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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Treponema denticola (GCA_000340725.1)

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PROKKA Annotations for GCA_000340725.1
Genome Selected: Treponema denticola
ContigsBases CDSrRNA tmRNAtRNA
1 2843090 2612 6 1 44
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:6]    |    Number of Records Found: 2671 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CM001798.1 GCA_000340725.1_02501 CDS open 2655888-2656274 387_na     128_aa hypothetical protein
2502 CM001798.1 GCA_000340725.1_02502 CDS open 2656476-2656823 348_na     115_aa hypothetical protein
2503 CM001798.1 GCA_000340725.1_02503 CDS open 2656952-2658022 1071_na     356_aa hypothetical protein
2504 CM001798.1 GCA_000340725.1_02504 CDS open 2658081-2658290 210_na     69_aa hypothetical protein
2505 CM001798.1 GCA_000340725.1_02505 CDS open 2658446-2658955 510_na     169_aa hypothetical protein
2506 CM001798.1 GCA_000340725.1_02506 CDS open 2658971-2659192 222_na     73_aa hypothetical protein
2507 CM001798.1 GCA_000340725.1_02507 CDS open 2659253-2659483 231_na     76_aa hypothetical protein
2508 CM001798.1 GCA_000340725.1_02508 CDS open 2659732-2661246 1515_na     504_aa hypothetical protein
2509 CM001798.1 GCA_000340725.1_02509 CDS open 2661343-2661858 516_na     171_aa hypothetical protein
2510 CM001798.1 GCA_000340725.1_02510 CDS open 2662170-2662955 786_na     261_aa hypothetical protein
2511 CM001798.1 GCA_000340725.1_02511 CDS open 2663375-2665132 1758_na     585_aa Putative multidrug export ATP-bindingpermease protein
2512 CM001798.1 GCA_000340725.1_02512 CDS open 2665149-2666891 1743_na     580_aa Putative multidrug export ATP-bindingpermease protein
2513 CM001798.1 GCA_000340725.1_02513 CDS open 2666920-2669289 2370_na     789_aa hypothetical protein
2514 CM001798.1 GCA_000340725.1_02514 CDS open 2669381-2670034 654_na     217_aa slmA Nucleoid occlusion factor SlmA
2515 CM001798.1 GCA_000340725.1_02515 CDS open 2670160-2671434 1275_na     424_aa hypothetical protein
2516 CM001798.1 GCA_000340725.1_02516 CDS open 2671591-2673645 2055_na     684_aa hypothetical protein
2517 CM001798.1 GCA_000340725.1_02517 CDS open 2673917-2674513 597_na     198_aa hypothetical protein
2518 CM001798.1 GCA_000340725.1_02518 CDS open 2674544-2676337 1794_na     597_aa pepF1_2 Oligoendopeptidase F%2C plasmid
2519 CM001798.1 GCA_000340725.1_02519 CDS open 2676452-2678197 1746_na     581_aa btuD_22 Vitamin B12 import ATP-binding protein BtuD
2520 CM001798.1 GCA_000340725.1_02520 CDS open 2678295-2678948 654_na     217_aa polC DNA polymerase III PolC-type
2521 CM001798.1 GCA_000340725.1_02521 CDS open 2678948-2680711 1764_na     587_aa pgcA Phosphoglucomutase
2522 CM001798.1 GCA_000340725.1_02522 CDS open 2680835-2681215 381_na     126_aa hypothetical protein
2523 CM001798.1 GCA_000340725.1_02523 CDS open 2681208-2681837 630_na     209_aa hypothetical protein
2524 CM001798.1 GCA_000340725.1_02524 CDS open 2681847-2683547 1701_na     566_aa comM Competence protein ComM
2525 CM001798.1 GCA_000340725.1_02525 CDS open 2683756-2685147 1392_na     463_aa aspA Aspartate ammonia-lyase
2526 CM001798.1 GCA_000340725.1_02526 CDS open 2685191-2686513 1323_na     440_aa pal_5 Peptidoglycan-associated lipoprotein
2527 CM001798.1 GCA_000340725.1_02527 CDS open 2686683-2687447 765_na     254_aa hypothetical protein
2528 CM001798.1 GCA_000340725.1_02528 CDS open 2687585-2689714 2130_na     709_aa yoaA putative ATP-dependent DNA helicase YoaA
2529 CM001798.1 GCA_000340725.1_02529 CDS open 2689900-2690658 759_na     252_aa hypothetical protein
2530 CM001798.1 GCA_000340725.1_02530 CDS open 2690683-2693445 2763_na     920_aa hypothetical protein
2531 CM001798.1 GCA_000340725.1_02531 CDS open 2693471-2693881 411_na     136_aa hypothetical protein
2532 CM001798.1 GCA_000340725.1_02532 CDS open 2694051-2695961 1911_na     636_aa hypothetical protein
2533 CM001798.1 GCA_000340725.1_02533 CDS open 2695915-2698689 2775_na     924_aa hypothetical protein
2534 CM001798.1 GCA_000340725.1_02534 CDS open 2698679-2699890 1212_na     403_aa hypothetical protein
2535 CM001798.1 GCA_000340725.1_02535 CDS open 2699905-2702871 2967_na     988_aa hypothetical protein
2536 CM001798.1 GCA_000340725.1_02536 CDS open 2703239-2703469 231_na     76_aa hypothetical protein
2537 CM001798.1 GCA_000340725.1_02537 CDS open 2703466-2703723 258_na     85_aa hypothetical protein
2538 CM001798.1 GCA_000340725.1_02538 CDS open 2703906-2705168 1263_na     420_aa hypothetical protein
2539 CM001798.1 GCA_000340725.1_02539 CDS open 2705268-2706503 1236_na     411_aa murG UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
2540 CM001798.1 GCA_000340725.1_02540 CDS open 2706532-2706999 468_na     155_aa hypothetical protein
2541 CM001798.1 GCA_000340725.1_02541 CDS open 2707208-2708497 1290_na     429_aa hypothetical protein
2542 CM001798.1 GCA_000340725.1_02542 CDS open 2708494-2709741 1248_na     415_aa kinE Sporulation kinase E
2543 CM001798.1 GCA_000340725.1_02543 CDS open 2709738-2711159 1422_na     473_aa atoC Regulatory protein AtoC
2544 CM001798.1 GCA_000340725.1_02544 CDS open 2711146-2711745 600_na     199_aa rlmE Ribosomal RNA large subunit methyltransferase E
2545 CM001798.1 GCA_000340725.1_02545 CDS open 2711735-2712631 897_na     298_aa hypothetical protein
2546 CM001798.1 GCA_000340725.1_02546 CDS open 2712638-2713915 1278_na     425_aa hypothetical protein
2547 CM001798.1 GCA_000340725.1_02547 CDS open 2714087-2715343 1257_na     418_aa gerN Na(+)H(+)-K(+) antiporter GerN
2548 CM001798.1 GCA_000340725.1_02548 CDS open 2715458-2717107 1650_na     549_aa hypothetical protein
2549 CM001798.1 GCA_000340725.1_02549 CDS open 2717127-2718899 1773_na     590_aa selB Selenocysteine-specific elongation factor
2550 CM001798.1 GCA_000340725.1_02550 CDS open 2719167-2719763 597_na     198_aa hypothetical protein
2551 CM001798.1 GCA_000340725.1_02551 CDS open 2719979-2720158 180_na     59_aa hypothetical protein
2552 CM001798.1 GCA_000340725.1_02552 CDS open 2720175-2720567 393_na     130_aa hypothetical protein
2553 CM001798.1 GCA_000340725.1_02553 CDS open 2720774-2721415 642_na     213_aa hypothetical protein
2554 CM001798.1 GCA_000340725.1_02554 CDS open 2721357-2722049 693_na     230_aa hypothetical protein
2555 CM001798.1 GCA_000340725.1_02555 CDS open 2722081-2722542 462_na     153_aa hypothetical protein
2556 CM001798.1 GCA_000340725.1_02556 CDS open 2722619-2723545 927_na     308_aa rnz Ribonuclease Z
2557 CM001798.1 GCA_000340725.1_02557 CDS open 2723684-2724757 1074_na     357_aa tmpC Membrane lipoprotein TmpC
2558 CM001798.1 GCA_000340725.1_02558 CDS open 2724846-2726369 1524_na     507_aa mglA_3 Galactosemethyl galactoside import ATP-binding protein MglA
2559 CM001798.1 GCA_000340725.1_02559 CDS open 2726362-2727459 1098_na     365_aa hypothetical protein
2560 CM001798.1 GCA_000340725.1_02560 CDS open 2727462-2728394 933_na     310_aa hypothetical protein
2561 CM001798.1 GCA_000340725.1_02561 CDS open 2728417-2729454 1038_na     345_aa hypothetical protein
2562 CM001798.1 GCA_000340725.1_02562 CDS open 2729468-2729794 327_na     108_aa hypothetical protein
2563 CM001798.1 GCA_000340725.1_02563 CDS open 2729871-2730428 558_na     185_aa hypothetical protein
2564 CM001798.1 tRNA open 2730572-2730644 tRNA-His(gtg)
2565 CM001798.1 tRNA open 2730675-2730750 tRNA-Arg(tcg)
2566 CM001798.1 GCA_000340725.1_02566 CDS open 2730856-2731476 621_na     206_aa rpsD 30S ribosomal protein S4
2567 CM001798.1 GCA_000340725.1_02567 CDS open 2731621-2734401 2781_na     926_aa hypothetical protein
2568 CM001798.1 GCA_000340725.1_02568 CDS open 2734398-2735462 1065_na     354_aa hypothetical protein
2569 CM001798.1 GCA_000340725.1_02569 CDS open 2735531-2736289 759_na     252_aa hypothetical protein
2570 CM001798.1 GCA_000340725.1_02570 CDS open 2736436-2737317 882_na     293_aa hypothetical protein
2571 CM001798.1 GCA_000340725.1_02571 CDS open 2737394-2737498 105_na     34_aa hypothetical protein
2572 CM001798.1 GCA_000340725.1_02572 CDS open 2737488-2737676 189_na     62_aa hypothetical protein
2573 CM001798.1 GCA_000340725.1_02573 CDS open 2738201-2741452 3252_na     1083_aa hypothetical protein
2574 CM001798.1 GCA_000340725.1_02574 CDS open 2741522-2742070 549_na     182_aa hypothetical protein
2575 CM001798.1 GCA_000340725.1_02575 CDS open 2743060-2743710 651_na     216_aa hypothetical protein
2576 CM001798.1 GCA_000340725.1_02576 CDS open 2743769-2744047 279_na     92_aa hypothetical protein
2577 CM001798.1 tRNA open 2744116-2744191 tRNA-Arg(cct)
2578 CM001798.1 GCA_000340725.1_02578 CDS open 2744622-2745746 1125_na     374_aa hypothetical protein
2579 CM001798.1 GCA_000340725.1_02579 CDS open 2745747-2746604 858_na     285_aa hypothetical protein
2580 CM001798.1 GCA_000340725.1_02580 CDS open 2746625-2747380 756_na     251_aa hypothetical protein
2581 CM001798.1 GCA_000340725.1_02581 CDS open 2747390-2749144 1755_na     584_aa hypothetical protein
2582 CM001798.1 tRNA open 2749367-2749438 tRNA-Gly(tcc)
2583 CM001798.1 GCA_000340725.1_02583 CDS open 2749557-2750543 987_na     328_aa hypothetical protein
2584 CM001798.1 GCA_000340725.1_02584 CDS open 2750615-2751163 549_na     182_aa slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD
2585 CM001798.1 GCA_000340725.1_02585 CDS open 2751494-2751778 285_na     94_aa hypothetical protein
2586 CM001798.1 GCA_000340725.1_02586 CDS open 2751937-2752299 363_na     120_aa hypothetical protein
2587 CM001798.1 GCA_000340725.1_02587 CDS open 2752594-2753004 411_na     136_aa hypothetical protein
2588 CM001798.1 GCA_000340725.1_02588 CDS open 2753046-2753405 360_na     119_aa hypothetical protein
2589 CM001798.1 GCA_000340725.1_02589 CDS open 2753433-2755004 1572_na     523_aa hypothetical protein
2590 CM001798.1 GCA_000340725.1_02590 CDS open 2754979-2755932 954_na     317_aa hypothetical protein
2591 CM001798.1 GCA_000340725.1_02591 CDS open 2755929-2758559 2631_na     876_aa hypothetical protein
2592 CM001798.1 GCA_000340725.1_02592 CDS open 2758556-2760046 1491_na     496_aa glpK Glycerol kinase
2593 CM001798.1 GCA_000340725.1_02593 CDS open 2760196-2761371 1176_na     391_aa bdhA NADH-dependent butanol dehydrogenase A
2594 CM001798.1 GCA_000340725.1_02594 CDS open 2761379-2762410 1032_na     343_aa ruvB_2 Holliday junction ATP-dependent DNA helicase RuvB
2595 CM001798.1 GCA_000340725.1_02595 CDS open 2762431-2763438 1008_na     335_aa rlmK Ribosomal RNA large subunit methyltransferase K
2596 CM001798.1 GCA_000340725.1_02596 CDS open 2763440-2764072 633_na     210_aa rex1 Redox-sensing transcriptional repressor Rex 1
2597 CM001798.1 GCA_000340725.1_02597 CDS open 2764462-2766402 1941_na     646_aa dxs 1-deoxy-D-xylulose-5-phosphate synthase
2598 CM001798.1 GCA_000340725.1_02598 CDS open 2766406-2767230 825_na     274_aa cdaA Cyclic di-AMP synthase CdaA
2599 CM001798.1 GCA_000340725.1_02599 CDS open 2767220-2768179 960_na     319_aa hypothetical protein
2600 CM001798.1 GCA_000340725.1_02600 CDS open 2768181-2768558 378_na     125_aa acpS Holo-[acyl-carrier-protein] synthase
2601 CM001798.1 GCA_000340725.1_02601 CDS open 2768555-2769193 639_na     212_aa hypothetical protein
2602 CM001798.1 GCA_000340725.1_02602 CDS open 2769215-2770063 849_na     282_aa btuD_23 Vitamin B12 import ATP-binding protein BtuD
2603 CM001798.1 GCA_000340725.1_02603 CDS open 2770079-2770330 252_na     83_aa hypothetical protein
2604 CM001798.1 GCA_000340725.1_02604 CDS open 2770612-2773380 2769_na     922_aa secA Protein translocase subunit SecA
2605 CM001798.1 GCA_000340725.1_02605 CDS open 2773393-2773977 585_na     194_aa purN Phosphoribosylglycinamide formyltransferase
2606 CM001798.1 GCA_000340725.1_02606 CDS open 2773997-2775598 1602_na     533_aa purH Bifunctional purine biosynthesis protein PurH
2607 CM001798.1 GCA_000340725.1_02607 CDS open 2775605-2776489 885_na     294_aa era GTPase Era
2608 CM001798.1 GCA_000340725.1_02608 CDS open 2776491-2777339 849_na     282_aa rnfB Na(+)-translocating ferredoxin:NAD(+) oxidoreductase complex subunit B
2609 CM001798.1 GCA_000340725.1_02609 CDS open 2777476-2779290 1815_na     604_aa lepA Elongation factor 4
2610 CM001798.1 GCA_000340725.1_02610 CDS open 2779459-2780223 765_na     254_aa hypothetical protein
2611 CM001798.1 GCA_000340725.1_02611 CDS open 2780500-2781888 1389_na     462_aa hypothetical protein
2612 CM001798.1 GCA_000340725.1_02612 CDS open 2781888-2782265 378_na     125_aa hypothetical protein
2613 CM001798.1 GCA_000340725.1_02613 CDS open 2782255-2782896 642_na     213_aa hypothetical protein
2614 CM001798.1 GCA_000340725.1_02614 CDS open 2782900-2784306 1407_na     468_aa mtaB Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB
2615 CM001798.1 GCA_000340725.1_02615 CDS open 2784372-2785514 1143_na     380_aa hypothetical protein
2616 CM001798.1 GCA_000340725.1_02616 CDS open 2785546-2786478 933_na     310_aa hypothetical protein
2617 CM001798.1 GCA_000340725.1_02617 CDS open 2786511-2787794 1284_na     427_aa bglA Beta-glucosidase A
2618 CM001798.1 GCA_000340725.1_02618 CDS open 2787787-2788338 552_na     183_aa rsmD Ribosomal RNA small subunit methyltransferase D
2619 CM001798.1 GCA_000340725.1_02619 CDS open 2788360-2788803 444_na     147_aa hypothetical protein
2620 CM001798.1 GCA_000340725.1_02620 CDS open 2788940-2790688 1749_na     582_aa ettA Energy-dependent translational throttle protein EttA
2621 CM001798.1 GCA_000340725.1_02621 CDS open 2790702-2791427 726_na     241_aa hypothetical protein
2622 CM001798.1 GCA_000340725.1_02622 CDS open 2791476-2792954 1479_na     492_aa hypothetical protein
2623 CM001798.1 GCA_000340725.1_02623 CDS open 2792954-2793727 774_na     257_aa rsmE Ribosomal RNA small subunit methyltransferase E
2624 CM001798.1 GCA_000340725.1_02624 CDS open 2793708-2794448 741_na     246_aa N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase
2625 CM001798.1 GCA_000340725.1_02625 CDS open 2794454-2795581 1128_na     375_aa hypothetical protein
2626 CM001798.1 GCA_000340725.1_02626 CDS open 2795708-2796556 849_na     282_aa hypothetical protein
2627 CM001798.1 GCA_000340725.1_02627 CDS open 2796802-2797662 861_na     286_aa hypothetical protein
2628 CM001798.1 GCA_000340725.1_02628 CDS open 2797832-2798671 840_na     279_aa hypothetical protein
2629 CM001798.1 GCA_000340725.1_02629 CDS open 2799143-2802196 3054_na     1017_aa hypothetical protein
2630 CM001798.1 GCA_000340725.1_02630 CDS open 2802229-2802765 537_na     178_aa ruvC Crossover junction endodeoxyribonuclease RuvC
2631 CM001798.1 GCA_000340725.1_02631 CDS open 2802758-2803363 606_na     201_aa ruvA Holliday junction ATP-dependent DNA helicase RuvA
2632 CM001798.1 GCA_000340725.1_02632 CDS open 2803388-2804359 972_na     323_aa hypothetical protein
2633 CM001798.1 GCA_000340725.1_02633 CDS open 2804401-2804589 189_na     62_aa hypothetical protein
2634 CM001798.1 GCA_000340725.1_02634 CDS open 2804605-2805135 531_na     176_aa hypothetical protein
2635 CM001798.1 GCA_000340725.1_02635 CDS open 2805137-2806330 1194_na     397_aa hypothetical protein
2636 CM001798.1 GCA_000340725.1_02636 CDS open 2806341-2806655 315_na     104_aa hypothetical protein
2637 CM001798.1 GCA_000340725.1_02637 CDS open 2806887-2807408 522_na     173_aa hypothetical protein
2638 CM001798.1 GCA_000340725.1_02638 CDS open 2807411-2808154 744_na     247_aa queE 7-carboxy-7-deazaguanine synthase
2639 CM001798.1 GCA_000340725.1_02639 CDS open 2808154-2808441 288_na     95_aa hypothetical protein
2640 CM001798.1 GCA_000340725.1_02640 CDS open 2808623-2808946 324_na     107_aa hypothetical protein
2641 CM001798.1 GCA_000340725.1_02641 CDS open 2808936-2809277 342_na     113_aa hypothetical protein
2642 CM001798.1 GCA_000340725.1_02642 CDS open 2809692-2810444 753_na     250_aa yknY_3 putative ABC transporter ATP-binding protein YknY
2643 CM001798.1 GCA_000340725.1_02643 CDS open 2810461-2811981 1521_na     506_aa hypothetical protein
2644 CM001798.1 GCA_000340725.1_02644 CDS open 2811997-2813331 1335_na     444_aa hypothetical protein
2645 CM001798.1 GCA_000340725.1_02645 CDS open 2813338-2814201 864_na     287_aa hypothetical protein
2646 CM001798.1 GCA_000340725.1_02646 CDS open 2814203-2815654 1452_na     483_aa hypothetical protein
2647 CM001798.1 GCA_000340725.1_02647 CDS open 2816002-2816259 258_na     85_aa hypothetical protein
2648 CM001798.1 GCA_000340725.1_02648 CDS open 2816259-2816627 369_na     122_aa hypothetical protein
2649 CM001798.1 GCA_000340725.1_02649 CDS open 2816951-2818216 1266_na     421_aa xerC_3 Tyrosine recombinase XerC
2650 CM001798.1 GCA_000340725.1_02650 CDS open 2820812-2821456 645_na     214_aa hypothetical protein
2651 CM001798.1 GCA_000340725.1_02651 CDS open 2821539-2822369 831_na     276_aa hypothetical protein
2652 CM001798.1 GCA_000340725.1_02652 CDS open 2823672-2824061 390_na     129_aa hypothetical protein
2653 CM001798.1 GCA_000340725.1_02653 CDS open 2824416-2825291 876_na     291_aa hypothetical protein
2654 CM001798.1 GCA_000340725.1_02654 CDS open 2826143-2827168 1026_na     341_aa hypothetical protein
2655 CM001798.1 GCA_000340725.1_02655 CDS open 2827327-2827818 492_na     163_aa hypothetical protein
2656 CM001798.1 GCA_000340725.1_02656 CDS open 2827982-2828761 780_na     259_aa hypothetical protein
2657 CM001798.1 GCA_000340725.1_02657 CDS open 2830236-2830550 315_na     104_aa hypothetical protein
2658 CM001798.1 GCA_000340725.1_02658 CDS open 2830565-2830948 384_na     127_aa hypothetical protein
2659 CM001798.1 GCA_000340725.1_02659 CDS open 2832519-2832893 375_na     124_aa hypothetical protein
2660 CM001798.1 GCA_000340725.1_02660 CDS open 2832991-2833611 621_na     206_aa hypothetical protein
2661 CM001798.1 GCA_000340725.1_02661 CDS open 2833716-2834561 846_na     281_aa hypothetical protein
2662 CM001798.1 GCA_000340725.1_02662 CDS open 2834772-2834861 90_na     29_aa hypothetical protein
2663 CM001798.1 GCA_000340725.1_02663 CDS open 2834926-2836332 1407_na     468_aa moaA_2 GTP 3%2C8-cyclase
2664 CM001798.1 GCA_000340725.1_02664 CDS open 2836307-2837893 1587_na     528_aa hypothetical protein
2665 CM001798.1 GCA_000340725.1_02665 CDS open 2838069-2838839 771_na     256_aa hypothetical protein
2666 CM001798.1 GCA_000340725.1_02666 CDS open 2838933-2839511 579_na     192_aa hypothetical protein
2667 CM001798.1 GCA_000340725.1_02667 CDS open 2839645-2839890 246_na     81_aa hypothetical protein
2668 CM001798.1 GCA_000340725.1_02668 CDS open 2839890-2840210 321_na     106_aa hypothetical protein
2669 CM001798.1 GCA_000340725.1_02669 CDS open 2840322-2841119 798_na     265_aa hypothetical protein
2670 CM001798.1 GCA_000340725.1_02670 CDS open 2841217-2842032 816_na     271_aa hypothetical protein
2671 CM001798.1 GCA_000340725.1_02671 CDS open 2842105-2842812 708_na     235_aa hypothetical protein