HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Treponema denticola (GCA_000413115.1)

Select a Genome:
PROKKA Annotations for GCA_000413115.1
Genome Selected: Treponema denticola
ContigsBases CDSrRNA tmRNAtRNA
3 2825999 2607 6 1 44
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 2666 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:6]    |    Number of Records Found: 2666 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 KE332533.1 GCA_000413115.1_02501 CDS open 2642740-2643804 1065_na     354_aa rfuC putative riboflavin import permease protein RfuC
2502 KE332533.1 GCA_000413115.1_02502 CDS open 2643801-2644637 837_na     278_aa rfuD putative riboflavin import permease protein RfuD
2503 KE332533.1 GCA_000413115.1_02503 CDS open 2644719-2645327 609_na     202_aa lemA Protein LemA
2504 KE332533.1 GCA_000413115.1_02504 CDS open 2645333-2646112 780_na     259_aa hypothetical protein
2505 KE332533.1 GCA_000413115.1_02505 CDS open 2646114-2646857 744_na     247_aa glpQ Glycerophosphodiester phosphodiesterase
2506 KE332533.1 GCA_000413115.1_02506 CDS open 2646902-2647813 912_na     303_aa hypothetical protein
2507 KE332533.1 GCA_000413115.1_02507 CDS open 2647797-2648147 351_na     116_aa hypothetical protein
2508 KE332533.1 GCA_000413115.1_02508 CDS open 2648238-2649377 1140_na     379_aa spsE Spore coat polysaccharide biosynthesis protein SpsE
2509 KE332533.1 GCA_000413115.1_02509 CDS open 2649381-2649794 414_na     137_aa hypothetical protein
2510 KE332533.1 GCA_000413115.1_02510 CDS open 2649806-2651755 1950_na     649_aa hypothetical protein
2511 KE332533.1 GCA_000413115.1_02511 CDS open 2651757-2652944 1188_na     395_aa dinB DNA polymerase IV
2512 KE332533.1 GCA_000413115.1_02512 CDS open 2652941-2656366 3426_na     1141_aa hypothetical protein
2513 KE332533.1 GCA_000413115.1_02513 CDS open 2656388-2657185 798_na     265_aa ymdB_3 2%2C3-cyclic-nucleotide 2-phosphodiesterase
2514 KE332533.1 GCA_000413115.1_02514 CDS open 2657355-2658194 840_na     279_aa dtd3_3 D-aminoacyl-tRNA deacylase
2515 KE332533.1 GCA_000413115.1_02515 CDS open 2658251-2658463 213_na     70_aa hypothetical protein
2516 KE332533.1 GCA_000413115.1_02516 CDS open 2658527-2659090 564_na     187_aa efp Elongation factor P
2517 KE332533.1 GCA_000413115.1_02517 CDS open 2659274-2660509 1236_na     411_aa hypothetical protein
2518 KE332533.1 GCA_000413115.1_02518 CDS open 2660811-2661017 207_na     68_aa hypothetical protein
2519 KE332533.1 GCA_000413115.1_02519 CDS open 2661208-2662980 1773_na     590_aa argS Arginine--tRNA ligase
2520 KE332533.1 GCA_000413115.1_02520 CDS open 2663055-2663909 855_na     284_aa hypothetical protein
2521 KE332533.1 GCA_000413115.1_02521 CDS open 2663918-2664595 678_na     225_aa hypothetical protein
2522 KE332533.1 GCA_000413115.1_02522 CDS open 2664651-2666087 1437_na     478_aa hypothetical protein
2523 KE332533.1 GCA_000413115.1_02523 CDS open 2666119-2667540 1422_na     473_aa asnS Asparagine--tRNA ligase
2524 KE332533.1 GCA_000413115.1_02524 CDS open 2667687-2668646 960_na     319_aa hypothetical protein
2525 KE332533.1 GCA_000413115.1_02525 CDS open 2668668-2670443 1776_na     591_aa pyrD Dihydroorotate dehydrogenase
2526 KE332533.1 GCA_000413115.1_02526 CDS open 2670627-2671649 1023_na     340_aa yejB Inner membrane ABC transporter permease protein YejB
2527 KE332533.1 GCA_000413115.1_02527 CDS open 2671664-2673163 1500_na     499_aa hypothetical protein
2528 KE332533.1 GCA_000413115.1_02528 CDS open 2673227-2675164 1938_na     645_aa hypothetical protein
2529 KE332533.1 GCA_000413115.1_02529 CDS open 2675251-2676231 981_na     326_aa oppD_4 Oligopeptide transport ATP-binding protein OppD
2530 KE332533.1 GCA_000413115.1_02530 CDS open 2676231-2677187 957_na     318_aa oppF_4 Oligopeptide transport ATP-binding protein OppF
2531 KE332533.1 GCA_000413115.1_02531 CDS open 2677272-2679215 1944_na     647_aa hypothetical protein
2532 KE332533.1 GCA_000413115.1_02532 CDS open 2679304-2679495 192_na     63_aa hypothetical protein
2533 KE332533.1 tRNA open 2679554-2679627 tRNA-Asn(gtt)
2534 KE332533.1 GCA_000413115.1_02534 CDS open 2679801-2680445 645_na     214_aa yqgN putative protein YqgN
2535 KE332533.1 GCA_000413115.1_02535 CDS open 2680453-2681886 1434_na     477_aa bepA_5 Beta-barrel assembly-enhancing protease
2536 KE332533.1 GCA_000413115.1_02536 CDS open 2681942-2683888 1947_na     648_aa hypothetical protein
2537 KE332533.1 GCA_000413115.1_02537 CDS open 2684006-2685439 1434_na     477_aa hypothetical protein
2538 KE332533.1 GCA_000413115.1_02538 CDS open 2685513-2686754 1242_na     413_aa rocG Catabolic NAD-specific glutamate dehydrogenase RocG
2539 KE332533.1 misc_RNA open 2687063-2687250 Cobalamin
2540 KE332533.1 GCA_000413115.1_02540 CDS open 2687390-2688226 837_na     278_aa focA putative formate transporter 1
2541 KE332533.1 GCA_000413115.1_02541 CDS open 2688283-2689161 879_na     292_aa glxR_2 2-hydroxy-3-oxopropionate reductase
2542 KE332533.1 GCA_000413115.1_02542 CDS open 2689173-2689877 705_na     234_aa pyrE Orotate phosphoribosyltransferase
2543 KE332533.1 GCA_000413115.1_02543 CDS open 2689916-2690608 693_na     230_aa hypothetical protein
2544 KE332533.1 GCA_000413115.1_02544 CDS open 2690732-2691592 861_na     286_aa Flagellar filament 33 kDa core protein
2545 KE332533.1 GCA_000413115.1_02545 CDS open 2691912-2692724 813_na     270_aa flgG_1 Flagellar basal-body rod protein FlgG
2546 KE332533.1 GCA_000413115.1_02546 CDS open 2692746-2693540 795_na     264_aa flgG_2 Flagellar basal-body rod protein FlgG
2547 KE332533.1 GCA_000413115.1_02547 CDS open 2693591-2694193 603_na     200_aa hypothetical protein
2548 KE332533.1 GCA_000413115.1_02548 CDS open 2694198-2696291 2094_na     697_aa hypothetical protein
2549 KE332533.1 GCA_000413115.1_02549 CDS open 2696472-2699336 2865_na     954_aa uvrA UvrABC system protein A
2550 KE332533.1 GCA_000413115.1_02550 CDS open 2699346-2702585 3240_na     1079_aa lptD LPS-assembly protein LptD
2551 KE332533.1 GCA_000413115.1_02551 CDS open 2702635-2705109 2475_na     824_aa yhgF Protein YhgF
2552 KE332533.1 GCA_000413115.1_02552 CDS open 2705190-2705603 414_na     137_aa Bacteriohemerythrin
2553 KE332533.1 GCA_000413115.1_02553 CDS open 2705662-2706759 1098_na     365_aa hypothetical protein
2554 KE332533.1 GCA_000413115.1_02554 CDS open 2706794-2709199 2406_na     801_aa lon_2 Lon protease
2555 KE332533.1 GCA_000413115.1_02555 CDS open 2709201-2710397 1197_na     398_aa xseA Exodeoxyribonuclease 7 large subunit
2556 KE332533.1 GCA_000413115.1_02556 CDS open 2710493-2710921 429_na     142_aa hypothetical protein
2557 KE332533.1 GCA_000413115.1_02557 CDS open 2710918-2712765 1848_na     615_aa hypothetical protein
2558 KE332533.1 GCA_000413115.1_02558 CDS open 2712781-2713809 1029_na     342_aa hypothetical protein
2559 KE332533.1 GCA_000413115.1_02559 CDS open 2713806-2714777 972_na     323_aa putative protein
2560 KE332533.1 GCA_000413115.1_02560 CDS open 2714767-2715015 249_na     82_aa hypothetical protein
2561 KE332533.1 GCA_000413115.1_02561 CDS open 2715143-2715562 420_na     139_aa glmS Glutamate mutase sigma subunit
2562 KE332533.1 GCA_000413115.1_02562 CDS open 2715595-2716974 1380_na     459_aa hypothetical protein
2563 KE332533.1 GCA_000413115.1_02563 CDS open 2717121-2717309 189_na     62_aa rpmF 50S ribosomal protein L32
2564 KE332533.1 GCA_000413115.1_02564 CDS open 2717322-2717558 237_na     78_aa acpP Acyl carrier protein
2565 KE332533.1 GCA_000413115.1_02565 CDS open 2717582-2718322 741_na     246_aa rnc Ribonuclease 3
2566 KE332533.1 GCA_000413115.1_02566 CDS open 2718595-2719035 441_na     146_aa hspA Spore protein SP21
2567 KE332533.1 GCA_000413115.1_02567 CDS open 2719135-2719983 849_na     282_aa hypothetical protein
2568 KE332533.1 GCA_000413115.1_02568 CDS open 2720177-2721052 876_na     291_aa hypothetical protein
2569 KE332533.1 GCA_000413115.1_02569 CDS open 2721104-2722450 1347_na     448_aa cca CCA-adding enzyme
2570 KE332533.1 GCA_000413115.1_02570 CDS open 2722531-2723463 933_na     310_aa corA Cobaltmagnesium transport protein CorA
2571 KE332533.1 GCA_000413115.1_02571 CDS open 2723531-2723857 327_na     108_aa hypothetical protein
2572 KE332533.1 GCA_000413115.1_02572 CDS open 2723947-2724615 669_na     222_aa hypothetical protein
2573 KE332533.1 GCA_000413115.1_02573 CDS open 2724612-2725523 912_na     303_aa hypothetical protein
2574 KE332533.1 GCA_000413115.1_02574 CDS open 2725497-2727068 1572_na     523_aa hypothetical protein
2575 KE332533.1 GCA_000413115.1_02575 CDS open 2727214-2728077 864_na     287_aa hypothetical protein
2576 KE332533.1 GCA_000413115.1_02576 CDS open 2728081-2728350 270_na     89_aa rpsO 30S ribosomal protein S15
2577 KE332533.1 GCA_000413115.1_02577 CDS open 2728464-2730563 2100_na     699_aa pnp Polyribonucleotide nucleotidyltransferase
2578 KE332533.1 GCA_000413115.1_02578 CDS open 2730635-2731069 435_na     144_aa dut Deoxyuridine 5-triphosphate nucleotidohydrolase
2579 KE332533.1 GCA_000413115.1_02579 CDS open 2731088-2732221 1134_na     377_aa hypothetical protein
2580 KE332533.1 GCA_000413115.1_02580 CDS open 2732218-2733291 1074_na     357_aa hypothetical protein
2581 KE332533.1 GCA_000413115.1_02581 CDS open 2733383-2733802 420_na     139_aa ybaN Inner membrane protein YbaN
2582 KE332533.1 GCA_000413115.1_02582 CDS open 2733777-2734139 363_na     120_aa hypothetical protein
2583 KE332533.1 GCA_000413115.1_02583 CDS open 2734240-2734614 375_na     124_aa rpsL 30S ribosomal protein S12
2584 KE332533.1 GCA_000413115.1_02584 CDS open 2734625-2735095 471_na     156_aa rpsG 30S ribosomal protein S7
2585 KE332533.1 GCA_000413115.1_02585 CDS open 2735382-2737469 2088_na     695_aa fusA_3 Elongation factor G
2586 KE332533.1 GCA_000413115.1_02586 CDS open 2737482-2738165 684_na     227_aa hypothetical protein
2587 KE332533.1 GCA_000413115.1_02587 CDS open 2738264-2738548 285_na     94_aa hypothetical protein
2588 KE332533.1 GCA_000413115.1_02588 CDS open 2738764-2738922 159_na     52_aa Rubredoxin
2589 KE332533.1 GCA_000413115.1_02589 CDS open 2738982-2740778 1797_na     598_aa bepA_6 Beta-barrel assembly-enhancing protease
2590 KE332533.1 GCA_000413115.1_02590 CDS open 2740942-2743020 2079_na     692_aa hypothetical protein
2591 KE332533.1 GCA_000413115.1_02591 CDS open 2743034-2744383 1350_na     449_aa murJ_2 lipid II flippase MurJ
2592 KE332533.1 GCA_000413115.1_02592 CDS open 2744873-2745940 1068_na     355_aa hypothetical protein
2593 KE332533.1 GCA_000413115.1_02593 CDS open 2746215-2746979 765_na     254_aa hypothetical protein
2594 KE332533.1 GCA_000413115.1_02594 CDS open 2747162-2749009 1848_na     615_aa btuD_26 Vitamin B12 import ATP-binding protein BtuD
2595 KE332533.1 GCA_000413115.1_02595 CDS open 2749009-2750886 1878_na     625_aa btuD_27 Vitamin B12 import ATP-binding protein BtuD
2596 KE332533.1 tRNA open 2750918-2751008 tRNA-SeC(tca)
2597 KE332533.1 GCA_000413115.1_02597 CDS open 2751086-2753464 2379_na     792_aa metG Methionine--tRNA ligase
2598 KE332533.1 GCA_000413115.1_02598 CDS open 2753557-2754192 636_na     211_aa hypothetical protein
2599 KE332533.1 GCA_000413115.1_02599 CDS open 2754189-2754677 489_na     162_aa hypothetical protein
2600 KE332533.1 GCA_000413115.1_02600 CDS open 2754861-2755070 210_na     69_aa hypothetical protein
2601 KE332533.1 GCA_000413115.1_02601 CDS open 2755070-2756227 1158_na     385_aa btuD_28 Vitamin B12 import ATP-binding protein BtuD
2602 KE332533.1 GCA_000413115.1_02602 CDS open 2756220-2757212 993_na     330_aa oppD_5 Oligopeptide transport ATP-binding protein OppD
2603 KE332533.1 GCA_000413115.1_02603 CDS open 2757209-2758225 1017_na     338_aa oppC Oligopeptide transport system permease protein OppC
2604 KE332533.1 GCA_000413115.1_02604 CDS open 2758226-2759251 1026_na     341_aa gsiC_2 Glutathione transport system permease protein GsiC
2605 KE332533.1 GCA_000413115.1_02605 CDS open 2759339-2761114 1776_na     591_aa hypothetical protein
2606 KE332533.1 GCA_000413115.1_02606 CDS open 2761326-2763941 2616_na     871_aa hypothetical protein
2607 KE332533.1 GCA_000413115.1_02607 CDS open 2764100-2765140 1041_na     346_aa hypothetical protein
2608 KE332533.1 GCA_000413115.1_02608 CDS open 2765140-2766534 1395_na     464_aa hypothetical protein
2609 KE332533.1 GCA_000413115.1_02609 CDS open 2766547-2767524 978_na     325_aa oppD_6 Oligopeptide transport ATP-binding protein OppD
2610 KE332533.1 GCA_000413115.1_02610 CDS open 2767521-2768567 1047_na     348_aa btuD_29 Vitamin B12 import ATP-binding protein BtuD
2611 KE332533.1 GCA_000413115.1_02611 CDS open 2768670-2769896 1227_na     408_aa norV Anaerobic nitric oxide reductase flavorubredoxin
2612 KE332533.1 GCA_000413115.1_02612 CDS open 2770021-2770668 648_na     215_aa hypothetical protein
2613 KE332533.1 GCA_000413115.1_02613 CDS open 2770681-2771562 882_na     293_aa rsmA Ribosomal RNA small subunit methyltransferase A
2614 KE332533.1 GCA_000413115.1_02614 CDS open 2771583-2772092 510_na     169_aa hypothetical protein
2615 KE332533.1 GCA_000413115.1_02615 CDS open 2772079-2773113 1035_na     344_aa rluD_2 Ribosomal large subunit pseudouridine synthase D
2616 KE332533.1 GCA_000413115.1_02616 CDS open 2773107-2773892 786_na     261_aa hypothetical protein
2617 KE332533.1 GCA_000413115.1_02617 CDS open 2773825-2775177 1353_na     450_aa fpgS Folylpolyglutamate synthase
2618 KE332533.1 GCA_000413115.1_02618 CDS open 2775269-2776711 1443_na     480_aa murC UDP-N-acetylmuramate--L-alanine ligase
2619 KE332533.1 GCA_000413115.1_02619 CDS open 2776727-2777593 867_na     288_aa hypothetical protein
2620 KE332533.1 GCA_000413115.1_02620 CDS open 2777603-2778166 564_na     187_aa cmk_3 Cytidylate kinase
2621 KE332533.1 GCA_000413115.1_02621 CDS open 2778158-2778838 681_na     226_aa hypothetical protein
2622 KE332533.1 GCA_000413115.1_02622 CDS open 2778853-2779827 975_na     324_aa hypothetical protein
2623 KE332533.1 GCA_000413115.1_02623 CDS open 2780039-2781796 1758_na     585_aa thrS Threonine--tRNA ligase
2624 KE332533.1 GCA_000413115.1_02624 CDS open 2781900-2782658 759_na     252_aa hypothetical protein
2625 KE332533.1 GCA_000413115.1_02625 CDS open 2782689-2786048 3360_na     1119_aa hypothetical protein
2626 KE332533.1 GCA_000413115.1_02626 CDS open 2786307-2787011 705_na     234_aa hypothetical protein
2627 KE332533.1 GCA_000413115.1_02627 CDS open 2786998-2788575 1578_na     525_aa 1%2C4-alpha-glucan branching enzyme
2628 KE332533.1 GCA_000413115.1_02628 CDS open 2788821-2789960 1140_na     379_aa alr1 Alanine racemase 1
2629 KE332533.1 GCA_000413115.1_02629 CDS open 2789984-2790853 870_na     289_aa ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
2630 KE332533.1 GCA_000413115.1_02630 CDS open 2790981-2791715 735_na     244_aa hypothetical protein
2631 KE332533.1 GCA_000413115.1_02631 CDS open 2791719-2792627 909_na     302_aa hypothetical protein
2632 KE332533.1 GCA_000413115.1_02632 CDS open 2792726-2793136 411_na     136_aa hypothetical protein
2633 KE332533.1 GCA_000413115.1_02633 CDS open 2793146-2793637 492_na     163_aa hypothetical protein
2634 KE332533.1 GCA_000413115.1_02634 CDS open 2793872-2794102 231_na     76_aa hypothetical protein
2635 KE332533.1 GCA_000413115.1_02635 CDS open 2794175-2795248 1074_na     357_aa truB tRNA pseudouridine synthase B
2636 KE332533.1 GCA_000413115.1_02636 CDS open 2795263-2795661 399_na     132_aa rbfA 30S ribosome-binding factor
2637 KE332533.1 GCA_000413115.1_02637 CDS open 2795654-2798347 2694_na     897_aa infB Translation initiation factor IF-2
2638 KE332533.1 GCA_000413115.1_02638 CDS open 2798355-2799842 1488_na     495_aa nusA Transcription terminationantitermination protein NusA
2639 KE332533.1 GCA_000413115.1_02639 CDS open 2799878-2800324 447_na     148_aa rimP Ribosome maturation factor RimP
2640 KE332533.1 GCA_000413115.1_02640 CDS open 2800595-2801764 1170_na     389_aa ldc Lysineornithine decarboxylase
2641 KE332533.1 GCA_000413115.1_02641 CDS open 2801787-2803106 1320_na     439_aa hypothetical protein
2642 KE332533.1 GCA_000413115.1_02642 CDS open 2803145-2804374 1230_na     409_aa hypothetical protein
2643 KE332533.1 GCA_000413115.1_02643 CDS open 2804433-2805062 630_na     209_aa adk Adenylate kinase
2644 KE332533.1 GCA_000413115.1_02644 CDS open 2805194-2805715 522_na     173_aa hypothetical protein
2645 KE332533.1 GCA_000413115.1_02645 CDS open 2805699-2806370 672_na     223_aa hypothetical protein
2646 KE332533.1 GCA_000413115.1_02646 CDS open 2806504-2806812 309_na     102_aa higA-2 Antitoxin HigA-2
2647 KE332533.1 GCA_000413115.1_02647 CDS open 2806822-2807130 309_na     102_aa higB-2 Toxin HigB-2
2648 KE332533.1 GCA_000413115.1_02648 CDS open 2807346-2808725 1380_na     459_aa tpl Tyrosine phenol-lyase
2649 KE332533.1 GCA_000413115.1_02649 CDS open 2808841-2809461 621_na     206_aa hypothetical protein
2650 KE332533.1 GCA_000413115.1_02650 CDS open 2809442-2810263 822_na     273_aa hypothetical protein
2651 KE332533.1 GCA_000413115.1_02651 CDS open 2810278-2810820 543_na     180_aa hypothetical protein
2652 KE332533.1 GCA_000413115.1_02652 CDS open 2810837-2811175 339_na     112_aa rsbV Anti-sigma-B factor antagonist
2653 KE332533.1 GCA_000413115.1_02653 CDS open 2811201-2812886 1686_na     561_aa hypothetical protein
2654 KE332533.1 GCA_000413115.1_02654 CDS open 2812960-2813637 678_na     225_aa hypothetical protein
2655 KE332533.1 GCA_000413115.1_02655 CDS open 2813648-2815021 1374_na     457_aa cpoB_6 Cell division coordinator CpoB
2656 KE332533.1 GCA_000413115.1_02656 CDS open 2815059-2815799 741_na     246_aa hypothetical protein
2657 KE332533.1 GCA_000413115.1_02657 CDS open 2815792-2817969 2178_na     725_aa bepA_7 Beta-barrel assembly-enhancing protease
2658 KE332533.1 GCA_000413115.1_02658 CDS open 2818050-2819219 1170_na     389_aa hypothetical protein
2659 KE332533.1 GCA_000413115.1_02659 CDS open 2819244-2819957 714_na     237_aa hypothetical protein
2660 KE332533.1 GCA_000413115.1_02660 CDS open 2820051-2820674 624_na     207_aa trmB tRNA (guanine-N(7)-)-methyltransferase
2661 KE332533.1 GCA_000413115.1_02661 CDS open 2820930-2822015 1086_na     361_aa aroC Chorismate synthase
2662 KE332534.1 GCA_000413115.1_02662 CDS open 69-662 594_na     197_aa hypothetical protein
2663 KE332534.1 GCA_000413115.1_02663 CDS open 633-1232 600_na     199_aa hypothetical protein
2664 KE332534.1 GCA_000413115.1_02664 CDS open 1292-2101 810_na     269_aa xerD_3 Tyrosine recombinase XerD
2665 KE332535.1 GCA_000413115.1_02665 CDS open 146-643 498_na     165_aa hypothetical protein
2666 KE332535.1 GCA_000413115.1_02666 CDS open 712-1170 459_na     152_aa hypothetical protein