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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Streptococcus pseudopneumoniae (GCA_000506745.1)

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PROKKA Annotations for GCA_000506745.1
Genome Selected: Streptococcus pseudopneumoniae
ContigsBases CDSrRNA tmRNAtRNA
122 2122333 2052 3 1 45
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Annotation Table [page:5]    |    Number of Records Found: 2168 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 AYRQ01000051.1 GCA_000506745.1_02001 CDS open 1883-3211 1329_na     442_aa purA Adenylosuccinate synthetase
2002 AYRQ01000051.1 misc_RNA open 3258-3355 csRNA
2003 AYRQ01000051.1 GCA_000506745.1_02003 CDS open 3412-3879 468_na     155_aa tadA_2 tRNA-specific adenosine deaminase
2004 AYRQ01000051.1 misc_RNA open 3912-4009 Bacteria_small_SRP
2005 AYRQ01000051.1 GCA_000506745.1_02005 CDS open 4066-4509 444_na     147_aa dut Deoxyuridine 5-triphosphate nucleotidohydrolase
2006 AYRQ01000051.1 GCA_000506745.1_02006 CDS open 4469-5026 558_na     185_aa hypothetical protein
2007 AYRQ01000051.1 GCA_000506745.1_02007 CDS open 5178-6401 1224_na     407_aa radA DNA repair protein RadA
2008 AYRQ01000051.1 GCA_000506745.1_02008 CDS open 6474-6971 498_na     165_aa mtcA1 Beta-carbonic anhydrase 1
2009 AYRQ01000051.1 GCA_000506745.1_02009 CDS open 6996-7811 816_na     271_aa hypothetical protein
2010 AYRQ01000051.1 GCA_000506745.1_02010 CDS open 7956-8924 969_na     322_aa prs Ribose-phosphate pyrophosphokinase
2011 AYRQ01000051.1 GCA_000506745.1_02011 CDS open 9165-9551 387_na     128_aa IS630 family transposase IS630-Spn1
2012 AYRQ01000051.1 GCA_000506745.1_02012 CDS open 9499-9867 369_na     122_aa IS630 family transposase IS630-Spn1
2013 AYRQ01000051.1 GCA_000506745.1_02013 CDS open 9941-10114 174_na     57_aa hypothetical protein
2014 AYRQ01000051.1 GCA_000506745.1_02014 CDS open 10619-10912 294_na     97_aa hypothetical protein
2015 AYRQ01000052.1 GCA_000506745.1_02015 CDS open 164-493 330_na     109_aa hypothetical protein
2016 AYRQ01000052.1 GCA_000506745.1_02016 CDS open 493-1008 516_na     171_aa IS3 family transposase ISSpn11
2017 AYRQ01000052.1 GCA_000506745.1_02017 CDS open 1155-2147 993_na     330_aa hypothetical protein
2018 AYRQ01000052.1 GCA_000506745.1_02018 CDS open 2165-3493 1329_na     442_aa hypothetical protein
2019 AYRQ01000052.1 GCA_000506745.1_02019 CDS open 3635-4075 441_na     146_aa hypothetical protein
2020 AYRQ01000052.1 GCA_000506745.1_02020 CDS open 4089-4298 210_na     69_aa hypothetical protein
2021 AYRQ01000052.1 GCA_000506745.1_02021 CDS open 4299-4931 633_na     210_aa liaR Transcriptional regulatory protein LiaR
2022 AYRQ01000052.1 GCA_000506745.1_02022 CDS open 4945-5940 996_na     331_aa hypothetical protein
2023 AYRQ01000052.1 GCA_000506745.1_02023 CDS open 5937-6635 699_na     232_aa liaF Protein LiaF
2024 AYRQ01000052.1 GCA_000506745.1_02024 CDS open 6712-7722 1011_na     336_aa fni Isopentenyl-diphosphate delta-isomerase
2025 AYRQ01000052.1 GCA_000506745.1_02025 CDS open 7706-8713 1008_na     335_aa Phosphomevalonate kinase
2026 AYRQ01000052.1 GCA_000506745.1_02026 CDS open 8700-9653 954_na     317_aa hypothetical protein
2027 AYRQ01000052.1 GCA_000506745.1_02027 CDS open 9635-10513 879_na     292_aa galK_2 Galactokinase
2028 AYRQ01000053.1 GCA_000506745.1_02028 CDS open 2456-3316 861_na     286_aa tehB putative S-adenosyl-L-methionine-dependent methyltransferase TehB
2029 AYRQ01000053.1 GCA_000506745.1_02029 CDS open 3332-3799 468_na     155_aa smpB SsrA-binding protein
2030 AYRQ01000053.1 GCA_000506745.1_02030 CDS open 3762-6116 2355_na     784_aa rnr Ribonuclease R
2031 AYRQ01000053.1 GCA_000506745.1_02031 CDS open 6378-6611 234_na     77_aa secG putative protein-export membrane protein SecG
2032 AYRQ01000053.1 GCA_000506745.1_02032 CDS open 6837-7457 621_na     206_aa IS5 family transposase ISSpn7
2033 AYRQ01000053.1 GCA_000506745.1_02033 CDS open 7435-7638 204_na     67_aa hypothetical protein
2034 AYRQ01000053.1 GCA_000506745.1_02034 CDS open 7683-9002 1320_na     439_aa hypothetical protein
2035 AYRQ01000053.1 GCA_000506745.1_02035 CDS open 9328-9939 612_na     203_aa def_2 Peptide deformylase
2036 AYRQ01000053.1 GCA_000506745.1_02036 CDS open 9951-10712 762_na     253_aa Putative TrmH family tRNArRNA methyltransferase
2037 AYRQ01000054.1 GCA_000506745.1_02037 CDS open 163-1278 1116_na     371_aa hypothetical protein
2038 AYRQ01000054.1 GCA_000506745.1_02038 CDS open 1308-2519 1212_na     403_aa hypothetical protein
2039 AYRQ01000054.1 GCA_000506745.1_02039 CDS open 2678-4240 1563_na     520_aa guaA GMP synthase [glutamine-hydrolyzing]
2040 AYRQ01000054.1 GCA_000506745.1_02040 CDS open 4381-5079 699_na     232_aa nagR HTH-type transcriptional repressor NagR
2041 AYRQ01000054.1 GCA_000506745.1_02041 CDS open 5226-6122 897_na     298_aa yicL_2 putative inner membrane transporter YicL
2042 AYRQ01000054.1 GCA_000506745.1_02042 CDS open 6131-7066 936_na     311_aa yfeW Putative D-alanyl-D-alanine carboxypeptidase
2043 AYRQ01000054.1 GCA_000506745.1_02043 CDS open 7063-7788 726_na     241_aa hypothetical protein
2044 AYRQ01000054.1 GCA_000506745.1_02044 CDS open 7872-8132 261_na     86_aa hypothetical protein
2045 AYRQ01000054.1 GCA_000506745.1_02045 CDS open 8508-9335 828_na     275_aa ybiV Sugar phosphatase YbiV
2046 AYRQ01000054.1 GCA_000506745.1_02046 CDS open 9575-9862 288_na     95_aa IS5 family transposase ISSpn7
2047 AYRQ01000055.1 misc_RNA open 334-399 Intron_gpII
2048 AYRQ01000055.1 GCA_000506745.1_02048 CDS open 1249-4524 3276_na     1091_aa rexB ATP-dependent helicasedeoxyribonuclease subunit B
2049 AYRQ01000055.1 GCA_000506745.1_02049 CDS open 4521-8171 3651_na     1216_aa addA ATP-dependent helicasenuclease subunit A
2050 AYRQ01000055.1 GCA_000506745.1_02050 CDS open 8348-9526 1179_na     392_aa hypothetical protein
2051 AYRQ01000056.1 GCA_000506745.1_02051 CDS open 3863-4258 396_na     131_aa hypothetical protein
2052 AYRQ01000056.1 GCA_000506745.1_02052 CDS open 4274-4657 384_na     127_aa hypothetical protein
2053 AYRQ01000056.1 GCA_000506745.1_02053 CDS open 4658-5446 789_na     262_aa lgt Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase
2054 AYRQ01000056.1 GCA_000506745.1_02054 CDS open 5439-6374 936_na     311_aa hprK HPr kinasephosphorylase
2055 AYRQ01000056.1 GCA_000506745.1_02055 CDS open 6655-6831 177_na     58_aa rpsU 30S ribosomal protein S21
2056 AYRQ01000056.1 GCA_000506745.1_02056 CDS open 6970-7677 708_na     235_aa nagB Glucosamine-6-phosphate deaminase
2057 AYRQ01000056.1 GCA_000506745.1_02057 CDS open 7828-8856 1029_na     342_aa queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase
2058 AYRQ01000056.1 misc_RNA open 9214-9324 Srn266
2059 AYRQ01000057.1 GCA_000506745.1_02059 CDS open 1533-2084 552_na     183_aa hypothetical protein
2060 AYRQ01000057.1 GCA_000506745.1_02060 CDS open 2434-3258 825_na     274_aa nadE NH(3)-dependent NAD(+) synthetase
2061 AYRQ01000057.1 GCA_000506745.1_02061 CDS open 3255-4715 1461_na     486_aa pncB2 Nicotinate phosphoribosyltransferase pncB2
2062 AYRQ01000057.1 GCA_000506745.1_02062 CDS open 4821-5309 489_na     162_aa hypothetical protein
2063 AYRQ01000057.1 GCA_000506745.1_02063 CDS open 5299-5508 210_na     69_aa hypothetical protein
2064 AYRQ01000057.1 GCA_000506745.1_02064 CDS open 6113-6340 228_na     75_aa hypothetical protein
2065 AYRQ01000057.1 GCA_000506745.1_02065 CDS open 6404-6616 213_na     70_aa hypothetical protein
2066 AYRQ01000057.1 GCA_000506745.1_02066 CDS open 6691-7476 786_na     261_aa btuD_6 Vitamin B12 import ATP-binding protein BtuD
2067 AYRQ01000057.1 GCA_000506745.1_02067 CDS open 7861-9147 1287_na     428_aa hypothetical protein
2068 AYRQ01000058.1 GCA_000506745.1_02068 CDS open 769-1401 633_na     210_aa yknY_4 putative ABC transporter ATP-binding protein YknY
2069 AYRQ01000058.1 GCA_000506745.1_02069 CDS open 1403-3418 2016_na     671_aa hypothetical protein
2070 AYRQ01000058.1 GCA_000506745.1_02070 CDS open 3521-3817 297_na     98_aa hypothetical protein
2071 AYRQ01000058.1 GCA_000506745.1_02071 CDS open 4433-5074 642_na     213_aa yxdL_3 ABC transporter ATP-binding protein YxdL
2072 AYRQ01000058.1 GCA_000506745.1_02072 CDS open 5079-7280 2202_na     733_aa hypothetical protein
2073 AYRQ01000058.1 GCA_000506745.1_02073 CDS open 7287-7580 294_na     97_aa hypothetical protein
2074 AYRQ01000058.1 GCA_000506745.1_02074 CDS open 7745-7915 171_na     56_aa hypothetical protein
2075 AYRQ01000059.1 GCA_000506745.1_02075 CDS open 268-1446 1179_na     392_aa hypothetical protein
2076 AYRQ01000059.1 GCA_000506745.1_02076 CDS open 1615-2232 618_na     205_aa gph_3 Phosphoglycolate phosphatase
2077 AYRQ01000059.1 GCA_000506745.1_02077 CDS open 2236-3516 1281_na     426_aa yeeO putative FMNFAD exporter YeeO
2078 AYRQ01000059.1 GCA_000506745.1_02078 CDS open 3577-5061 1485_na     494_aa thrC Threonine synthase
2079 AYRQ01000059.1 GCA_000506745.1_02079 CDS open 5137-6414 1278_na     425_aa hypothetical protein
2080 AYRQ01000059.1 tRNA open 6521-6606 tRNA-Leu(caa)
2081 AYRQ01000059.1 tRNA open 6614-6687 tRNA-Gln(ttg)
2082 AYRQ01000059.1 tRNA open 6699-6773 tRNA-His(gtg)
2083 AYRQ01000059.1 tRNA open 6786-6858 tRNA-Trp(cca)
2084 AYRQ01000059.1 tRNA open 6861-6943 tRNA-Tyr(gta)
2085 AYRQ01000059.1 tRNA open 6955-7027 tRNA-Phe(gaa)
2086 AYRQ01000059.1 tRNA open 7031-7104 tRNA-Met(cat)
2087 AYRQ01000059.1 tRNA open 7115-7204 tRNA-Ser(tga)
2088 AYRQ01000059.1 tRNA open 7286-7361 tRNA-Ile(gat)
2089 AYRQ01000059.1 tRNA open 7394-7466 tRNA-Gly(tcc)
2090 AYRQ01000060.1 GCA_000506745.1_02090 CDS open 317-1126 810_na     269_aa yidA_2 Sugar phosphatase YidA
2091 AYRQ01000060.1 GCA_000506745.1_02091 CDS open 1397-1618 222_na     73_aa hypothetical protein
2092 AYRQ01000060.1 GCA_000506745.1_02092 CDS open 1660-2331 672_na     223_aa hypothetical protein
2093 AYRQ01000060.1 GCA_000506745.1_02093 CDS open 2573-3481 909_na     302_aa hypothetical protein
2094 AYRQ01000060.1 GCA_000506745.1_02094 CDS open 3478-3939 462_na     153_aa lspA Lipoprotein signal peptidase
2095 AYRQ01000060.1 GCA_000506745.1_02095 CDS open 3929-4816 888_na     295_aa rluD_2 Ribosomal large subunit pseudouridine synthase D
2096 AYRQ01000060.1 GCA_000506745.1_02096 CDS open 4819-6702 1884_na     627_aa hypothetical protein
2097 AYRQ01000061.1 GCA_000506745.1_02097 CDS open 218-370 153_na     50_aa hypothetical protein
2098 AYRQ01000061.1 GCA_000506745.1_02098 CDS open 840-5633 4794_na     1597_aa hypothetical protein
2099 AYRQ01000062.1 GCA_000506745.1_02099 CDS open 250-1260 1011_na     336_aa ccpA_2 Catabolite control protein A
2100 AYRQ01000062.1 GCA_000506745.1_02100 CDS open 1579-2178 600_na     199_aa desR Transcriptional regulatory protein DesR
2101 AYRQ01000062.1 GCA_000506745.1_02101 CDS open 2180-3277 1098_na     365_aa desK Sensor histidine kinase DesK
2102 AYRQ01000062.1 GCA_000506745.1_02102 CDS open 3277-4014 738_na     245_aa hypothetical protein
2103 AYRQ01000062.1 GCA_000506745.1_02103 CDS open 4016-4900 885_na     294_aa btuD_7 Vitamin B12 import ATP-binding protein BtuD
2104 AYRQ01000062.1 GCA_000506745.1_02104 CDS open 4887-5081 195_na     64_aa hypothetical protein
2105 AYRQ01000062.1 GCA_000506745.1_02105 CDS open 5078-5284 207_na     68_aa hypothetical protein
2106 AYRQ01000062.1 tRNA open 5888-5963 tRNA-Pro(tgg)
2107 AYRQ01000062.1 tRNA open 5978-6051 tRNA-Arg(acg)
2108 AYRQ01000062.1 tRNA open 6063-6147 tRNA-Leu(taa)
2109 AYRQ01000063.1 GCA_000506745.1_02109 CDS open 4075-4209 135_na     44_aa rpmH 50S ribosomal protein L34
2110 AYRQ01000063.1 GCA_000506745.1_02110 CDS open 4354-5568 1215_na     404_aa alaA Glutamate-pyruvate aminotransferase AlaA
2111 AYRQ01000063.1 GCA_000506745.1_02111 CDS open 5725-6024 300_na     99_aa hypothetical protein
2112 AYRQ01000064.1 rRNA open 170-1711 16S ribosomal RNA
2113 AYRQ01000064.1 tRNA open 1763-1837 tRNA-Ala(tgc)
2114 AYRQ01000064.1 rRNA open 1964-4860 23S ribosomal RNA
2115 AYRQ01000064.1 rRNA open 4943-5052 5S ribosomal RNA
2116 AYRQ01000065.1 GCA_000506745.1_02116 CDS open 84-347 264_na     87_aa hypothetical protein
2117 AYRQ01000065.1 GCA_000506745.1_02117 CDS open 735-1928 1194_na     397_aa hypothetical protein
2118 AYRQ01000065.1 GCA_000506745.1_02118 CDS open 2807-3598 792_na     263_aa hypothetical protein
2119 AYRQ01000065.1 GCA_000506745.1_02119 CDS open 3709-4377 669_na     222_aa aqpZ2 Aquaporin Z 2
2120 AYRQ01000065.1 misc_RNA open 4541-4747 group-II-D1D4-3
2121 AYRQ01000066.1 GCA_000506745.1_02121 CDS open 131-4681 4551_na     1516_aa iga Immunoglobulin A1 protease
2122 AYRQ01000067.1 GCA_000506745.1_02122 CDS open 216-593 378_na     125_aa hypothetical protein
2123 AYRQ01000067.1 GCA_000506745.1_02123 CDS open 583-807 225_na     74_aa purB_2 Adenylosuccinate lyase
2124 AYRQ01000068.1 GCA_000506745.1_02124 CDS open 2854-3597 744_na     247_aa hypothetical protein
2125 AYRQ01000069.1 GCA_000506745.1_02125 CDS open 237-1199 963_na     320_aa ansB L-asparaginase 2
2126 AYRQ01000069.1 GCA_000506745.1_02126 CDS open 1265-2656 1392_na     463_aa cof HMP-PP phosphatase
2127 AYRQ01000069.1 GCA_000506745.1_02127 CDS open 2653-2811 159_na     52_aa hypothetical protein
2128 AYRQ01000069.1 GCA_000506745.1_02128 CDS open 2884-3336 453_na     150_aa Putative universal stress protein
2129 AYRQ01000070.1 tRNA open 1-85 tRNA-Leu(taa)
2130 AYRQ01000070.1 tRNA open 97-170 tRNA-Arg(acg)
2131 AYRQ01000070.1 tRNA open 185-260 tRNA-Pro(tgg)
2132 AYRQ01000070.1 tRNA open 264-339 tRNA-Met(cat)
2133 AYRQ01000070.1 tRNA open 352-425 tRNA-Met(cat)
2134 AYRQ01000070.1 tRNA open 436-525 tRNA-Ser(tga)
2135 AYRQ01000070.1 tRNA open 536-609 tRNA-Met(cat)
2136 AYRQ01000070.1 tRNA open 613-685 tRNA-Phe(gaa)
2137 AYRQ01000070.1 tRNA open 705-775 tRNA-Gly(tcc)
2138 AYRQ01000070.1 tRNA open 810-885 tRNA-Ile(gat)
2139 AYRQ01000070.1 tRNA open 890-979 tRNA-Ser(gct)
2140 AYRQ01000070.1 GCA_000506745.1_02140 CDS open 1206-2141 936_na     311_aa birA Bifunctional ligaserepressor BirA
2141 AYRQ01000070.1 GCA_000506745.1_02141 CDS open 2871-3311 441_na     146_aa IS630 family transposase IS630-Spn1
2142 AYRQ01000071.1 GCA_000506745.1_02142 CDS open 106-342 237_na     78_aa hypothetical protein
2143 AYRQ01000071.1 GCA_000506745.1_02143 CDS open 339-752 414_na     137_aa hypothetical protein
2144 AYRQ01000071.1 GCA_000506745.1_02144 CDS open 870-1835 966_na     321_aa xerC_3 Tyrosine recombinase XerC
2145 AYRQ01000072.1 GCA_000506745.1_02145 CDS open 208-2085 1878_na     625_aa hypothetical protein
2146 AYRQ01000073.1 GCA_000506745.1_02146 CDS open 62-550 489_na     162_aa hypothetical protein
2147 AYRQ01000073.1 GCA_000506745.1_02147 CDS open 607-1404 798_na     265_aa xerC_4 Tyrosine recombinase XerC
2148 AYRQ01000073.1 GCA_000506745.1_02148 CDS open 1475-2020 546_na     181_aa hypothetical protein
2149 AYRQ01000075.1 GCA_000506745.1_02149 CDS open 274-480 207_na     68_aa hypothetical protein
2150 AYRQ01000075.1 GCA_000506745.1_02150 CDS open 535-885 351_na     116_aa hypothetical protein
2151 AYRQ01000075.1 GCA_000506745.1_02151 CDS open 866-1051 186_na     61_aa hypothetical protein
2152 AYRQ01000078.1 GCA_000506745.1_02152 CDS open 10-381 372_na     123_aa ISL3 family transposase IS1167
2153 AYRQ01000082.1 tRNA open 86-159 tRNA-Glu(ttc)
2154 AYRQ01000083.1 GCA_000506745.1_02154 CDS open 90-311 222_na     73_aa bglH_2 Aryl-phospho-beta-D-glucosidase BglH
2155 AYRQ01000083.1 GCA_000506745.1_02155 CDS open 336-602 267_na     88_aa IS630 family transposase ISSpn2
2156 AYRQ01000084.1 GCA_000506745.1_02156 CDS open 286-552 267_na     88_aa IS630 family transposase ISSpn2
2157 AYRQ01000085.1 GCA_000506745.1_02157 CDS open 227-622 396_na     131_aa IS630 family transposase ISSpn2
2158 AYRQ01000088.1 GCA_000506745.1_02158 CDS open 275-481 207_na     68_aa hypothetical protein
2159 AYRQ01000089.1 GCA_000506745.1_02159 CDS open 295-480 186_na     61_aa hypothetical protein
2160 AYRQ01000093.1 GCA_000506745.1_02160 CDS open 79-471 393_na     130_aa IS66 family transposase ISEbi1
2161 AYRQ01000097.1 GCA_000506745.1_02161 CDS open 21-443 423_na     140_aa IS1634 family transposase ISSeq4
2162 AYRQ01000098.1 tRNA open 9-80 tRNA-Gly(gcc)
2163 AYRQ01000098.1 tRNA open 103-175 tRNA-Thr(tgt)
2164 AYRQ01000098.1 tRNA open 193-276 tRNA-Leu(tag)
2165 AYRQ01000098.1 tRNA open 281-353 tRNA-Lys(ttt)
2166 AYRQ01000098.1 tRNA open 378-450 tRNA-Asp(gtc)
2167 AYRQ01000110.1 GCA_000506745.1_02167 CDS open 14-223 210_na     69_aa IS200IS605 family transposase ISSsu4
2168 AYRQ01000121.1 tRNA open 54-127 tRNA-Glu(ttc)