat)
2521 KB373324.1 rRNA open 351414-352924 16S ribosomal RNA
2522 KB373325.1 rRNA open 6-114 5S ribosomal RNA
2523 KB373325.1 GCA_000316075.2_02523 CDS open 314-1630 1317_na     438_aa ISL3 family transposase ISSha1
2524 KB373325.1 GCA_000316075.2_02524 CDS open 1897-7677 5781_na     1926_aa hypothetical protein
2525 KB373325.1 misc_RNA open 7757-7989 S35
2526 KB373325.1 GCA_000316075.2_02526 CDS open 8222-8749 528_na     175_aa speG Spermidine N(1)-acetyltransferase
2527 KB373325.1 GCA_000316075.2_02527 CDS open 8775-10118 1344_na     447_aa speA Arginine decarboxylase
2528 KB373325.1 GCA_000316075.2_02528 CDS open 10122-10739 618_na     205_aa tmk Thymidylate kinase
2529 KB373325.1 GCA_000316075.2_02529 CDS open 10767-11096 330_na     109_aa darA Cyclic di-AMP receptor A
2530 KB373325.1 GCA_000316075.2_02530 CDS open 11393-12319 927_na     308_aa hypothetical protein
2531 KB373325.1 GCA_000316075.2_02531 CDS open 12320-13123 804_na     267_aa hypothetical protein
2532 KB373325.1 GCA_000316075.2_02532 CDS open 13140-13487 348_na     115_aa yabA Initiation-control protein YabA
2533 KB373325.1 GCA_000316075.2_02533 CDS open 13580-14305 726_na     241_aa yfiC tRNA1(Val) (adenine(37)-N6)-methyltransferase
2534 KB373325.1 GCA_000316075.2_02534 CDS open 14298-14546 249_na     82_aa hypothetical protein
2535 KB373325.1 GCA_000316075.2_02535 CDS open 14548-15393 846_na     281_aa rsmI Ribosomal RNA small subunit methyltransferase I
2536 KB373325.1 GCA_000316075.2_02536 CDS open 15622-17595 1974_na     657_aa metG Methionine--tRNA ligase
2537 KB373325.1 GCA_000316075.2_02537 CDS open 17621-18391 771_na     256_aa dtd3 D-aminoacyl-tRNA deacylase
2538 KB373325.1 GCA_000316075.2_02538 CDS open 18531-19082 552_na     183_aa rnmV_2 Ribonuclease M5
2539 KB373325.1 GCA_000316075.2_02539 CDS open 19082-19972 891_na     296_aa rsmA Ribosomal RNA small subunit methyltransferase A
2540 KB373325.1 GCA_000316075.2_02540 CDS open 20072-20335 264_na     87_aa veg Protein Veg
2541 KB373325.1 GCA_000316075.2_02541 CDS open 20582-21430 849_na     282_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2542 KB373325.1 GCA_000316075.2_02542 CDS open 21444-22268 825_na     274_aa purR_3 Pur operon repressor
2543 KB373325.1 GCA_000316075.2_02543 CDS open 22285-22662 378_na     125_aa yabJ 2-iminobutanoate2-iminopropanoate deaminase
2544 KB373325.1 GCA_000316075.2_02544 CDS open 22734-23039 306_na     101_aa spoVG Putative septation protein SpoVG
2545 KB373325.1 GCA_000316075.2_02545 CDS open 23247-24602 1356_na     451_aa glmU Bifunctional protein GlmU
2546 KB373325.1 GCA_000316075.2_02546 CDS open 24755-25720 966_na     321_aa prs Ribose-phosphate pyrophosphokinase
2547 KB373325.1 GCA_000316075.2_02547 CDS open 25878-26528 651_na     216_aa rplY 50S ribosomal protein L25
2548 KB373325.1 GCA_000316075.2_02548 CDS open 26852-27424 573_na     190_aa pth Peptidyl-tRNA hydrolase
2549 KB373325.1 GCA_000316075.2_02549 CDS open 27421-30942 3522_na     1173_aa mfd Transcription-repair-coupling factor
2550 KB373325.1 GCA_000316075.2_02550 CDS open 30920-32449 1530_na     509_aa hypothetical protein
2551 KB373325.1 GCA_000316075.2_02551 CDS open 32451-33641 1191_na     396_aa hypothetical protein
2552 KB373325.1 GCA_000316075.2_02552 CDS open 33638-33916 279_na     92_aa hypothetical protein
2553 KB373325.1 GCA_000316075.2_02553 CDS open 33940-34338 399_na     132_aa divIC Cell division protein DivIC
2554 KB373325.1 GCA_000316075.2_02554 CDS open 34506-34904 399_na     132_aa yugI_2 General stress protein 13
2555 KB373325.1 GCA_000316075.2_02555 CDS open 35008-36300 1293_na     430_aa tilS tRNA(Ile)-lysidine synthase
2556 KB373325.1 GCA_000316075.2_02556 CDS open 36303-36842 540_na     179_aa hpt Hypoxanthine-guanine phosphoribosyltransferase
2557 KB373325.1 GCA_000316075.2_02557 CDS open 37005-37106 102_na     33_aa hypothetical protein
2558 KB373325.1 GCA_000316075.2_02558 CDS open 37120-39207 2088_na     695_aa ftsH ATP-dependent zinc metalloprotease FtsH
2559 KB373325.1 GCA_000316075.2_02559 CDS open 39388-40272 885_na     294_aa hslO 33 kDa chaperonin
2560 KB373325.1 GCA_000316075.2_02560 CDS open 40449-41381 933_na     310_aa cysK Cysteine synthase
2561 KB373325.1 GCA_000316075.2_02561 CDS open 41603-42406 804_na     267_aa folP Dihydropteroate synthase
2562 KB373325.1 GCA_000316075.2_02562 CDS open 42384-42749 366_na     121_aa folB Dihydroneopterin aldolase
2563 KB373325.1 GCA_000316075.2_02563 CDS open 42750-43229 480_na     159_aa folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2564 KB373325.1 GCA_000316075.2_02564 CDS open 43754-45241 1488_na     495_aa lysS Lysine--tRNA ligase
2565 KB373325.1 rRNA open 45653-45731 5S ribosomal RNA (partial)
2566 KB373325.1 rRNA open 45848-45956 5S ribosomal RNA
2567 KB373325.1 tRNA open 45972-46047 tRNA-Val(tac)
2568 KB373325.1 tRNA open 46056-46131 tRNA-Thr(tgt)
2569 KB373325.1 tRNA open 46137-46211 tRNA-Lys(ttt)
2570 KB373325.1 tRNA open 46226-46300 tRNA-Gly(gcc)
2571 KB373325.1 tRNA open 46308-46396 tRNA-Leu(taa)
2572 KB373325.1 tRNA open 46406-46480 tRNA-Arg(acg)
2573 KB373325.1 tRNA open 46503-46577 tRNA-Pro(tgg)
2574 KB373325.1 tRNA open 46591-46666 tRNA-Ala(tgc)
2575 KB373325.1 rRNA open 46792-48339 16S ribosomal RNA