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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Bifidobacterium scardovii (GCA_000741405.1)

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PROKKA Annotations for GCA_000741405.1
Genome Selected: Bifidobacterium scardovii
ContigsBases CDSrRNA tmRNAtRNA
34 3141793 2531 3 1 57
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Annotation Table [page:6]    |    Number of Records Found: 2605 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JGZO01000034.1 GCA_000741405.1_02501 CDS open 142286-142438 153_na     50_aa hypothetical protein
2502 JGZO01000034.1 GCA_000741405.1_02502 CDS open 142538-144244 1707_na     568_aa hypothetical protein
2503 JGZO01000034.1 GCA_000741405.1_02503 CDS open 144440-146821 2382_na     793_aa Extracellular exo-alpha-L-arabinofuranosidase
2504 JGZO01000034.1 GCA_000741405.1_02504 CDS open 146887-148296 1410_na     469_aa hypothetical protein
2505 JGZO01000034.1 GCA_000741405.1_02505 CDS open 148656-149834 1179_na     392_aa ccpA_11 Catabolite control protein A
2506 JGZO01000034.1 GCA_000741405.1_02506 CDS open 149902-152412 2511_na     836_aa Alpha-L-rhamnosidase
2507 JGZO01000034.1 GCA_000741405.1_02507 CDS open 152644-153696 1053_na     350_aa hypothetical protein
2508 JGZO01000034.1 GCA_000741405.1_02508 CDS open 153954-155525 1572_na     523_aa abfB Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
2509 JGZO01000034.1 GCA_000741405.1_02509 CDS open 155588-156718 1131_na     376_aa ccpA_12 Catabolite control protein A
2510 JGZO01000034.1 GCA_000741405.1_02510 CDS open 156890-159031 2142_na     713_aa hypothetical protein
2511 JGZO01000034.1 GCA_000741405.1_02511 CDS open 159240-160379 1140_na     379_aa hypothetical protein
2512 JGZO01000034.1 GCA_000741405.1_02512 CDS open 160430-161518 1089_na     362_aa hypothetical protein
2513 JGZO01000034.1 GCA_000741405.1_02513 CDS open 161684-162649 966_na     321_aa lacG_2 Lactose transport system permease protein LacG
2514 JGZO01000034.1 GCA_000741405.1_02514 CDS open 162662-163561 900_na     299_aa yteP_2 putative multiple-sugar transport system permease YteP
2515 JGZO01000034.1 GCA_000741405.1_02515 CDS open 163743-165356 1614_na     537_aa hypothetical protein
2516 JGZO01000034.1 GCA_000741405.1_02516 CDS open 165712-166758 1047_na     348_aa ccpA_13 Catabolite control protein A
2517 JGZO01000034.1 GCA_000741405.1_02517 CDS open 166841-167926 1086_na     361_aa ccpA_14 Catabolite control protein A
2518 JGZO01000034.1 GCA_000741405.1_02518 CDS open 167988-171257 3270_na     1089_aa hypothetical protein
2519 JGZO01000034.1 GCA_000741405.1_02519 CDS open 171406-172125 720_na     239_aa hypothetical protein
2520 JGZO01000034.1 GCA_000741405.1_02520 CDS open 172321-173076 756_na     251_aa hypothetical protein
2521 JGZO01000034.1 GCA_000741405.1_02521 CDS open 173316-174254 939_na     312_aa rhaR_6 HTH-type transcriptional activator RhaR
2522 JGZO01000034.1 GCA_000741405.1_02522 CDS open 174453-176609 2157_na     718_aa hypBA1_2 Non-reducing end beta-L-arabinofuranosidase
2523 JGZO01000034.1 GCA_000741405.1_02523 CDS open 176818-179037 2220_na     739_aa agaA_6 Alpha-galactosidase AgaA
2524 JGZO01000034.1 GCA_000741405.1_02524 CDS open 179240-181048 1809_na     602_aa putative ABC transporter ATP-binding protein
2525 JGZO01000034.1 GCA_000741405.1_02525 CDS open 181148-182989 1842_na     613_aa putative ABC transporter ATP-binding protein
2526 JGZO01000034.1 GCA_000741405.1_02526 CDS open 183466-184125 660_na     219_aa hypothetical protein
2527 JGZO01000034.1 GCA_000741405.1_02527 CDS open 184549-184752 204_na     67_aa hypothetical protein
2528 JGZO01000034.1 GCA_000741405.1_02528 CDS open 185641-187170 1530_na     509_aa xylT D-xylose transporter
2529 JGZO01000034.1 GCA_000741405.1_02529 CDS open 187827-189689 1863_na     620_aa metG Methionine--tRNA ligase
2530 JGZO01000034.1 GCA_000741405.1_02530 CDS open 189849-190628 780_na     259_aa hypothetical protein
2531 JGZO01000034.1 GCA_000741405.1_02531 CDS open 190750-191250 501_na     166_aa hypothetical protein
2532 JGZO01000034.1 GCA_000741405.1_02532 CDS open 191252-192190 939_na     312_aa rsmI Ribosomal RNA small subunit methyltransferase I
2533 JGZO01000034.1 GCA_000741405.1_02533 CDS open 192253-194424 2172_na     723_aa Beta-xylosidase
2534 JGZO01000034.1 GCA_000741405.1_02534 CDS open 194505-197993 3489_na     1162_aa 1%2C2-beta-oligoglucan phosphorylase
2535 JGZO01000034.1 GCA_000741405.1_02535 CDS open 198135-199106 972_na     323_aa menH_3 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase
2536 JGZO01000034.1 GCA_000741405.1_02536 CDS open 199087-200760 1674_na     557_aa gsiA_2 Glutathione import ATP-binding protein GsiA
2537 JGZO01000034.1 GCA_000741405.1_02537 CDS open 200763-201713 951_na     316_aa hypothetical protein
2538 JGZO01000034.1 GCA_000741405.1_02538 CDS open 201719-202699 981_na     326_aa dppB_2 Dipeptide transport system permease protein DppB
2539 JGZO01000034.1 GCA_000741405.1_02539 CDS open 202799-204454 1656_na     551_aa appA Oligopeptide-binding protein AppA
2540 JGZO01000034.1 GCA_000741405.1_02540 CDS open 204757-205890 1134_na     377_aa ccpA_15 Catabolite control protein A
2541 JGZO01000034.1 GCA_000741405.1_02541 CDS open 206158-206982 825_na     274_aa hypothetical protein
2542 JGZO01000034.1 GCA_000741405.1_02542 CDS open 207103-207801 699_na     232_aa dedA Protein DedA
2543 JGZO01000034.1 GCA_000741405.1_02543 CDS open 208312-210369 2058_na     685_aa hypothetical protein
2544 JGZO01000034.1 GCA_000741405.1_02544 CDS open 210451-211332 882_na     293_aa araQ_16 L-arabinose transport system permease protein AraQ
2545 JGZO01000034.1 GCA_000741405.1_02545 CDS open 211334-212566 1233_na     410_aa lacF_16 Lactose transport system permease protein LacF
2546 JGZO01000034.1 GCA_000741405.1_02546 CDS open 212704-213960 1257_na     418_aa dasA_2 Diacetylchitobiose binding protein DasA
2547 JGZO01000034.1 GCA_000741405.1_02547 CDS open 214385-215395 1011_na     336_aa malR HTH-type transcriptional regulator MalR
2548 JGZO01000034.1 GCA_000741405.1_02548 CDS open 215493-216476 984_na     327_aa gpr_3 L-glyceraldehyde 3-phosphate reductase
2549 JGZO01000034.1 tRNA open 216637-216710 tRNA-Ala(cgc)
2550 JGZO01000034.1 GCA_000741405.1_02550 CDS open 216862-218925 2064_na     687_aa hypothetical protein
2551 JGZO01000034.1 GCA_000741405.1_02551 CDS open 219102-221522 2421_na     806_aa yicI_2 Alpha-xylosidase
2552 JGZO01000034.1 GCA_000741405.1_02552 CDS open 221637-222509 873_na     290_aa lacG_3 Lactose transport system permease protein LacG
2553 JGZO01000034.1 GCA_000741405.1_02553 CDS open 222516-223361 846_na     281_aa melD_6 Melibioseraffinosestachyose import permease protein MelD
2554 JGZO01000034.1 GCA_000741405.1_02554 CDS open 223584-224888 1305_na     434_aa hypothetical protein
2555 JGZO01000034.1 GCA_000741405.1_02555 CDS open 225087-226106 1020_na     339_aa ccpA_16 Catabolite control protein A
2556 JGZO01000034.1 GCA_000741405.1_02556 CDS open 226351-227439 1089_na     362_aa araR Arabinose metabolism transcriptional repressor
2557 JGZO01000034.1 GCA_000741405.1_02557 CDS open 227486-228577 1092_na     363_aa hypothetical protein
2558 JGZO01000034.1 GCA_000741405.1_02558 CDS open 228577-229845 1269_na     422_aa araN_2 putative arabinose-binding protein
2559 JGZO01000034.1 GCA_000741405.1_02559 CDS open 230015-230911 897_na     298_aa araQ_17 L-arabinose transport system permease protein AraQ
2560 JGZO01000034.1 GCA_000741405.1_02560 CDS open 230908-231864 957_na     318_aa melD_7 Melibioseraffinosestachyose import permease protein MelD
2561 JGZO01000034.1 GCA_000741405.1_02561 CDS open 232194-232874 681_na     226_aa vldH Validoxylamine A 7-phosphate phosphatase
2562 JGZO01000034.1 GCA_000741405.1_02562 CDS open 233114-233668 555_na     184_aa hypothetical protein
2563 JGZO01000034.1 GCA_000741405.1_02563 CDS open 233839-234870 1032_na     343_aa cbpA Curved DNA-binding protein
2564 JGZO01000034.1 GCA_000741405.1_02564 CDS open 234955-235638 684_na     227_aa grpE Protein GrpE
2565 JGZO01000034.1 GCA_000741405.1_02565 CDS open 235641-237524 1884_na     627_aa dnaK Chaperone protein DnaK
2566 JGZO01000034.1 GCA_000741405.1_02566 CDS open 237877-239976 2100_na     699_aa hypothetical protein
2567 JGZO01000034.1 GCA_000741405.1_02567 CDS open 240651-241661 1011_na     336_aa cytR_10 HTH-type transcriptional repressor CytR
2568 JGZO01000034.1 GCA_000741405.1_02568 CDS open 242168-243541 1374_na     457_aa hypothetical protein
2569 JGZO01000034.1 GCA_000741405.1_02569 CDS open 243582-244214 633_na     210_aa hypothetical protein
2570 JGZO01000034.1 GCA_000741405.1_02570 CDS open 244246-244962 717_na     238_aa degA_4 HTH-type transcriptional regulator DegA
2571 JGZO01000034.1 GCA_000741405.1_02571 CDS open 244917-245270 354_na     117_aa cytR_11 HTH-type transcriptional repressor CytR
2572 JGZO01000034.1 GCA_000741405.1_02572 CDS open 245380-246738 1359_na     452_aa hypothetical protein
2573 JGZO01000034.1 GCA_000741405.1_02573 CDS open 247031-248047 1017_na     338_aa degA_5 HTH-type transcriptional regulator DegA
2574 JGZO01000034.1 GCA_000741405.1_02574 CDS open 248202-249569 1368_na     455_aa hypothetical protein
2575 JGZO01000034.1 GCA_000741405.1_02575 CDS open 249985-251010 1026_na     341_aa ccpA_17 Catabolite control protein A
2576 JGZO01000034.1 GCA_000741405.1_02576 CDS open 251056-252786 1731_na     576_aa glgB_2 1%2C4-alpha-glucan branching enzyme GlgB
2577 JGZO01000034.1 GCA_000741405.1_02577 CDS open 253052-254311 1260_na     419_aa cycB Cyclodextrin-binding protein
2578 JGZO01000034.1 GCA_000741405.1_02578 CDS open 254339-255739 1401_na     466_aa hypothetical protein
2579 JGZO01000034.1 GCA_000741405.1_02579 CDS open 255736-256656 921_na     306_aa hypothetical protein
2580 JGZO01000034.1 GCA_000741405.1_02580 CDS open 256776-258806 2031_na     676_aa pulA Pullulanase
2581 JGZO01000034.1 GCA_000741405.1_02581 CDS open 258875-259618 744_na     247_aa hypothetical protein
2582 JGZO01000034.1 GCA_000741405.1_02582 CDS open 259883-262120 2238_na     745_aa malQ_2 4-alpha-glucanotransferase
2583 JGZO01000034.1 GCA_000741405.1_02583 CDS open 262337-263350 1014_na     337_aa ccpA_18 Catabolite control protein A
2584 JGZO01000034.1 GCA_000741405.1_02584 CDS open 263449-265941 2493_na     830_aa hypothetical protein
2585 JGZO01000034.1 GCA_000741405.1_02585 CDS open 266118-267431 1314_na     437_aa hypothetical protein
2586 JGZO01000034.1 GCA_000741405.1_02586 CDS open 267617-269014 1398_na     465_aa levB Levanbiose-producing levanase
2587 JGZO01000034.1 GCA_000741405.1_02587 CDS open 269298-270380 1083_na     360_aa degA_6 HTH-type transcriptional regulator DegA
2588 JGZO01000034.1 GCA_000741405.1_02588 CDS open 270387-271100 714_na     237_aa hypothetical protein
2589 JGZO01000034.1 GCA_000741405.1_02589 CDS open 271445-272809 1365_na     454_aa hypothetical protein
2590 JGZO01000034.1 GCA_000741405.1_02590 CDS open 273052-274806 1755_na     584_aa malL_2 Oligo-1%2C6-glucosidase
2591 JGZO01000034.1 GCA_000741405.1_02591 CDS open 275138-275974 837_na     278_aa melC_6 Melibioseraffinosestachyose import permease protein MelC
2592 JGZO01000034.1 GCA_000741405.1_02592 CDS open 275971-276825 855_na     284_aa melD_8 Melibioseraffinosestachyose import permease protein MelD
2593 JGZO01000034.1 GCA_000741405.1_02593 CDS open 277154-278176 1023_na     340_aa exuR putative HTH-type transcriptional repressor ExuR
2594 JGZO01000034.1 GCA_000741405.1_02594 CDS open 278317-279651 1335_na     444_aa hypothetical protein
2595 JGZO01000034.1 GCA_000741405.1_02595 CDS open 279992-281092 1101_na     366_aa hypothetical protein
2596 JGZO01000034.1 GCA_000741405.1_02596 CDS open 281240-282586 1347_na     448_aa hypothetical protein
2597 JGZO01000034.1 GCA_000741405.1_02597 CDS open 282835-285330 2496_na     831_aa Extracellular exo-alpha-L-arabinofuranosidase
2598 JGZO01000034.1 GCA_000741405.1_02598 CDS open 285426-287267 1842_na     613_aa ycdG putative oligo-1%2C6-glucosidase 2
2599 JGZO01000034.1 GCA_000741405.1_02599 CDS open 287418-288788 1371_na     456_aa hypothetical protein
2600 JGZO01000034.1 GCA_000741405.1_02600 CDS open 288948-289961 1014_na     337_aa hypothetical protein
2601 JGZO01000034.1 GCA_000741405.1_02601 CDS open 290327-291358 1032_na     343_aa degA_7 HTH-type transcriptional regulator DegA
2602 JGZO01000034.1 GCA_000741405.1_02602 CDS open 291461-292150 690_na     229_aa gpm2 Acid phosphatase
2603 JGZO01000034.1 GCA_000741405.1_02603 CDS open 292281-292565 285_na     94_aa hypothetical protein
2604 JGZO01000034.1 GCA_000741405.1_02604 CDS open 292589-293401 813_na     270_aa nfrA1 FMN reductase (NADPH)
2605 JGZO01000034.1 GCA_000741405.1_02605 CDS open 293683-293934 252_na     83_aa hypothetical protein