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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Phocaeicola abscessus (GCA_000442105.1)

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PROKKA Annotations for GCA_000442105.1
Genome Selected: Phocaeicola abscessus
ContigsBases CDSrRNA tmRNAtRNA
30 2502741 2086 1 1 46
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Annotation Table [page:5]    |    Number of Records Found: 2142 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 AUTU01000030.1 GCA_000442105.1_02001 CDS open 194944-195636 693_na     230_aa hypothetical protein
2002 AUTU01000030.1 GCA_000442105.1_02002 CDS open 195936-198962 3027_na     1008_aa susC_9 TonB-dependent receptor SusC
2003 AUTU01000030.1 GCA_000442105.1_02003 CDS open 198973-200679 1707_na     568_aa hypothetical protein
2004 AUTU01000030.1 GCA_000442105.1_02004 CDS open 200948-201313 366_na     121_aa rplS 50S ribosomal protein L19
2005 AUTU01000030.1 GCA_000442105.1_02005 CDS open 202098-202211 114_na     37_aa hypothetical protein
2006 AUTU01000030.1 GCA_000442105.1_02006 CDS open 202219-202365 147_na     48_aa hypothetical protein
2007 AUTU01000030.1 GCA_000442105.1_02007 CDS open 202793-204328 1536_na     511_aa hypothetical protein
2008 AUTU01000030.1 GCA_000442105.1_02008 CDS open 204344-207598 3255_na     1084_aa TonB-dependent receptor P26
2009 AUTU01000030.1 GCA_000442105.1_02009 CDS open 207792-207896 105_na     34_aa hypothetical protein
2010 AUTU01000030.1 GCA_000442105.1_02010 CDS open 208118-210697 2580_na     859_aa Beta-galactosidase BoGH2A
2011 AUTU01000030.1 GCA_000442105.1_02011 CDS open 210722-212257 1536_na     511_aa rny_2 Ribonuclease Y
2012 AUTU01000030.1 GCA_000442105.1_02012 CDS open 212364-212651 288_na     95_aa hypothetical protein
2013 AUTU01000030.1 GCA_000442105.1_02013 CDS open 212673-212966 294_na     97_aa hypothetical protein
2014 AUTU01000030.1 GCA_000442105.1_02014 CDS open 213123-213455 333_na     110_aa queD 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase
2015 AUTU01000030.1 GCA_000442105.1_02015 CDS open 213577-213987 411_na     136_aa queE 7-carboxy-7-deazaguanine synthase
2016 AUTU01000030.1 GCA_000442105.1_02016 CDS open 213995-214573 579_na     192_aa hypothetical protein
2017 AUTU01000030.1 GCA_000442105.1_02017 CDS open 214570-215208 639_na     212_aa hypothetical protein
2018 AUTU01000030.1 GCA_000442105.1_02018 CDS open 215980-217278 1299_na     432_aa hypothetical protein
2019 AUTU01000030.1 GCA_000442105.1_02019 CDS open 217294-219285 1992_na     663_aa dsbD Thiol:disulfide interchange protein DsbD
2020 AUTU01000030.1 tRNA open 219431-219516 tRNA-Ser(tga)
2021 AUTU01000030.1 tRNA open 219624-219697 tRNA-Phe(gaa)
2022 AUTU01000030.1 tRNA open 219829-219902 tRNA-Pro(cgg)
2023 AUTU01000030.1 GCA_000442105.1_02023 CDS open 220020-220967 948_na     315_aa cysK Cysteine synthase
2024 AUTU01000030.1 GCA_000442105.1_02024 CDS open 221094-222383 1290_na     429_aa O-acetyl-L-homoserine sulfhydrylase
2025 AUTU01000030.1 GCA_000442105.1_02025 CDS open 222414-223286 873_na     290_aa bepA_4 Beta-barrel assembly-enhancing protease
2026 AUTU01000030.1 GCA_000442105.1_02026 CDS open 223371-223679 309_na     102_aa hypothetical protein
2027 AUTU01000030.1 GCA_000442105.1_02027 CDS open 223654-224004 351_na     116_aa hypothetical protein
2028 AUTU01000030.1 GCA_000442105.1_02028 CDS open 224123-225982 1860_na     619_aa mutS_2 DNA mismatch repair protein MutS
2029 AUTU01000030.1 GCA_000442105.1_02029 CDS open 226040-227443 1404_na     467_aa phoB Alkaline phosphatase 3
2030 AUTU01000030.1 GCA_000442105.1_02030 CDS open 227833-228621 789_na     262_aa hypothetical protein
2031 AUTU01000030.1 GCA_000442105.1_02031 CDS open 228628-229722 1095_na     364_aa hypothetical protein
2032 AUTU01000030.1 GCA_000442105.1_02032 CDS open 230302-231246 945_na     314_aa hypothetical protein
2033 AUTU01000030.1 GCA_000442105.1_02033 CDS open 231314-233185 1872_na     623_aa hypothetical protein
2034 AUTU01000030.1 GCA_000442105.1_02034 CDS open 233264-233854 591_na     196_aa hypothetical protein
2035 AUTU01000030.1 GCA_000442105.1_02035 CDS open 234333-234707 375_na     124_aa hypothetical protein
2036 AUTU01000030.1 GCA_000442105.1_02036 CDS open 234720-235607 888_na     295_aa nadK NAD kinase
2037 AUTU01000030.1 GCA_000442105.1_02037 CDS open 236102-236797 696_na     231_aa tolQ_2 Tol-Pal system protein TolQ
2038 AUTU01000030.1 GCA_000442105.1_02038 CDS open 236803-237219 417_na     138_aa tolR Tol-Pal system protein TolR
2039 AUTU01000030.1 GCA_000442105.1_02039 CDS open 237225-238124 900_na     299_aa hypothetical protein
2040 AUTU01000030.1 GCA_000442105.1_02040 CDS open 238143-238691 549_na     182_aa yajL Proteinnucleic acid deglycase 3
2041 AUTU01000030.1 GCA_000442105.1_02041 CDS open 238688-239368 681_na     226_aa ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
2042 AUTU01000030.1 GCA_000442105.1_02042 CDS open 239372-241468 2097_na     698_aa recG ATP-dependent DNA helicase RecG
2043 AUTU01000030.1 GCA_000442105.1_02043 CDS open 241721-242614 894_na     297_aa hypothetical protein
2044 AUTU01000030.1 GCA_000442105.1_02044 CDS open 242724-243266 543_na     180_aa hypothetical protein
2045 AUTU01000030.1 GCA_000442105.1_02045 CDS open 243256-244575 1320_na     439_aa hypothetical protein
2046 AUTU01000030.1 GCA_000442105.1_02046 CDS open 244577-245335 759_na     252_aa tpiA Triosephosphate isomerase
2047 AUTU01000030.1 GCA_000442105.1_02047 CDS open 245408-245857 450_na     149_aa hypothetical protein
2048 AUTU01000030.1 GCA_000442105.1_02048 CDS open 245854-246453 600_na     199_aa folE GTP cyclohydrolase 1
2049 AUTU01000030.1 GCA_000442105.1_02049 CDS open 247279-248313 1035_na     344_aa hypothetical protein
2050 AUTU01000030.1 GCA_000442105.1_02050 CDS open 248350-249018 669_na     222_aa hypothetical protein
2051 AUTU01000030.1 GCA_000442105.1_02051 CDS open 249026-249913 888_na     295_aa rbbA_2 Ribosome-associated ATPase
2052 AUTU01000030.1 GCA_000442105.1_02052 CDS open 250111-250746 636_na     211_aa hypothetical protein
2053 AUTU01000030.1 GCA_000442105.1_02053 CDS open 250733-251320 588_na     195_aa hypothetical protein
2054 AUTU01000030.1 GCA_000442105.1_02054 CDS open 251376-252806 1431_na     476_aa hypothetical protein
2055 AUTU01000030.1 GCA_000442105.1_02055 CDS open 252928-254223 1296_na     431_aa hypothetical protein
2056 AUTU01000030.1 GCA_000442105.1_02056 CDS open 254254-257025 2772_na     923_aa hypothetical protein
2057 AUTU01000030.1 GCA_000442105.1_02057 CDS open 258269-258388 120_na     39_aa hypothetical protein
2058 AUTU01000030.1 GCA_000442105.1_02058 CDS open 258408-261704 3297_na     1098_aa TonB-dependent receptor P3
2059 AUTU01000030.1 GCA_000442105.1_02059 CDS open 261723-263186 1464_na     487_aa SusD-like protein P2
2060 AUTU01000030.1 GCA_000442105.1_02060 CDS open 263224-265527 2304_na     767_aa hypothetical protein
2061 AUTU01000030.1 GCA_000442105.1_02061 CDS open 265832-266119 288_na     95_aa hypothetical protein
2062 AUTU01000030.1 GCA_000442105.1_02062 CDS open 266719-269118 2400_na     799_aa hypothetical protein
2063 AUTU01000030.1 GCA_000442105.1_02063 CDS open 269128-269805 678_na     225_aa yknY_4 putative ABC transporter ATP-binding protein YknY
2064 AUTU01000030.1 GCA_000442105.1_02064 CDS open 269837-272203 2367_na     788_aa hypothetical protein
2065 AUTU01000030.1 GCA_000442105.1_02065 CDS open 272227-274578 2352_na     783_aa hypothetical protein
2066 AUTU01000030.1 GCA_000442105.1_02066 CDS open 274668-275918 1251_na     416_aa mdtA Multidrug resistance protein MdtA
2067 AUTU01000030.1 GCA_000442105.1_02067 CDS open 275931-277283 1353_na     450_aa hypothetical protein
2068 AUTU01000030.1 GCA_000442105.1_02068 CDS open 277987-279357 1371_na     456_aa algB Alginate biosynthesis transcriptional regulatory protein AlgB
2069 AUTU01000030.1 GCA_000442105.1_02069 CDS open 279347-280651 1305_na     434_aa sasA_4 Adaptive-response sensory-kinase SasA
2070 AUTU01000030.1 GCA_000442105.1_02070 CDS open 280664-281734 1071_na     356_aa mftC Putative mycofactocin radical SAM maturase MftC
2071 AUTU01000030.1 GCA_000442105.1_02071 CDS open 281758-282291 534_na     177_aa hypothetical protein
2072 AUTU01000030.1 GCA_000442105.1_02072 CDS open 282307-282507 201_na     66_aa hypothetical protein
2073 AUTU01000030.1 GCA_000442105.1_02073 CDS open 282732-284669 1938_na     645_aa hypothetical protein
2074 AUTU01000030.1 GCA_000442105.1_02074 CDS open 284685-285953 1269_na     422_aa mshA_4 D-inositol-3-phosphate glycosyltransferase
2075 AUTU01000030.1 GCA_000442105.1_02075 CDS open 285970-287367 1398_na     465_aa hypothetical protein
2076 AUTU01000030.1 GCA_000442105.1_02076 CDS open 287514-288404 891_na     296_aa hypothetical protein
2077 AUTU01000030.1 GCA_000442105.1_02077 CDS open 288465-289031 567_na     188_aa rpoE ECF RNA polymerase sigma factor RpoE
2078 AUTU01000030.1 GCA_000442105.1_02078 CDS open 289135-289404 270_na     89_aa hypothetical protein
2079 AUTU01000030.1 GCA_000442105.1_02079 CDS open 289418-289699 282_na     93_aa hypothetical protein
2080 AUTU01000030.1 GCA_000442105.1_02080 CDS open 290336-290467 132_na     43_aa hypothetical protein
2081 AUTU01000030.1 GCA_000442105.1_02081 CDS open 290511-293912 3402_na     1133_aa susC_10 TonB-dependent receptor SusC
2082 AUTU01000030.1 GCA_000442105.1_02082 CDS open 293939-295474 1536_na     511_aa SusD-like protein P25
2083 AUTU01000030.1 GCA_000442105.1_02083 CDS open 295487-296476 990_na     329_aa hypothetical protein
2084 AUTU01000030.1 GCA_000442105.1_02084 CDS open 297012-298508 1497_na     498_aa leuA_1 2-isopropylmalate synthase
2085 AUTU01000030.1 GCA_000442105.1_02085 CDS open 298513-299895 1383_na     460_aa leuC 3-isopropylmalate dehydratase large subunit
2086 AUTU01000030.1 GCA_000442105.1_02086 CDS open 299917-300519 603_na     200_aa leuD1 3-isopropylmalate dehydratase small subunit 1
2087 AUTU01000030.1 GCA_000442105.1_02087 CDS open 300492-302042 1551_na     516_aa leuA_2 2-isopropylmalate synthase
2088 AUTU01000030.1 GCA_000442105.1_02088 CDS open 302105-303166 1062_na     353_aa leuB 3-isopropylmalate dehydrogenase
2089 AUTU01000030.1 GCA_000442105.1_02089 CDS open 303172-303993 822_na     273_aa bepA_5 Beta-barrel assembly-enhancing protease
2090 AUTU01000030.1 GCA_000442105.1_02090 CDS open 304243-304704 462_na     153_aa hypothetical protein
2091 AUTU01000030.1 GCA_000442105.1_02091 CDS open 304828-306801 1974_na     657_aa hypothetical protein
2092 AUTU01000030.1 GCA_000442105.1_02092 CDS open 306802-307470 669_na     222_aa hypothetical protein
2093 AUTU01000030.1 GCA_000442105.1_02093 CDS open 307527-308003 477_na     158_aa perR Peroxide operon regulator
2094 AUTU01000030.1 GCA_000442105.1_02094 CDS open 308008-309276 1269_na     422_aa purA Adenylosuccinate synthetase
2095 AUTU01000030.1 tRNA open 309417-309490 tRNA-Met(cat)
2096 AUTU01000030.1 GCA_000442105.1_02096 CDS open 309715-310338 624_na     207_aa hypothetical protein
2097 AUTU01000030.1 GCA_000442105.1_02097 CDS open 310344-311096 753_na     250_aa fabG 3-oxoacyl-[acyl-carrier-protein] reductase FabG
2098 AUTU01000030.1 GCA_000442105.1_02098 CDS open 311104-311781 678_na     225_aa putative RNA pseudouridine synthase
2099 AUTU01000030.1 GCA_000442105.1_02099 CDS open 311784-313022 1239_na     412_aa putative zinc protease
2100 AUTU01000030.1 GCA_000442105.1_02100 CDS open 313019-313861 843_na     280_aa Putative bifunctional phosphatasepeptidyl-prolyl cis-trans isomerase
2101 AUTU01000030.1 GCA_000442105.1_02101 CDS open 314395-318990 4596_na     1531_aa hypothetical protein
2102 AUTU01000030.1 GCA_000442105.1_02102 CDS open 318990-321332 2343_na     780_aa bamA_6 Outer membrane protein assembly factor BamA
2103 AUTU01000030.1 GCA_000442105.1_02103 CDS open 321434-322351 918_na     305_aa hypothetical protein
2104 AUTU01000030.1 GCA_000442105.1_02104 CDS open 322662-323408 747_na     248_aa truA tRNA pseudouridine synthase A
2105 AUTU01000030.1 GCA_000442105.1_02105 CDS open 323405-324070 666_na     221_aa hypothetical protein
2106 AUTU01000030.1 GCA_000442105.1_02106 CDS open 324218-325255 1038_na     345_aa PhoH-like protein
2107 AUTU01000030.1 GCA_000442105.1_02107 CDS open 325283-326227 945_na     314_aa purC Phosphoribosylaminoimidazole-succinocarboxamide synthase
2108 AUTU01000030.1 GCA_000442105.1_02108 CDS open 326286-327023 738_na     245_aa ubiE Ubiquinonemenaquinone biosynthesis C-methyltransferase UbiE
2109 AUTU01000030.1 GCA_000442105.1_02109 CDS open 327039-327782 744_na     247_aa aroE Shikimate dehydrogenase (NADP(+))
2110 AUTU01000030.1 GCA_000442105.1_02110 CDS open 327805-328752 948_na     315_aa hypothetical protein
2111 AUTU01000030.1 GCA_000442105.1_02111 CDS open 328857-329753 897_na     298_aa hypothetical protein
2112 AUTU01000030.1 GCA_000442105.1_02112 CDS open 329793-330371 579_na     192_aa lemA Protein LemA
2113 AUTU01000030.1 GCA_000442105.1_02113 CDS open 330385-331461 1077_na     358_aa aroC Chorismate synthase
2114 AUTU01000030.1 GCA_000442105.1_02114 CDS open 331473-332885 1413_na     470_aa dapE_2 Succinyl-diaminopimelate desuccinylase
2115 AUTU01000030.1 GCA_000442105.1_02115 CDS open 333413-336658 3246_na     1081_aa hypothetical protein
2116 AUTU01000030.1 GCA_000442105.1_02116 CDS open 336741-337079 339_na     112_aa hypothetical protein
2117 AUTU01000030.1 GCA_000442105.1_02117 CDS open 337164-338501 1338_na     445_aa hypothetical protein
2118 AUTU01000030.1 GCA_000442105.1_02118 CDS open 338768-339655 888_na     295_aa fabD Malonyl CoA-acyl carrier protein transacylase
2119 AUTU01000030.1 GCA_000442105.1_02119 CDS open 340033-341538 1506_na     501_aa hypothetical protein
2120 AUTU01000030.1 GCA_000442105.1_02120 CDS open 341621-343057 1437_na     478_aa clsA Major cardiolipin synthase ClsA
2121 AUTU01000030.1 GCA_000442105.1_02121 CDS open 342996-343583 588_na     195_aa rsmD Ribosomal RNA small subunit methyltransferase D
2122 AUTU01000030.1 GCA_000442105.1_02122 CDS open 343574-344386 813_na     270_aa hypothetical protein
2123 AUTU01000030.1 GCA_000442105.1_02123 CDS open 344389-345075 687_na     228_aa hypothetical protein
2124 AUTU01000030.1 GCA_000442105.1_02124 CDS open 345168-346583 1416_na     471_aa recD2 ATP-dependent RecD-like DNA helicase
2125 AUTU01000030.1 GCA_000442105.1_02125 CDS open 346787-348007 1221_na     406_aa pal Peptidoglycan-associated lipoprotein
2126 AUTU01000030.1 GCA_000442105.1_02126 CDS open 348007-351075 3069_na     1022_aa hypothetical protein
2127 AUTU01000030.1 GCA_000442105.1_02127 CDS open 351541-352716 1176_na     391_aa hypothetical protein
2128 AUTU01000030.1 GCA_000442105.1_02128 CDS open 352754-356338 3585_na     1194_aa Pyruvate:ferredoxin oxidoreductase
2129 AUTU01000030.1 GCA_000442105.1_02129 CDS open 356416-356826 411_na     136_aa hypothetical protein
2130 AUTU01000030.1 GCA_000442105.1_02130 CDS open 357141-357968 828_na     275_aa glgA Glycogen synthase
2131 AUTU01000030.1 GCA_000442105.1_02131 CDS open 357987-359408 1422_na     473_aa hypothetical protein
2132 AUTU01000030.1 GCA_000442105.1_02132 CDS open 359634-361472 1839_na     612_aa mutL DNA mismatch repair protein MutL
2133 AUTU01000030.1 GCA_000442105.1_02133 CDS open 361485-361781 297_na     98_aa hypothetical protein
2134 AUTU01000030.1 GCA_000442105.1_02134 CDS open 361784-363457 1674_na     557_aa lptD_2 LPS-assembly protein LptD
2135 AUTU01000030.1 GCA_000442105.1_02135 CDS open 363454-364818 1365_na     454_aa surA_1 Chaperone SurA
2136 AUTU01000030.1 GCA_000442105.1_02136 CDS open 364811-365686 876_na     291_aa hypothetical protein
2137 AUTU01000030.1 GCA_000442105.1_02137 CDS open 365753-367108 1356_na     451_aa surA_2 Chaperone SurA
2138 AUTU01000030.1 GCA_000442105.1_02138 CDS open 367116-368594 1479_na     492_aa guaB Inosine-5-monophosphate dehydrogenase
2139 AUTU01000030.1 GCA_000442105.1_02139 CDS open 368788-369105 318_na     105_aa hypothetical protein
2140 AUTU01000030.1 GCA_000442105.1_02140 CDS open 369284-371380 2097_na     698_aa hypothetical protein
2141 AUTU01000030.1 GCA_000442105.1_02141 CDS open 371413-371535 123_na     40_aa hypothetical protein
2142 AUTU01000030.1 GCA_000442105.1_02142 CDS open 372144-373148 1005_na     334_aa xerC_8 Tyrosine recombinase XerC