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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Lactococcus lactis (GCA_000835975.1)

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PROKKA Annotations for GCA_000835975.1
Genome Selected: Lactococcus lactis
ContigsBases CDSrRNA tmRNAtRNA
88 2545792 2568 4 1 52
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Annotation Table [page:6]    |    Number of Records Found: 2668 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 BBSI01000008.1 GCA_000835975.1_02501 CDS open 30500-31237 738_na     245_aa znuC High-affinity zinc uptake system ATP-binding protein ZnuC
2502 BBSI01000008.1 GCA_000835975.1_02502 CDS open 31230-32039 810_na     269_aa znuB High-affinity zinc uptake system membrane protein ZnuB
2503 BBSI01000008.1 GCA_000835975.1_02503 CDS open 32077-32943 867_na     288_aa rluC Ribosomal large subunit pseudouridine synthase C
2504 BBSI01000008.1 GCA_000835975.1_02504 CDS open 33148-33525 378_na     125_aa FMN-binding protein
2505 BBSI01000008.1 GCA_000835975.1_02505 CDS open 33639-34070 432_na     143_aa hypothetical protein
2506 BBSI01000008.1 GCA_000835975.1_02506 CDS open 34087-34722 636_na     211_aa hypothetical protein
2507 BBSI01000008.1 GCA_000835975.1_02507 CDS open 35031-37262 2232_na     743_aa mtgA_2 Biosynthetic peptidoglycan transglycosylase
2508 BBSI01000008.1 GCA_000835975.1_02508 CDS open 37364-38770 1407_na     468_aa hypothetical protein
2509 BBSI01000008.1 GCA_000835975.1_02509 CDS open 38786-39181 396_na     131_aa oatA O-acetyltransferase OatA
2510 BBSI01000008.1 GCA_000835975.1_02510 CDS open 39482-39676 195_na     64_aa hypothetical protein
2511 BBSI01000008.1 GCA_000835975.1_02511 CDS open 39874-40431 558_na     185_aa nusG Transcription terminationantitermination protein NusG
2512 BBSI01000008.1 GCA_000835975.1_02512 CDS open 40533-42023 1491_na     496_aa thrC Threonine synthase
2513 BBSI01000008.1 GCA_000835975.1_02513 CDS open 42020-43309 1290_na     429_aa yeeO putative FMNFAD exporter YeeO
2514 BBSI01000008.1 GCA_000835975.1_02514 CDS open 43350-43718 369_na     122_aa mscL_2 Large-conductance mechanosensitive channel
2515 BBSI01000008.1 GCA_000835975.1_02515 CDS open 44031-44339 309_na     102_aa rpsJ 30S ribosomal protein S10
2516 BBSI01000008.1 GCA_000835975.1_02516 CDS open 44358-44981 624_na     207_aa rplC 50S ribosomal protein L3
2517 BBSI01000008.1 GCA_000835975.1_02517 CDS open 45007-45633 627_na     208_aa rplD 50S ribosomal protein L4
2518 BBSI01000008.1 GCA_000835975.1_02518 CDS open 45633-45926 294_na     97_aa rplW 50S ribosomal protein L23
2519 BBSI01000008.1 GCA_000835975.1_02519 CDS open 45942-46772 831_na     276_aa rplB 50S ribosomal protein L2
2520 BBSI01000008.1 GCA_000835975.1_02520 CDS open 46932-47210 279_na     92_aa rpsS 30S ribosomal protein S19
2521 BBSI01000008.1 GCA_000835975.1_02521 CDS open 47226-47573 348_na     115_aa rplV 50S ribosomal protein L22
2522 BBSI01000008.1 GCA_000835975.1_02522 CDS open 47586-48239 654_na     217_aa rpsC 30S ribosomal protein S3
2523 BBSI01000008.1 GCA_000835975.1_02523 CDS open 48243-48656 414_na     137_aa rplP 50S ribosomal protein L16
2524 BBSI01000008.1 GCA_000835975.1_02524 CDS open 48656-48865 210_na     69_aa rpmC 50S ribosomal protein L29
2525 BBSI01000008.1 GCA_000835975.1_02525 CDS open 48886-49146 261_na     86_aa rpsQ 30S ribosomal protein S17
2526 BBSI01000008.1 GCA_000835975.1_02526 CDS open 49169-49537 369_na     122_aa rplN 50S ribosomal protein L14
2527 BBSI01000008.1 GCA_000835975.1_02527 CDS open 49671-49976 306_na     101_aa rplX 50S ribosomal protein L24
2528 BBSI01000007.1 GCA_000835975.1_02528 CDS open 1094-2848 1755_na     584_aa hypothetical protein
2529 BBSI01000007.1 GCA_000835975.1_02529 CDS open 3077-4618 1542_na     513_aa rlmCD 23S rRNA (uracil-C(5))-methyltransferase RlmCD
2530 BBSI01000007.1 GCA_000835975.1_02530 CDS open 4949-5218 270_na     89_aa hypothetical protein
2531 BBSI01000007.1 GCA_000835975.1_02531 CDS open 5233-5655 423_na     140_aa hypothetical protein
2532 BBSI01000007.1 GCA_000835975.1_02532 CDS open 5718-5813 96_na     31_aa hypothetical protein
2533 BBSI01000007.1 GCA_000835975.1_02533 CDS open 5810-6319 510_na     169_aa hypothetical protein
2534 BBSI01000007.1 GCA_000835975.1_02534 CDS open 6320-6664 345_na     114_aa hypothetical protein
2535 BBSI01000007.1 GCA_000835975.1_02535 CDS open 6703-6951 249_na     82_aa hypothetical protein
2536 BBSI01000007.1 GCA_000835975.1_02536 CDS open 7228-7563 336_na     111_aa hypothetical protein
2537 BBSI01000007.1 GCA_000835975.1_02537 CDS open 8139-10793 2655_na     884_aa valS Valine--tRNA ligase
2538 BBSI01000007.1 GCA_000835975.1_02538 CDS open 11196-11528 333_na     110_aa yybR putative HTH-type transcriptional regulator YybR
2539 BBSI01000007.1 GCA_000835975.1_02539 CDS open 11701-12546 846_na     281_aa qorB Quinone oxidoreductase 2
2540 BBSI01000007.1 GCA_000835975.1_02540 CDS open 12580-13086 507_na     168_aa hypothetical protein
2541 BBSI01000007.1 GCA_000835975.1_02541 CDS open 13430-14776 1347_na     448_aa pgi Glucose-6-phosphate isomerase
2542 BBSI01000007.1 GCA_000835975.1_02542 CDS open 14965-16191 1227_na     408_aa mdrP_1 Na(+)%2C Li(+)%2C K(+)H(+) antiporter
2543 BBSI01000007.1 GCA_000835975.1_02543 CDS open 16273-17493 1221_na     406_aa mdrP_2 Na(+)%2C Li(+)%2C K(+)H(+) antiporter
2544 BBSI01000007.1 GCA_000835975.1_02544 CDS open 17664-18203 540_na     179_aa rsmD Ribosomal RNA small subunit methyltransferase D
2545 BBSI01000007.1 GCA_000835975.1_02545 CDS open 18251-18766 516_na     171_aa coaD Phosphopantetheine adenylyltransferase
2546 BBSI01000007.1 GCA_000835975.1_02546 CDS open 18841-19761 921_na     306_aa ylbL putative protein YlbL
2547 BBSI01000007.1 GCA_000835975.1_02547 CDS open 20083-20196 114_na     37_aa hypothetical protein
2548 BBSI01000007.1 GCA_000835975.1_02548 CDS open 20264-21583 1320_na     439_aa pqqE PqqA peptide cyclase
2549 BBSI01000007.1 GCA_000835975.1_02549 CDS open 21580-22719 1140_na     379_aa hypothetical protein
2550 BBSI01000007.1 GCA_000835975.1_02550 CDS open 22830-23687 858_na     285_aa hypothetical protein
2551 BBSI01000007.1 GCA_000835975.1_02551 CDS open 23772-26483 2712_na     903_aa adhE Aldehyde-alcohol dehydrogenase
2552 BBSI01000007.1 GCA_000835975.1_02552 CDS open 26715-27740 1026_na     341_aa pgl 6-phosphogluconolactonase
2553 BBSI01000007.1 GCA_000835975.1_02553 CDS open 28097-28864 768_na     255_aa rpsB 30S ribosomal protein S2
2554 BBSI01000007.1 GCA_000835975.1_02554 CDS open 28987-30015 1029_na     342_aa tsf Elongation factor Ts
2555 BBSI01000007.1 GCA_000835975.1_02555 CDS open 30220-31950 1731_na     576_aa ezrA Septation ring formation regulator EzrA
2556 BBSI01000007.1 GCA_000835975.1_02556 CDS open 32206-32697 492_na     163_aa hypothetical protein
2557 BBSI01000006.1 GCA_000835975.1_02557 CDS open 93-401 309_na     102_aa hypothetical protein
2558 BBSI01000006.1 GCA_000835975.1_02558 CDS open 439-1287 849_na     282_aa hexR_2 HTH-type transcriptional regulator HexR
2559 BBSI01000006.1 GCA_000835975.1_02559 CDS open 1649-2557 909_na     302_aa 6-phosphogluconate dehydrogenase%2C NAD(+)-dependent%2C decarboxylating
2560 BBSI01000006.1 GCA_000835975.1_02560 CDS open 2678-3592 915_na     304_aa xylB_3 Xylulose kinase
2561 BBSI01000006.1 GCA_000835975.1_02561 CDS open 3677-4189 513_na     170_aa xylB_4 Xylulose kinase
2562 BBSI01000006.1 GCA_000835975.1_02562 CDS open 4323-5738 1416_na     471_aa gntT High-affinity gluconate transporter
2563 BBSI01000005.1 GCA_000835975.1_02563 CDS open 515-1303 789_na     262_aa hypothetical protein
2564 BBSI01000005.1 GCA_000835975.1_02564 CDS open 2857-2955 99_na     32_aa hypothetical protein
2565 BBSI01000005.1 GCA_000835975.1_02565 CDS open 3231-4409 1179_na     392_aa xerC_11 Tyrosine recombinase XerC
2566 BBSI01000005.1 GCA_000835975.1_02566 CDS open 4962-6962 2001_na     666_aa recG ATP-dependent DNA helicase RecG
2567 BBSI01000005.1 GCA_000835975.1_02567 CDS open 6962-7708 747_na     248_aa hypothetical protein
2568 BBSI01000005.1 GCA_000835975.1_02568 CDS open 7759-9126 1368_na     455_aa mnmE tRNA modification GTPase MnmE
2569 BBSI01000005.1 GCA_000835975.1_02569 CDS open 9250-9972 723_na     240_aa hypothetical protein
2570 BBSI01000005.1 GCA_000835975.1_02570 CDS open 9975-10796 822_na     273_aa rsuA Ribosomal small subunit pseudouridine synthase A
2571 BBSI01000005.1 GCA_000835975.1_02571 CDS open 10875-11489 615_na     204_aa slmA_2 Nucleoid occlusion factor SlmA
2572 BBSI01000005.1 GCA_000835975.1_02572 CDS open 11897-13483 1587_na     528_aa hypothetical protein
2573 BBSI01000005.1 GCA_000835975.1_02573 CDS open 13568-16207 2640_na     879_aa hypothetical protein
2574 BBSI01000005.1 GCA_000835975.1_02574 CDS open 16454-16657 204_na     67_aa hypothetical protein
2575 BBSI01000005.1 GCA_000835975.1_02575 CDS open 16677-17114 438_na     145_aa Putative universal stress protein
2576 BBSI01000005.1 GCA_000835975.1_02576 CDS open 17177-18397 1221_na     406_aa hypothetical protein
2577 BBSI01000005.1 GCA_000835975.1_02577 CDS open 18495-19166 672_na     223_aa larR Lactate racemization regulatory protein
2578 BBSI01000005.1 GCA_000835975.1_02578 CDS open 19250-19924 675_na     224_aa rpiA Ribose-5-phosphate isomerase A
2579 BBSI01000005.1 GCA_000835975.1_02579 CDS open 19953-20393 441_na     146_aa hypothetical protein
2580 BBSI01000005.1 GCA_000835975.1_02580 CDS open 20686-21561 876_na     291_aa mreC Cell shape-determining protein MreC
2581 BBSI01000005.1 GCA_000835975.1_02581 CDS open 21651-22178 528_na     175_aa hypothetical protein
2582 BBSI01000005.1 GCA_000835975.1_02582 CDS open 22282-23694 1413_na     470_aa hypothetical protein
2583 BBSI01000005.1 GCA_000835975.1_02583 CDS open 23815-25692 1878_na     625_aa asnB_2 Asparagine synthetase [glutamine-hydrolyzing] 1
2584 BBSI01000005.1 GCA_000835975.1_02584 CDS open 25704-26930 1227_na     408_aa D-aspartate ligase
2585 BBSI01000005.1 GCA_000835975.1_02585 CDS open 26962-27684 723_na     240_aa Aspartate racemase
2586 BBSI01000005.1 GCA_000835975.1_02586 CDS open 27729-28415 687_na     228_aa hypothetical protein
2587 BBSI01000005.1 GCA_000835975.1_02587 CDS open 28529-29668 1140_na     379_aa dnaJ Chaperone protein DnaJ
2588 BBSI01000005.1 GCA_000835975.1_02588 CDS open 29807-30334 528_na     175_aa gph_3 Phosphoglycolate phosphatase
2589 BBSI01000005.1 GCA_000835975.1_02589 CDS open 30527-32038 1512_na     503_aa zwf Glucose-6-phosphate 1-dehydrogenase
2590 BBSI01000005.1 GCA_000835975.1_02590 CDS open 32108-32287 180_na     59_aa hypothetical protein
2591 BBSI01000005.1 GCA_000835975.1_02591 CDS open 32473-33324 852_na     283_aa hypothetical protein
2592 BBSI01000005.1 GCA_000835975.1_02592 CDS open 33324-33701 378_na     125_aa hypothetical protein
2593 BBSI01000005.1 tRNA open 33842-33924 tRNA-Leu(cag)
2594 BBSI01000005.1 GCA_000835975.1_02594 CDS open 33996-34202 207_na     68_aa hypothetical protein
2595 BBSI01000005.1 GCA_000835975.1_02595 CDS open 34244-35125 882_na     293_aa glxR 2-hydroxy-3-oxopropionate reductase
2596 BBSI01000005.1 GCA_000835975.1_02596 CDS open 35341-35688 348_na     115_aa hypothetical protein
2597 BBSI01000005.1 GCA_000835975.1_02597 CDS open 35882-38404 2523_na     840_aa mutS DNA mismatch repair protein MutS
2598 BBSI01000005.1 GCA_000835975.1_02598 CDS open 38519-39214 696_na     231_aa hypothetical protein
2599 BBSI01000005.1 GCA_000835975.1_02599 CDS open 39226-41313 2088_na     695_aa mutL DNA mismatch repair protein MutL
2600 BBSI01000005.1 GCA_000835975.1_02600 CDS open 41426-42019 594_na     197_aa ruvA Holliday junction ATP-dependent DNA helicase RuvA
2601 BBSI01000005.1 GCA_000835975.1_02601 CDS open 42146-43147 1002_na     333_aa ruvB Holliday junction ATP-dependent DNA helicase RuvB
2602 BBSI01000005.1 GCA_000835975.1_02602 CDS open 43284-44168 885_na     294_aa hypothetical protein
2603 BBSI01000005.1 GCA_000835975.1_02603 CDS open 44388-44678 291_na     96_aa hypothetical protein
2604 BBSI01000005.1 GCA_000835975.1_02604 CDS open 44745-45929 1185_na     394_aa hypothetical protein
2605 BBSI01000005.1 GCA_000835975.1_02605 CDS open 45926-46471 546_na     181_aa yxlF putative ABC transporter ATP-binding protein YxlF
2606 BBSI01000005.1 GCA_000835975.1_02606 CDS open 46648-46812 165_na     54_aa hypothetical protein
2607 BBSI01000005.1 GCA_000835975.1_02607 CDS open 46956-47393 438_na     145_aa yfkJ Low molecular weight protein-tyrosine-phosphatase YfkJ
2608 BBSI01000005.1 GCA_000835975.1_02608 CDS open 47494-47859 366_na     121_aa glnR HTH-type transcriptional regulator GlnR
2609 BBSI01000005.1 GCA_000835975.1_02609 CDS open 47921-49261 1341_na     446_aa glnA Glutamine synthetase
2610 BBSI01000005.1 GCA_000835975.1_02610 CDS open 49320-49520 201_na     66_aa hypothetical protein
2611 BBSI01000005.1 GCA_000835975.1_02611 CDS open 49738-50184 447_na     148_aa hypothetical protein
2612 BBSI01000005.1 GCA_000835975.1_02612 CDS open 50273-50731 459_na     152_aa hypothetical protein
2613 BBSI01000005.1 GCA_000835975.1_02613 CDS open 51055-51543 489_na     162_aa msrC Free methionine-R-sulfoxide reductase
2614 BBSI01000005.1 GCA_000835975.1_02614 CDS open 51575-52216 642_na     213_aa hypothetical protein
2615 BBSI01000005.1 GCA_000835975.1_02615 CDS open 52265-53923 1659_na     552_aa hypothetical protein
2616 BBSI01000005.1 GCA_000835975.1_02616 CDS open 53958-55424 1467_na     488_aa lysP_2 Lysine-specific permease
2617 BBSI01000005.1 misc_RNA open 55583-55765 Lysine
2618 BBSI01000005.1 GCA_000835975.1_02618 CDS open 55948-56802 855_na     284_aa uppP Undecaprenyl-diphosphatase
2619 BBSI01000005.1 GCA_000835975.1_02619 CDS open 56994-57287 294_na     97_aa rpsF 30S ribosomal protein S6
2620 BBSI01000005.1 GCA_000835975.1_02620 CDS open 57317-57817 501_na     166_aa ssb_3 Single-stranded DNA-binding protein
2621 BBSI01000005.1 GCA_000835975.1_02621 CDS open 57991-58236 246_na     81_aa rpsR 30S ribosomal protein S18
2622 BBSI01000005.1 GCA_000835975.1_02622 CDS open 58436-59209 774_na     257_aa lpxG UDP-2%2C3-diacylglucosamine pyrophosphatase LpxG
2623 BBSI01000004.1 tRNA open 5-87 tRNA-Tyr(gta)
2624 BBSI01000004.1 tRNA open 93-163 tRNA-Trp(cca)
2625 BBSI01000004.1 tRNA open 173-247 tRNA-His(gtg)
2626 BBSI01000004.1 tRNA open 253-324 tRNA-Gln(ttg)
2627 BBSI01000004.1 tRNA open 337-420 tRNA-Leu(caa)
2628 BBSI01000004.1 GCA_000835975.1_02628 CDS open 552-1007 456_na     151_aa hypothetical protein
2629 BBSI01000004.1 GCA_000835975.1_02629 CDS open 1031-1735 705_na     234_aa hypothetical protein
2630 BBSI01000004.1 GCA_000835975.1_02630 CDS open 2037-3056 1020_na     339_aa hypothetical protein
2631 BBSI01000004.1 GCA_000835975.1_02631 CDS open 3181-3708 528_na     175_aa hypothetical protein
2632 BBSI01000004.1 GCA_000835975.1_02632 CDS open 3750-6443 2694_na     897_aa Calcium-transporting ATPase 1
2633 BBSI01000004.1 GCA_000835975.1_02633 CDS open 6572-7093 522_na     173_aa putative protein
2634 BBSI01000004.1 GCA_000835975.1_02634 CDS open 7374-8384 1011_na     336_aa gap_2 Glyceraldehyde-3-phosphate dehydrogenase
2635 BBSI01000004.1 GCA_000835975.1_02635 CDS open 8522-8635 114_na     37_aa hypothetical protein
2636 BBSI01000004.1 GCA_000835975.1_02636 CDS open 8994-9164 171_na     56_aa hypothetical protein
2637 BBSI01000004.1 GCA_000835975.1_02637 CDS open 9389-9751 363_na     120_aa hypothetical protein
2638 BBSI01000004.1 GCA_000835975.1_02638 CDS open 9764-10339 576_na     191_aa hypothetical protein
2639 BBSI01000004.1 GCA_000835975.1_02639 CDS open 10501-10707 207_na     68_aa hypothetical protein
2640 BBSI01000004.1 GCA_000835975.1_02640 CDS open 10922-12556 1635_na     544_aa hypothetical protein
2641 BBSI01000004.1 GCA_000835975.1_02641 CDS open 12567-13193 627_na     208_aa hypothetical protein
2642 BBSI01000004.1 GCA_000835975.1_02642 CDS open 13357-13692 336_na     111_aa hypothetical protein
2643 BBSI01000004.1 GCA_000835975.1_02643 CDS open 13679-13873 195_na     64_aa hypothetical protein
2644 BBSI01000004.1 GCA_000835975.1_02644 CDS open 13870-14124 255_na     84_aa hypothetical protein
2645 BBSI01000004.1 GCA_000835975.1_02645 CDS open 14121-14360 240_na     79_aa hypothetical protein
2646 BBSI01000004.1 GCA_000835975.1_02646 CDS open 14403-14684 282_na     93_aa hypothetical protein
2647 BBSI01000004.1 GCA_000835975.1_02647 CDS open 14681-15202 522_na     173_aa hypothetical protein
2648 BBSI01000004.1 GCA_000835975.1_02648 CDS open 15213-15377 165_na     54_aa hypothetical protein
2649 BBSI01000004.1 GCA_000835975.1_02649 CDS open 15392-15613 222_na     73_aa hypothetical protein
2650 BBSI01000004.1 GCA_000835975.1_02650 CDS open 15800-15985 186_na     61_aa hypothetical protein
2651 BBSI01000004.1 GCA_000835975.1_02651 CDS open 16241-16618 378_na     125_aa hypothetical protein
2652 BBSI01000002.1 misc_RNA open 137-220 ctRNA_pND324
2653 BBSI01000002.1 GCA_000835975.1_02653 CDS open 221-1399 1179_na     392_aa hypothetical protein
2654 BBSI01000002.1 GCA_000835975.1_02654 CDS open 1396-1992 597_na     198_aa hypothetical protein
2655 BBSI01000002.1 GCA_000835975.1_02655 CDS open 1980-2627 648_na     215_aa hsdS Type-1 restriction enzyme EcoKI specificity protein
2656 BBSI01000002.1 GCA_000835975.1_02656 CDS open 2624-2896 273_na     90_aa hypothetical protein
2657 BBSI01000002.1 GCA_000835975.1_02657 CDS open 3254-3778 525_na     174_aa hypothetical protein
2658 BBSI01000002.1 GCA_000835975.1_02658 CDS open 4556-4852 297_na     98_aa hypothetical protein
2659 BBSI01000002.1 GCA_000835975.1_02659 CDS open 4881-5345 465_na     154_aa hypothetical protein
2660 BBSI01000001.1 misc_RNA open 138-223 ctRNA_pND324
2661 BBSI01000001.1 GCA_000835975.1_02661 CDS open 223-465 243_na     80_aa hypothetical protein
2662 BBSI01000001.1 GCA_000835975.1_02662 CDS open 506-1546 1041_na     346_aa hypothetical protein
2663 BBSI01000001.1 GCA_000835975.1_02663 CDS open 1629-2396 768_na     255_aa soj Sporulation initiation inhibitor protein Soj
2664 BBSI01000001.1 GCA_000835975.1_02664 CDS open 2401-2703 303_na     100_aa hypothetical protein
2665 BBSI01000001.1 GCA_000835975.1_02665 CDS open 2875-3327 453_na     150_aa hypothetical protein
2666 BBSI01000001.1 GCA_000835975.1_02666 CDS open 3590-4180 591_na     196_aa hypothetical protein
2667 BBSI01000001.1 misc_RNA open 4561-4666 lactis-plasmid
2668 BBSI01000001.1 GCA_000835975.1_02668 CDS open 4820-5107 288_na     95_aa hypothetical protein