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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Atopobium minutum (GCA_000468815.1)

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PROKKA Annotations for GCA_000468815.1
Genome Selected: Atopobium minutum
ContigsBases CDSrRNA tmRNAtRNA
8 1,717,627 1576 3 1 45
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Annotation Table [page:4]    |    Number of Records Found: 1634 [4 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
1501 AWUQ01000007.1 GCA_000468815.1_01501 CDS open 78784-79314 531_na     176_aa hypothetical protein
1502 AWUQ01000007.1 GCA_000468815.1_01502 CDS open 79325-80059 735_na     244_aa gph Phosphoglycolate phosphatase
1503 AWUQ01000007.1 GCA_000468815.1_01503 CDS open 80145-82169 2025_na     674_aa hypothetical protein
1504 AWUQ01000007.1 GCA_000468815.1_01504 CDS open 82367-82819 453_na     150_aa hypothetical protein
1505 AWUQ01000007.1 GCA_000468815.1_01505 CDS open 82819-84669 1851_na     616_aa putative ABC transporter ATP-binding protein
1506 AWUQ01000007.1 GCA_000468815.1_01506 CDS open 84662-86593 1932_na     643_aa putative ABC transporter ATP-binding protein
1507 AWUQ01000007.1 GCA_000468815.1_01507 CDS open 86811-87851 1041_na     346_aa rlpA Endolytic peptidoglycan transglycosylase RlpA
1508 AWUQ01000007.1 GCA_000468815.1_01508 CDS open 87873-88547 675_na     224_aa 5-nucleotidase
1509 AWUQ01000007.1 GCA_000468815.1_01509 CDS open 88635-89912 1278_na     425_aa hypothetical protein
1510 AWUQ01000007.1 GCA_000468815.1_01510 CDS open 89925-90320 396_na     131_aa hypothetical protein
1511 AWUQ01000007.1 GCA_000468815.1_01511 CDS open 90442-92220 1779_na     592_aa hypothetical protein
1512 AWUQ01000007.1 GCA_000468815.1_01512 CDS open 92220-92849 630_na     209_aa hypothetical protein
1513 AWUQ01000007.1 GCA_000468815.1_01513 CDS open 93036-94445 1410_na     469_aa Putative dipeptidase
1514 AWUQ01000007.1 GCA_000468815.1_01514 CDS open 94582-96012 1431_na     476_aa pepV_2 Beta-Ala-Xaa dipeptidase
1515 AWUQ01000007.1 GCA_000468815.1_01515 CDS open 96218-96889 672_na     223_aa Phosphorylated carbohydrates phosphatase
1516 AWUQ01000007.1 GCA_000468815.1_01516 CDS open 97098-97613 516_na     171_aa ftn Bacterial non-heme ferritin
1517 AWUQ01000007.1 GCA_000468815.1_01517 CDS open 97808-98011 204_na     67_aa cspLA Cold shock-like protein CspLA
1518 AWUQ01000007.1 GCA_000468815.1_01518 CDS open 98197-98592 396_na     131_aa hypothetical protein
1519 AWUQ01000007.1 GCA_000468815.1_01519 CDS open 98594-99655 1062_na     353_aa ruvB Holliday junction ATP-dependent DNA helicase RuvB
1520 AWUQ01000007.1 GCA_000468815.1_01520 CDS open 99656-100288 633_na     210_aa ruvA Holliday junction ATP-dependent DNA helicase RuvA
1521 AWUQ01000007.1 GCA_000468815.1_01521 CDS open 100285-100797 513_na     170_aa ruvC Crossover junction endodeoxyribonuclease RuvC
1522 AWUQ01000007.1 GCA_000468815.1_01522 CDS open 100839-102662 1824_na     607_aa nadE_2 Glutamine-dependent NAD(+) synthetase
1523 AWUQ01000007.1 GCA_000468815.1_01523 CDS open 102792-103184 393_na     130_aa dfx Desulfoferrodoxin
1524 AWUQ01000007.1 GCA_000468815.1_01524 CDS open 103476-105596 2121_na     706_aa hypothetical protein
1525 AWUQ01000007.1 GCA_000468815.1_01525 CDS open 105632-107797 2166_na     721_aa hypothetical protein
1526 AWUQ01000007.1 GCA_000468815.1_01526 CDS open 107797-109704 1908_na     635_aa yidC_2 Membrane protein insertase YidC
1527 AWUQ01000007.1 GCA_000468815.1_01527 CDS open 109790-110728 939_na     312_aa hypothetical protein
1528 AWUQ01000007.1 GCA_000468815.1_01528 CDS open 110746-112536 1791_na     596_aa thiK Thiamine kinase
1529 AWUQ01000007.1 GCA_000468815.1_01529 CDS open 112826-113254 429_na     142_aa slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD
1530 AWUQ01000007.1 GCA_000468815.1_01530 CDS open 113322-117260 3939_na     1312_aa dnaE DNA polymerase III subunit alpha
1531 AWUQ01000007.1 GCA_000468815.1_01531 CDS open 117295-120888 3594_na     1197_aa addA ATP-dependent helicasenuclease subunit A
1532 AWUQ01000007.1 GCA_000468815.1_01532 CDS open 120888-124031 3144_na     1047_aa rexB ATP-dependent helicasedeoxyribonuclease subunit B
1533 AWUQ01000007.1 GCA_000468815.1_01533 CDS open 124086-124274 189_na     62_aa hypothetical protein
1534 AWUQ01000007.1 GCA_000468815.1_01534 CDS open 124394-125797 1404_na     467_aa asnS Asparagine--tRNA ligase
1535 AWUQ01000007.1 GCA_000468815.1_01535 CDS open 125868-126539 672_na     223_aa gpmA_3 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
1536 AWUQ01000007.1 GCA_000468815.1_01536 CDS open 126493-126885 393_na     130_aa hypothetical protein
1537 AWUQ01000007.1 GCA_000468815.1_01537 CDS open 126900-128438 1539_na     512_aa gatB Aspartylglutamyl-tRNA(AsnGln) amidotransferase subunit B
1538 AWUQ01000007.1 GCA_000468815.1_01538 CDS open 128435-129931 1497_na     498_aa gatA Glutamyl-tRNA(Gln) amidotransferase subunit A
1539 AWUQ01000007.1 GCA_000468815.1_01539 CDS open 129931-130248 318_na     105_aa gatC_2 Aspartylglutamyl-tRNA(AsnGln) amidotransferase subunit C
1540 AWUQ01000007.1 GCA_000468815.1_01540 CDS open 130577-131344 768_na     255_aa sufC Vegetative protein 296
1541 AWUQ01000007.1 GCA_000468815.1_01541 CDS open 131344-132747 1404_na     467_aa hypothetical protein
1542 AWUQ01000007.1 GCA_000468815.1_01542 CDS open 132747-133874 1128_na     375_aa hypothetical protein
1543 AWUQ01000007.1 GCA_000468815.1_01543 CDS open 133882-135141 1260_na     419_aa sufS Cysteine desulfurase SufS
1544 AWUQ01000007.1 GCA_000468815.1_01544 CDS open 135134-135595 462_na     153_aa sufU Zinc-dependent sulfurtransferase SufU
1545 AWUQ01000007.1 GCA_000468815.1_01545 CDS open 135595-136041 447_na     148_aa iscR HTH-type transcriptional regulator IscR
1546 AWUQ01000007.1 GCA_000468815.1_01546 CDS open 136131-136676 546_na     181_aa hypothetical protein
1547 AWUQ01000007.1 GCA_000468815.1_01547 CDS open 136721-137467 747_na     248_aa hypothetical protein
1548 AWUQ01000007.1 GCA_000468815.1_01548 CDS open 137600-138781 1182_na     393_aa hypothetical protein
1549 AWUQ01000007.1 GCA_000468815.1_01549 CDS open 139001-139873 873_na     290_aa fba_3 Fructose-bisphosphate aldolase
1550 AWUQ01000007.1 GCA_000468815.1_01550 CDS open 140107-143823 3717_na     1238_aa purL Phosphoribosylformylglycinamidine synthase
1551 AWUQ01000007.1 GCA_000468815.1_01551 CDS open 144027-144878 852_na     283_aa ulaE_2 L-ribulose-5-phosphate 3-epimerase UlaE
1552 AWUQ01000007.1 GCA_000468815.1_01552 CDS open 144998-145708 711_na     236_aa ulaF_2 L-ribulose-5-phosphate 4-epimerase UlaF
1553 AWUQ01000007.1 GCA_000468815.1_01553 CDS open 145721-146839 1119_na     372_aa ulaG_2 putative L-ascorbate-6-phosphate lactonase UlaG
1554 AWUQ01000007.1 GCA_000468815.1_01554 CDS open 146895-147953 1059_na     352_aa hypothetical protein
1555 AWUQ01000007.1 GCA_000468815.1_01555 CDS open 147999-148310 312_na     103_aa hypothetical protein
1556 AWUQ01000007.1 GCA_000468815.1_01556 CDS open 148461-150068 1608_na     535_aa ulaA_5 Ascorbate-specific PTS system EIIC component
1557 AWUQ01000007.1 GCA_000468815.1_01557 CDS open 150199-150663 465_na     154_aa ulaC_4 Ascorbate-specific PTS system EIIA component
1558 AWUQ01000007.1 GCA_000468815.1_01558 CDS open 151043-151825 783_na     260_aa glpR Glycerol-3-phosphate regulon repressor
1559 AWUQ01000007.1 GCA_000468815.1_01559 CDS open 151843-153990 2148_na     715_aa yhgF Protein YhgF
1560 AWUQ01000007.1 GCA_000468815.1_01560 CDS open 154029-154481 453_na     150_aa hypothetical protein
1561 AWUQ01000007.1 GCA_000468815.1_01561 CDS open 154478-155653 1176_na     391_aa anmK Anhydro-N-acetylmuramic acid kinase
1562 AWUQ01000007.1 GCA_000468815.1_01562 CDS open 155647-156582 936_na     311_aa murK N-acetylmuramic acidN-acetylglucosamine kinase
1563 AWUQ01000007.1 GCA_000468815.1_01563 CDS open 156585-157679 1095_na     364_aa hypothetical protein
1564 AWUQ01000007.1 GCA_000468815.1_01564 CDS open 157850-158956 1107_na     368_aa licC_1 Lichenan permease IIC component
1565 AWUQ01000007.1 GCA_000468815.1_01565 CDS open 158953-159141 189_na     62_aa licC_2 Lichenan permease IIC component
1566 AWUQ01000007.1 GCA_000468815.1_01566 CDS open 159204-159506 303_na     100_aa ptcB PTS system galactose-specific EIIB component
1567 AWUQ01000007.1 GCA_000468815.1_01567 CDS open 159519-160364 846_na     281_aa ybbH putative HTH-type transcriptional regulator YbbH
1568 AWUQ01000007.1 GCA_000468815.1_01568 CDS open 160739-161089 351_na     116_aa chbA PTS system N%2CN-diacetylchitobiose-specific EIIA component
1569 AWUQ01000007.1 GCA_000468815.1_01569 CDS open 161123-162025 903_na     300_aa murQ N-acetylmuramic acid 6-phosphate etherase
1570 AWUQ01000007.1 GCA_000468815.1_01570 CDS open 162073-162948 876_na     291_aa hypothetical protein
1571 AWUQ01000007.1 GCA_000468815.1_01571 CDS open 163168-164016 849_na     282_aa fabG_2 3-oxoacyl-[acyl-carrier-protein] reductase FabG
1572 AWUQ01000007.1 GCA_000468815.1_01572 CDS open 164131-165354 1224_na     407_aa yhjX putative MFS-type transporter YhjX
1573 AWUQ01000007.1 GCA_000468815.1_01573 CDS open 165457-166494 1038_na     345_aa iolX scyllo-inositol 2-dehydrogenase (NAD(+))
1574 AWUQ01000007.1 GCA_000468815.1_01574 CDS open 166602-166970 369_na     122_aa crcB Putative fluoride ion transporter CrcB
1575 AWUQ01000008.1 GCA_000468815.1_01575 CDS open 14-469 456_na     151_aa deoD Purine nucleoside phosphorylase DeoD-type
1576 AWUQ01000008.1 GCA_000468815.1_01576 CDS open 543-1598 1056_na     351_aa tmpC Membrane lipoprotein TmpC
1577 AWUQ01000008.1 GCA_000468815.1_01577 CDS open 1704-3230 1527_na     508_aa rbsA Ribose import ATP-binding protein RbsA
1578 AWUQ01000008.1 GCA_000468815.1_01578 CDS open 3230-4357 1128_na     375_aa hypothetical protein
1579 AWUQ01000008.1 GCA_000468815.1_01579 CDS open 4347-5267 921_na     306_aa hypothetical protein
1580 AWUQ01000008.1 GCA_000468815.1_01580 CDS open 5374-5817 444_na     147_aa cdd Cytidine deaminase
1581 AWUQ01000008.1 GCA_000468815.1_01581 CDS open 5830-7161 1332_na     443_aa pdp Pyrimidine-nucleoside phosphorylase
1582 AWUQ01000008.1 GCA_000468815.1_01582 CDS open 7323-8231 909_na     302_aa hisK Histidinol-phosphatase
1583 AWUQ01000008.1 tRNA open 8308-8382 tRNA-Glu(ttc)
1584 AWUQ01000008.1 GCA_000468815.1_01584 CDS open 8438-9394 957_na     318_aa hypothetical protein
1585 AWUQ01000008.1 GCA_000468815.1_01585 CDS open 9395-10390 996_na     331_aa hypothetical protein
1586 AWUQ01000008.1 GCA_000468815.1_01586 CDS open 10737-11951 1215_na     404_aa adhE_2 Aldehyde-alcohol dehydrogenase
1587 AWUQ01000008.1 GCA_000468815.1_01587 CDS open 12125-12871 747_na     248_aa srlR_2 Glucitol operon repressor
1588 AWUQ01000008.1 GCA_000468815.1_01588 CDS open 13188-14168 981_na     326_aa manX_2 PTS system mannose-specific EIIAB component
1589 AWUQ01000008.1 GCA_000468815.1_01589 CDS open 14197-14997 801_na     266_aa sorA_2 PTS system sorbose-specific EIIC component
1590 AWUQ01000008.1 GCA_000468815.1_01590 CDS open 15016-15999 984_na     327_aa manZ_2 PTS system mannose-specific EIID component
1591 AWUQ01000008.1 GCA_000468815.1_01591 CDS open 16030-16467 438_na     145_aa hypothetical protein
1592 AWUQ01000008.1 GCA_000468815.1_01592 CDS open 16655-17563 909_na     302_aa bssD_2 Benzylsuccinate synthase activating enzyme
1593 AWUQ01000008.1 GCA_000468815.1_01593 CDS open 17767-20181 2415_na     804_aa cutC_3 Choline trimethylamine-lyase
1594 AWUQ01000008.1 GCA_000468815.1_01594 CDS open 20705-21769 1065_na     354_aa prfA Peptide chain release factor 1
1595 AWUQ01000008.1 GCA_000468815.1_01595 CDS open 21802-22683 882_na     293_aa prmC Release factor glutamine methyltransferase
1596 AWUQ01000008.1 GCA_000468815.1_01596 CDS open 22691-23329 639_na     212_aa ywlC Threonylcarbamoyl-AMP synthase
1597 AWUQ01000008.1 GCA_000468815.1_01597 CDS open 23435-24460 1026_na     341_aa Monoacylglycerol lipase
1598 AWUQ01000008.1 GCA_000468815.1_01598 CDS open 24712-25392 681_na     226_aa Putative threonylcarbamoyl-AMP synthase
1599 AWUQ01000008.1 GCA_000468815.1_01599 CDS open 25412-26950 1539_na     512_aa glpK Glycerol kinase
1600 AWUQ01000008.1 GCA_000468815.1_01600 CDS open 27025-27486 462_na     153_aa rpiB Ribose-5-phosphate isomerase B
1601 AWUQ01000008.1 GCA_000468815.1_01601 CDS open 27582-28226 645_na     214_aa upp Uracil phosphoribosyltransferase
1602 AWUQ01000008.1 GCA_000468815.1_01602 CDS open 28238-29581 1344_na     447_aa hypothetical protein
1603 AWUQ01000008.1 GCA_000468815.1_01603 CDS open 29660-30391 732_na     243_aa lytR_2 Sensory transduction protein LytR
1604 AWUQ01000008.1 GCA_000468815.1_01604 CDS open 30386-31849 1464_na     487_aa hypothetical protein
1605 AWUQ01000008.1 GCA_000468815.1_01605 CDS open 32234-33679 1446_na     481_aa hypothetical protein
1606 AWUQ01000008.1 GCA_000468815.1_01606 CDS open 33761-35008 1248_na     415_aa hutI_2 Imidazolonepropionase
1607 AWUQ01000008.1 GCA_000468815.1_01607 CDS open 35160-35471 312_na     103_aa hypothetical protein
1608 AWUQ01000008.1 GCA_000468815.1_01608 CDS open 35468-36268 801_na     266_aa atpB ATP synthase subunit a
1609 AWUQ01000008.1 GCA_000468815.1_01609 CDS open 36360-36554 195_na     64_aa atpE ATP synthase subunit c
1610 AWUQ01000008.1 GCA_000468815.1_01610 CDS open 36586-37182 597_na     198_aa atpF ATP synthase subunit b
1611 AWUQ01000008.1 GCA_000468815.1_01611 CDS open 37175-37645 471_na     156_aa atpD_1 ATP synthase subunit delta
1612 AWUQ01000008.1 GCA_000468815.1_01612 CDS open 37642-39291 1650_na     549_aa atpA ATP synthase subunit alpha
1613 AWUQ01000008.1 GCA_000468815.1_01613 CDS open 39301-40215 915_na     304_aa atpG ATP synthase gamma chain
1614 AWUQ01000008.1 GCA_000468815.1_01614 CDS open 40215-41699 1485_na     494_aa atpD_2 ATP synthase subunit beta
1615 AWUQ01000008.1 GCA_000468815.1_01615 CDS open 41702-42121 420_na     139_aa atpC ATP synthase epsilon chain
1616 AWUQ01000008.1 GCA_000468815.1_01616 CDS open 42155-43429 1275_na     424_aa murAA UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
1617 AWUQ01000008.1 GCA_000468815.1_01617 CDS open 43604-44041 438_na     145_aa mntR Transcriptional regulator MntR
1618 AWUQ01000008.1 GCA_000468815.1_01618 CDS open 44166-45164 999_na     332_aa hypothetical protein
1619 AWUQ01000008.1 GCA_000468815.1_01619 CDS open 45310-46200 891_na     296_aa gtaB UTP--glucose-1-phosphate uridylyltransferase
1620 AWUQ01000008.1 GCA_000468815.1_01620 CDS open 46588-51429 4842_na     1613_aa hypothetical protein
1621 AWUQ01000008.1 GCA_000468815.1_01621 CDS open 51660-52838 1179_na     392_aa sbcD Nuclease SbcCD subunit D
1622 AWUQ01000008.1 GCA_000468815.1_01622 CDS open 52839-55673 2835_na     944_aa hypothetical protein
1623 AWUQ01000008.1 GCA_000468815.1_01623 CDS open 55686-57920 2235_na     744_aa ligA DNA ligase
1624 AWUQ01000008.1 GCA_000468815.1_01624 CDS open 57921-58856 936_na     311_aa pip Proline iminopeptidase
1625 AWUQ01000008.1 GCA_000468815.1_01625 CDS open 58870-59364 495_na     164_aa hypothetical protein
1626 AWUQ01000008.1 GCA_000468815.1_01626 CDS open 59445-60275 831_na     276_aa speE_2 Polyamine aminopropyltransferase
1627 AWUQ01000008.1 GCA_000468815.1_01627 CDS open 60330-61292 963_na     320_aa hypothetical protein
1628 AWUQ01000008.1 GCA_000468815.1_01628 CDS open 61593-62084 492_na     163_aa hypothetical protein
1629 AWUQ01000008.1 GCA_000468815.1_01629 CDS open 62193-63038 846_na     281_aa DegV domain-containing protein
1630 AWUQ01000008.1 GCA_000468815.1_01630 CDS open 63111-64025 915_na     304_aa hypothetical protein
1631 AWUQ01000008.1 GCA_000468815.1_01631 CDS open 64052-64828 777_na     258_aa hypothetical protein
1632 AWUQ01000008.1 GCA_000468815.1_01632 CDS open 65106-65351 246_na     81_aa hypothetical protein
1633 AWUQ01000008.1 GCA_000468815.1_01633 CDS open 65402-66172 771_na     256_aa yaaA Peroxide stress resistance protein YaaA
1634 AWUQ01000008.1 GCA_000468815.1_01634 CDS open 66391-69252 2862_na     953_aa ppc Phosphoenolpyruvate carboxylase