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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Bifidobacterium animalis (GCA_000818055.1)

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PROKKA Annotations for GCA_000818055.1
Genome Selected: Bifidobacterium animalis
ContigsBases CDSrRNA tmRNAtRNA
1 1938624 1558 12 1 53
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Annotation Table [page:4]    |    Number of Records Found: 1633 [4 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
1501 CP009045.1 GCA_000818055.1_01501 CDS open 1757442-1757888 447_na     148_aa rplI 50S ribosomal protein L9
1502 CP009045.1 GCA_000818055.1_01502 CDS open 1757909-1758157 249_na     82_aa hypothetical protein
1503 CP009045.1 GCA_000818055.1_01503 CDS open 1758205-1758837 633_na     210_aa Single-stranded DNA-binding protein
1504 CP009045.1 GCA_000818055.1_01504 CDS open 1758875-1759162 288_na     95_aa rpsF 30S ribosomal protein S6
1505 CP009045.1 GCA_000818055.1_01505 CDS open 1759357-1760370 1014_na     337_aa prs_2 Ribose-phosphate pyrophosphokinase
1506 CP009045.1 GCA_000818055.1_01506 CDS open 1760691-1761659 969_na     322_aa rbsK Ribokinase
1507 CP009045.1 GCA_000818055.1_01507 CDS open 1761762-1763240 1479_na     492_aa hypothetical protein
1508 CP009045.1 GCA_000818055.1_01508 CDS open 1763323-1764276 954_na     317_aa rihA_2 Pyrimidine-specific ribonucleoside hydrolase RihA
1509 CP009045.1 GCA_000818055.1_01509 CDS open 1764459-1765505 1047_na     348_aa degA_2 HTH-type transcriptional regulator DegA
1510 CP009045.1 rRNA open 1765880-1765979 5S ribosomal RNA
1511 CP009045.1 rRNA open 1766114-1769179 23S ribosomal RNA
1512 CP009045.1 rRNA open 1769642-1771176 16S ribosomal RNA
1513 CP009045.1 GCA_000818055.1_01513 CDS open 1771764-1772948 1185_na     394_aa glf UDP-galactopyranose mutase
1514 CP009045.1 GCA_000818055.1_01514 CDS open 1773169-1774254 1086_na     361_aa wbbD UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1%2C3-galactosyltransferase
1515 CP009045.1 GCA_000818055.1_01515 CDS open 1774394-1774492 99_na     32_aa hypothetical protein
1516 CP009045.1 GCA_000818055.1_01516 CDS open 1774499-1775521 1023_na     340_aa glfT1 Galactofuranosyltransferase GlfT1
1517 CP009045.1 GCA_000818055.1_01517 CDS open 1775673-1777814 2142_na     713_aa hypothetical protein
1518 CP009045.1 GCA_000818055.1_01518 CDS open 1778000-1780324 2325_na     774_aa hypothetical protein
1519 CP009045.1 GCA_000818055.1_01519 CDS open 1780336-1782390 2055_na     684_aa glfT2 Galactofuranosyltransferase GlfT2
1520 CP009045.1 GCA_000818055.1_01520 CDS open 1782478-1783353 876_na     291_aa hypothetical protein
1521 CP009045.1 GCA_000818055.1_01521 CDS open 1783440-1785068 1629_na     542_aa hypothetical protein
1522 CP009045.1 GCA_000818055.1_01522 CDS open 1785564-1786478 915_na     304_aa IS256 family transposase ISBlo16
1523 CP009045.1 GCA_000818055.1_01523 CDS open 1786608-1787165 558_na     185_aa hypothetical protein
1524 CP009045.1 GCA_000818055.1_01524 CDS open 1787226-1787753 528_na     175_aa hypothetical protein
1525 CP009045.1 GCA_000818055.1_01525 CDS open 1787905-1788606 702_na     233_aa hypothetical protein
1526 CP009045.1 GCA_000818055.1_01526 CDS open 1788626-1789954 1329_na     442_aa hypothetical protein
1527 CP009045.1 GCA_000818055.1_01527 CDS open 1789978-1791393 1416_na     471_aa btuD_17 Vitamin B12 import ATP-binding protein BtuD
1528 CP009045.1 GCA_000818055.1_01528 CDS open 1791393-1792229 837_na     278_aa tagG Teichoic acid translocation permease protein TagG
1529 CP009045.1 GCA_000818055.1_01529 CDS open 1792410-1794356 1947_na     648_aa hypothetical protein
1530 CP009045.1 tRNA open 1794459-1794544 tRNA-Ser(gga)
1531 CP009045.1 GCA_000818055.1_01531 CDS open 1794647-1796878 2232_na     743_aa hypothetical protein
1532 CP009045.1 GCA_000818055.1_01532 CDS open 1796893-1799142 2250_na     749_aa hypothetical protein
1533 CP009045.1 GCA_000818055.1_01533 CDS open 1799433-1801064 1632_na     543_aa hypothetical protein
1534 CP009045.1 GCA_000818055.1_01534 CDS open 1801408-1802748 1341_na     446_aa hypothetical protein
1535 CP009045.1 GCA_000818055.1_01535 CDS open 1802750-1803814 1065_na     354_aa hypothetical protein
1536 CP009045.1 GCA_000818055.1_01536 CDS open 1804007-1804795 789_na     262_aa hypothetical protein
1537 CP009045.1 GCA_000818055.1_01537 CDS open 1805034-1805936 903_na     300_aa egtC Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase
1538 CP009045.1 GCA_000818055.1_01538 CDS open 1806217-1808409 2193_na     730_aa kup Low affinity potassium transport system protein kup
1539 CP009045.1 GCA_000818055.1_01539 CDS open 1808615-1809571 957_na     318_aa dtd3 D-aminoacyl-tRNA deacylase
1540 CP009045.1 GCA_000818055.1_01540 CDS open 1809742-1812138 2397_na     798_aa hypothetical protein
1541 CP009045.1 GCA_000818055.1_01541 CDS open 1812216-1812929 714_na     237_aa hypothetical protein
1542 CP009045.1 GCA_000818055.1_01542 CDS open 1813127-1814920 1794_na     597_aa putative ABC transporter ATP-binding protein
1543 CP009045.1 GCA_000818055.1_01543 CDS open 1815121-1816917 1797_na     598_aa Putative multidrug export ATP-bindingpermease protein
1544 CP009045.1 GCA_000818055.1_01544 CDS open 1817887-1819746 1860_na     619_aa metG Methionine--tRNA ligase
1545 CP009045.1 GCA_000818055.1_01545 CDS open 1820016-1820699 684_na     227_aa hypothetical protein
1546 CP009045.1 GCA_000818055.1_01546 CDS open 1820734-1821180 447_na     148_aa hypothetical protein
1547 CP009045.1 GCA_000818055.1_01547 CDS open 1821215-1822162 948_na     315_aa rsmI Ribosomal RNA small subunit methyltransferase I
1548 CP009045.1 GCA_000818055.1_01548 CDS open 1822320-1823933 1614_na     537_aa pmt putative dolichyl-phosphate-mannose--protein mannosyltransferase
1549 CP009045.1 GCA_000818055.1_01549 CDS open 1824484-1825305 822_na     273_aa axeA1 Acetylxylan esterase
1550 CP009045.1 GCA_000818055.1_01550 CDS open 1825626-1826375 750_na     249_aa dedA Protein DedA
1551 CP009045.1 tRNA open 1826549-1826622 tRNA-Ala(cgc)
1552 CP009045.1 GCA_000818055.1_01552 CDS open 1826691-1827398 708_na     235_aa hypothetical protein
1553 CP009045.1 GCA_000818055.1_01553 CDS open 1827435-1829765 2331_na     776_aa Beta-xylosidase
1554 CP009045.1 GCA_000818055.1_01554 CDS open 1829888-1830526 639_na     212_aa betI HTH-type transcriptional regulator BetI
1555 CP009045.1 GCA_000818055.1_01555 CDS open 1830782-1831468 687_na     228_aa Phosphorylated carbohydrates phosphatase
1556 CP009045.1 GCA_000818055.1_01556 CDS open 1831573-1832088 516_na     171_aa hypothetical protein
1557 CP009045.1 GCA_000818055.1_01557 CDS open 1832133-1833188 1056_na     351_aa cbpA_2 Curved DNA-binding protein
1558 CP009045.1 GCA_000818055.1_01558 CDS open 1833319-1834008 690_na     229_aa grpE Protein GrpE
1559 CP009045.1 GCA_000818055.1_01559 CDS open 1834008-1835873 1866_na     621_aa dnaK Chaperone protein DnaK
1560 CP009045.1 GCA_000818055.1_01560 CDS open 1836222-1836356 135_na     44_aa hypothetical protein
1561 CP009045.1 GCA_000818055.1_01561 CDS open 1836626-1837651 1026_na     341_aa cytR_2 HTH-type transcriptional repressor CytR
1562 CP009045.1 GCA_000818055.1_01562 CDS open 1837691-1838464 774_na     257_aa hypothetical protein
1563 CP009045.1 GCA_000818055.1_01563 CDS open 1838480-1839262 783_na     260_aa gph_2 Phosphoglycolate phosphatase
1564 CP009045.1 GCA_000818055.1_01564 CDS open 1839273-1841372 2100_na     699_aa amyX Pullulanase
1565 CP009045.1 GCA_000818055.1_01565 CDS open 1841377-1842345 969_na     322_aa hypothetical protein
1566 CP009045.1 GCA_000818055.1_01566 CDS open 1842342-1843751 1410_na     469_aa hypothetical protein
1567 CP009045.1 GCA_000818055.1_01567 CDS open 1844035-1845294 1260_na     419_aa malX Maltosemaltodextrin-binding protein
1568 CP009045.1 GCA_000818055.1_01568 CDS open 1845564-1847168 1605_na     534_aa malL_1 Oligo-1%2C6-glucosidase 1
1569 CP009045.1 GCA_000818055.1_01569 CDS open 1847614-1849812 2199_na     732_aa malQ_2 4-alpha-glucanotransferase
1570 CP009045.1 GCA_000818055.1_01570 CDS open 1850284-1850856 573_na     190_aa hypothetical protein
1571 CP009045.1 GCA_000818055.1_01571 CDS open 1851205-1852041 837_na     278_aa araQ_2 L-arabinose transport system permease protein AraQ
1572 CP009045.1 GCA_000818055.1_01572 CDS open 1852041-1852895 855_na     284_aa melD_2 Melibioseraffinosestachyose import permease protein MelD
1573 CP009045.1 GCA_000818055.1_01573 CDS open 1853358-1854368 1011_na     336_aa cytR_3 HTH-type transcriptional repressor CytR
1574 CP009045.1 GCA_000818055.1_01574 CDS open 1854571-1854813 243_na     80_aa hypothetical protein
1575 CP009045.1 GCA_000818055.1_01575 CDS open 1854720-1856054 1335_na     444_aa hypothetical protein
1576 CP009045.1 GCA_000818055.1_01576 CDS open 1856413-1858188 1776_na     591_aa treC Trehalose-6-phosphate hydrolase
1577 CP009045.1 GCA_000818055.1_01577 CDS open 1858518-1859141 624_na     207_aa gpm2 Acid phosphatase
1578 CP009045.1 GCA_000818055.1_01578 CDS open 1859349-1859765 417_na     138_aa hypothetical protein
1579 CP009045.1 GCA_000818055.1_01579 CDS open 1859865-1860641 777_na     258_aa nfrA1 FMN reductase (NADPH)
1580 CP009045.1 GCA_000818055.1_01580 CDS open 1860967-1861218 252_na     83_aa hypothetical protein
1581 CP009045.1 GCA_000818055.1_01581 CDS open 1861264-1861836 573_na     190_aa hypothetical protein
1582 CP009045.1 rRNA open 1862201-1862300 5S ribosomal RNA
1583 CP009045.1 rRNA open 1862435-1865500 23S ribosomal RNA
1584 CP009045.1 rRNA open 1865963-1867497 16S ribosomal RNA
1585 CP009045.1 GCA_000818055.1_01585 CDS open 1868127-1868663 537_na     178_aa nadE_2 Glutamine-dependent NAD(+) synthetase
1586 CP009045.1 GCA_000818055.1_01586 CDS open 1868698-1870032 1335_na     444_aa nadE_3 Glutamine-dependent NAD(+) synthetase
1587 CP009045.1 GCA_000818055.1_01587 CDS open 1870196-1870465 270_na     89_aa hypothetical protein
1588 CP009045.1 rRNA open 1870911-1871010 5S ribosomal RNA
1589 CP009045.1 rRNA open 1871145-1874210 23S ribosomal RNA
1590 CP009045.1 rRNA open 1874673-1876207 16S ribosomal RNA
1591 CP009045.1 GCA_000818055.1_01591 CDS open 1876824-1878269 1446_na     481_aa xylP Isoprimeverose transporter
1592 CP009045.1 GCA_000818055.1_01592 CDS open 1878458-1880473 2016_na     671_aa hypBA1 Non-reducing end beta-L-arabinofuranosidase
1593 CP009045.1 GCA_000818055.1_01593 CDS open 1880608-1881657 1050_na     349_aa cytR_4 HTH-type transcriptional repressor CytR
1594 CP009045.1 GCA_000818055.1_01594 CDS open 1881728-1882483 756_na     251_aa cobB NAD-dependent protein deacetylase
1595 CP009045.1 GCA_000818055.1_01595 CDS open 1882641-1883849 1209_na     402_aa tdcB L-threonine ammonia-lyase
1596 CP009045.1 GCA_000818055.1_01596 CDS open 1884066-1885901 1836_na     611_aa malL_2 Oligo-1%2C6-glucosidase
1597 CP009045.1 GCA_000818055.1_01597 CDS open 1885980-1886108 129_na     42_aa hypothetical protein
1598 CP009045.1 GCA_000818055.1_01598 CDS open 1886702-1887658 957_na     318_aa hypothetical protein
1599 CP009045.1 GCA_000818055.1_01599 CDS open 1888099-1889991 1893_na     630_aa hypothetical protein
1600 CP009045.1 GCA_000818055.1_01600 CDS open 1890944-1891849 906_na     301_aa ngcG_2 Diacetylchitobiose uptake system permease protein NgcG
1601 CP009045.1 GCA_000818055.1_01601 CDS open 1891854-1892846 993_na     330_aa melD_3 Melibioseraffinosestachyose import permease protein MelD
1602 CP009045.1 GCA_000818055.1_01602 CDS open 1892880-1894175 1296_na     431_aa msmE Multiple sugar-binding protein
1603 CP009045.1 GCA_000818055.1_01603 CDS open 1894324-1895532 1209_na     402_aa nagC_2 N-acetylglucosamine repressor
1604 CP009045.1 GCA_000818055.1_01604 CDS open 1895557-1897779 2223_na     740_aa rafA Alpha-galactosidase
1605 CP009045.1 GCA_000818055.1_01605 CDS open 1897895-1898353 459_na     152_aa tadA tRNA-specific adenosine deaminase
1606 CP009045.1 GCA_000818055.1_01606 CDS open 1898554-1900626 2073_na     690_aa hypothetical protein
1607 CP009045.1 GCA_000818055.1_01607 CDS open 1900697-1901635 939_na     312_aa hypothetical protein
1608 CP009045.1 GCA_000818055.1_01608 CDS open 1901678-1903237 1560_na     519_aa smc_2 Chromosome partition protein Smc
1609 CP009045.1 GCA_000818055.1_01609 CDS open 1903287-1903868 582_na     193_aa dcd dCTP deaminase%2C dUMP-forming
1610 CP009045.1 GCA_000818055.1_01610 CDS open 1904078-1907068 2991_na     996_aa pacL Calcium-transporting ATPase
1611 CP009045.1 GCA_000818055.1_01611 CDS open 1907383-1908378 996_na     331_aa putative tRNArRNA methyltransferase
1612 CP009045.1 GCA_000818055.1_01612 CDS open 1908527-1909975 1449_na     482_aa hypothetical protein
1613 CP009045.1 GCA_000818055.1_01613 CDS open 1910183-1911316 1134_na     377_aa msiK Diacetylchitobiose uptake system ATP-binding protein MsiK
1614 CP009045.1 misc_RNA open 1911321-1911379 msiK
1615 CP009045.1 GCA_000818055.1_01615 CDS open 1911740-1912762 1023_na     340_aa hypothetical protein
1616 CP009045.1 GCA_000818055.1_01616 CDS open 1912832-1914949 2118_na     705_aa pknD_4 Serinethreonine-protein kinase PknD
1617 CP009045.1 GCA_000818055.1_01617 CDS open 1915329-1916366 1038_na     345_aa hypothetical protein
1618 CP009045.1 tRNA open 1916580-1916656 tRNA-Thr(tgt)
1619 CP009045.1 GCA_000818055.1_01619 CDS open 1917034-1918581 1548_na     515_aa hypothetical protein
1620 CP009045.1 GCA_000818055.1_01620 CDS open 1918723-1919616 894_na     297_aa ksgA Ribosomal RNA small subunit methyltransferase A
1621 CP009045.1 GCA_000818055.1_01621 CDS open 1919613-1920569 957_na     318_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
1622 CP009045.1 GCA_000818055.1_01622 CDS open 1920641-1921267 627_na     208_aa hypothetical protein
1623 CP009045.1 GCA_000818055.1_01623 CDS open 1921397-1922971 1575_na     524_aa cca CCA-adding enzyme
1624 CP009045.1 GCA_000818055.1_01624 CDS open 1923001-1924005 1005_na     334_aa rppH RNA pyrophosphohydrolase
1625 CP009045.1 GCA_000818055.1_01625 CDS open 1924008-1926257 2250_na     749_aa hypothetical protein
1626 CP009045.1 GCA_000818055.1_01626 CDS open 1926254-1930276 4023_na     1340_aa murJ lipid II flippase MurJ
1627 CP009045.1 GCA_000818055.1_01627 CDS open 1930517-1931479 963_na     320_aa trxB Thioredoxin reductase
1628 CP009045.1 GCA_000818055.1_01628 CDS open 1931589-1932977 1389_na     462_aa noc Nucleoid occlusion protein
1629 CP009045.1 GCA_000818055.1_01629 CDS open 1932977-1933951 975_na     324_aa Iron-sulfur cluster carrier protein
1630 CP009045.1 GCA_000818055.1_01630 CDS open 1934585-1935328 744_na     247_aa rsmG Ribosomal RNA small subunit methyltransferase G
1631 CP009045.1 GCA_000818055.1_01631 CDS open 1935784-1936326 543_na     180_aa hypothetical protein
1632 CP009045.1 GCA_000818055.1_01632 CDS open 1936449-1937459 1011_na     336_aa yidC Membrane protein insertase YidC
1633 CP009045.1 GCA_000818055.1_01633 CDS open 1938143-1938277 135_na     44_aa rpmH 50S ribosomal protein L34