HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Bifidobacterium scardovii (GCA_001005065.1)

Select a Genome:
PROKKA Annotations for GCA_001005065.1
Genome Selected: Bifidobacterium scardovii
ContigsBases CDSrRNA tmRNAtRNA
57 3143954 2517 2 1 58
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 2591 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:6]    |    Number of Records Found: 2591 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 LBIB01000009.1 GCA_001005065.1_02501 CDS open 105763-107301 1539_na     512_aa purF Amidophosphoribosyltransferase
2502 LBIB01000009.1 GCA_001005065.1_02502 CDS open 107469-108506 1038_na     345_aa purM Phosphoribosylformylglycinamidine cyclo-ligase
2503 LBIB01000009.1 GCA_001005065.1_02503 CDS open 108587-109852 1266_na     421_aa purD Phosphoribosylamine--glycine ligase
2504 LBIB01000009.1 GCA_001005065.1_02504 CDS open 110071-112176 2106_na     701_aa hypothetical protein
2505 LBIB01000009.1 GCA_001005065.1_02505 CDS open 112530-113906 1377_na     458_aa hypothetical protein
2506 LBIB01000009.1 GCA_001005065.1_02506 CDS open 113903-116653 2751_na     916_aa hypothetical protein
2507 LBIB01000009.1 GCA_001005065.1_02507 CDS open 116964-117890 927_na     308_aa znuA High-affinity zinc uptake system binding-protein ZnuA
2508 LBIB01000009.1 GCA_001005065.1_02508 CDS open 118110-118877 768_na     255_aa hypothetical protein
2509 LBIB01000009.1 GCA_001005065.1_02509 CDS open 118927-119154 228_na     75_aa rpmB_2 50S ribosomal protein L28
2510 LBIB01000009.1 GCA_001005065.1_02510 CDS open 119252-119422 171_na     56_aa rpmG2_2 50S ribosomal protein L33 2
2511 LBIB01000009.1 GCA_001005065.1_02511 CDS open 119607-119912 306_na     101_aa rpsN 30S ribosomal protein S14
2512 LBIB01000009.1 GCA_001005065.1_02512 CDS open 119978-120235 258_na     85_aa rpmE2 50S ribosomal protein L31 type B
2513 LBIB01000009.1 GCA_001005065.1_02513 CDS open 120260-120382 123_na     40_aa hypothetical protein
2514 LBIB01000009.1 GCA_001005065.1_02514 CDS open 120382-120549 168_na     55_aa rpmF_2 50S ribosomal protein L32
2515 LBIB01000009.1 GCA_001005065.1_02515 CDS open 120701-122374 1674_na     557_aa hypothetical protein
2516 LBIB01000009.1 GCA_001005065.1_02516 CDS open 122531-123766 1236_na     411_aa Putative two-component membrane permease complex subunit SMU_747c
2517 LBIB01000009.1 GCA_001005065.1_02517 CDS open 123769-124623 855_na     284_aa hypothetical protein
2518 LBIB01000009.1 GCA_001005065.1_02518 CDS open 124930-126474 1545_na     514_aa ykoD_3 Putative HMPthiamine import ATP-binding protein YkoD
2519 LBIB01000009.1 GCA_001005065.1_02519 CDS open 126471-127241 771_na     256_aa ecfT_5 Energy-coupling factor transporter transmembrane protein EcfT
2520 LBIB01000009.1 GCA_001005065.1_02520 CDS open 127246-127878 633_na     210_aa hypothetical protein
2521 LBIB01000009.1 GCA_001005065.1_02521 CDS open 127913-129886 1974_na     657_aa btuD_24 Vitamin B12 import ATP-binding protein BtuD
2522 LBIB01000009.1 GCA_001005065.1_02522 CDS open 129883-131796 1914_na     637_aa btuD_25 Vitamin B12 import ATP-binding protein BtuD
2523 LBIB01000009.1 GCA_001005065.1_02523 CDS open 132167-132619 453_na     150_aa zur_1 Zinc uptake regulation protein
2524 LBIB01000009.1 GCA_001005065.1_02524 CDS open 132817-133164 348_na     115_aa hypothetical protein
2525 LBIB01000009.1 GCA_001005065.1_02525 CDS open 133233-133832 600_na     199_aa hypothetical protein
2526 LBIB01000009.1 GCA_001005065.1_02526 CDS open 134118-134819 702_na     233_aa putative ABC transporter ATP-binding protein
2527 LBIB01000009.1 GCA_001005065.1_02527 CDS open 134824-138237 3414_na     1137_aa hypothetical protein
2528 LBIB01000009.1 GCA_001005065.1_02528 CDS open 138245-138694 450_na     149_aa hypothetical protein
2529 LBIB01000009.1 GCA_001005065.1_02529 CDS open 138679-139026 348_na     115_aa hypothetical protein
2530 LBIB01000009.1 GCA_001005065.1_02530 CDS open 139286-139651 366_na     121_aa zur_2 Zinc uptake regulation protein
2531 LBIB01000009.1 GCA_001005065.1_02531 CDS open 139915-141072 1158_na     385_aa purK N5-carboxyaminoimidazole ribonucleotide synthase
2532 LBIB01000009.1 GCA_001005065.1_02532 CDS open 141056-141553 498_na     165_aa purE N5-carboxyaminoimidazole ribonucleotide mutase
2533 LBIB01000009.1 GCA_001005065.1_02533 CDS open 141700-142689 990_na     329_aa ccrA2 Crotonyl-CoA reductase
2534 LBIB01000009.1 GCA_001005065.1_02534 CDS open 142943-144898 1956_na     651_aa dxs 1-deoxy-D-xylulose-5-phosphate synthase
2535 LBIB01000009.1 GCA_001005065.1_02535 CDS open 145281-146810 1530_na     509_aa ytrF ABC transporter permease YtrF
2536 LBIB01000009.1 GCA_001005065.1_02536 CDS open 146819-148183 1365_na     454_aa hypothetical protein
2537 LBIB01000009.1 GCA_001005065.1_02537 CDS open 148345-149190 846_na     281_aa btuD_26 Vitamin B12 import ATP-binding protein BtuD
2538 LBIB01000009.1 GCA_001005065.1_02538 CDS open 149374-149694 321_na     106_aa hypothetical protein
2539 LBIB01000009.1 tRNA open 149970-150044 tRNA-Arg(tct)
2540 LBIB01000009.1 GCA_001005065.1_02540 CDS open 150453-151457 1005_na     334_aa hypothetical protein
2541 LBIB01000009.1 GCA_001005065.1_02541 CDS open 151555-152325 771_na     256_aa hypothetical protein
2542 LBIB01000009.1 GCA_001005065.1_02542 CDS open 152463-154121 1659_na     552_aa aldH1 4%2C4-diaponeurosporen-aldehyde dehydrogenase
2543 LBIB01000009.1 GCA_001005065.1_02543 CDS open 154108-155304 1197_na     398_aa ybiR Inner membrane protein YbiR
2544 LBIB01000009.1 GCA_001005065.1_02544 CDS open 155534-157912 2379_na     792_aa hypothetical protein
2545 LBIB01000009.1 GCA_001005065.1_02545 CDS open 158117-158986 870_na     289_aa murR HTH-type transcriptional regulator MurR
2546 LBIB01000009.1 GCA_001005065.1_02546 CDS open 159295-160080 786_na     261_aa potA Spermidineputrescine import ATP-binding protein PotA
2547 LBIB01000009.1 GCA_001005065.1_02547 CDS open 160082-162952 2871_na     956_aa hypothetical protein
2548 LBIB01000009.1 GCA_001005065.1_02548 CDS open 163062-164270 1209_na     402_aa phnW 2-aminoethylphosphonate--pyruvate transaminase
2549 LBIB01000009.1 GCA_001005065.1_02549 CDS open 164349-165134 786_na     261_aa phnX Phosphonoacetaldehyde hydrolase
2550 LBIB01000009.1 GCA_001005065.1_02550 CDS open 165168-165380 213_na     70_aa hypothetical protein
2551 LBIB01000009.1 GCA_001005065.1_02551 CDS open 165377-166045 669_na     222_aa hypothetical protein
2552 LBIB01000009.1 GCA_001005065.1_02552 CDS open 166238-168382 2145_na     714_aa hypothetical protein
2553 LBIB01000009.1 GCA_001005065.1_02553 CDS open 168638-170770 2133_na     710_aa dnaG DNA primase
2554 LBIB01000009.1 GCA_001005065.1_02554 CDS open 171227-172249 1023_na     340_aa rihA_4 Pyrimidine-specific ribonucleoside hydrolase RihA
2555 LBIB01000009.1 GCA_001005065.1_02555 CDS open 172292-173611 1320_na     439_aa dgt Deoxyguanosinetriphosphate triphosphohydrolase-like protein
2556 LBIB01000009.1 GCA_001005065.1_02556 CDS open 173777-174424 648_na     215_aa hypothetical protein
2557 LBIB01000009.1 GCA_001005065.1_02557 CDS open 174682-176337 1656_na     551_aa hypothetical protein
2558 LBIB01000009.1 GCA_001005065.1_02558 CDS open 176554-179169 2616_na     871_aa hypothetical protein
2559 LBIB01000009.1 GCA_001005065.1_02559 CDS open 179623-180981 1359_na     452_aa alr Alanine racemase
2560 LBIB01000009.1 GCA_001005065.1_02560 CDS open 181277-182692 1416_na     471_aa yhdG_3 putative amino acid permease YhdG
2561 LBIB01000009.1 GCA_001005065.1_02561 CDS open 182770-183255 486_na     161_aa hypothetical protein
2562 LBIB01000009.1 GCA_001005065.1_02562 CDS open 183619-184101 483_na     160_aa luxS S-ribosylhomocysteine lyase
2563 LBIB01000009.1 GCA_001005065.1_02563 CDS open 184288-186324 2037_na     678_aa recQ ATP-dependent DNA helicase RecQ
2564 LBIB01000009.1 GCA_001005065.1_02564 CDS open 186537-187718 1182_na     393_aa metB Cystathionine gamma-synthase
2565 LBIB01000009.1 GCA_001005065.1_02565 CDS open 187815-188837 1023_na     340_aa cbs Putative cystathionine beta-synthase
2566 LBIB01000009.1 GCA_001005065.1_02566 CDS open 189656-189862 207_na     68_aa hypothetical protein
2567 LBIB01000009.1 GCA_001005065.1_02567 CDS open 189961-191280 1320_na     439_aa hypothetical protein
2568 LBIB01000009.1 GCA_001005065.1_02568 CDS open 192073-192162 90_na     29_aa hypothetical protein
2569 LBIB01000009.1 GCA_001005065.1_02569 CDS open 192217-192645 429_na     142_aa hypothetical protein
2570 LBIB01000009.1 GCA_001005065.1_02570 CDS open 192603-193337 735_na     244_aa dasR HTH-type transcriptional repressor DasR
2571 LBIB01000009.1 GCA_001005065.1_02571 CDS open 193561-194991 1431_na     476_aa bglF_3 PTS system beta-glucoside-specific EIIBCA component
2572 LBIB01000009.1 GCA_001005065.1_02572 CDS open 195029-196063 1035_na     344_aa hypothetical protein
2573 LBIB01000009.1 GCA_001005065.1_02573 CDS open 196141-196878 738_na     245_aa hypothetical protein
2574 LBIB01000009.1 GCA_001005065.1_02574 CDS open 196888-197319 432_na     143_aa hypothetical protein
2575 LBIB01000009.1 GCA_001005065.1_02575 CDS open 197530-197751 222_na     73_aa hypothetical protein
2576 LBIB01000009.1 GCA_001005065.1_02576 CDS open 198117-199127 1011_na     336_aa hpr_2 Hydroxypyruvate reductase
2577 LBIB01000009.1 GCA_001005065.1_02577 CDS open 199367-200302 936_na     311_aa hypothetical protein
2578 LBIB01000009.1 GCA_001005065.1_02578 CDS open 200299-201186 888_na     295_aa btuD_27 Vitamin B12 import ATP-binding protein BtuD
2579 LBIB01000009.1 GCA_001005065.1_02579 CDS open 201287-201655 369_na     122_aa ytrA_2 HTH-type transcriptional repressor YtrA
2580 LBIB01000009.1 GCA_001005065.1_02580 CDS open 201910-202140 231_na     76_aa hypothetical protein
2581 LBIB01000009.1 GCA_001005065.1_02581 CDS open 202113-202913 801_na     266_aa cntF Metal-staphylopine import system ATP-binding protein CntF
2582 LBIB01000009.1 GCA_001005065.1_02582 CDS open 202910-203764 855_na     284_aa oppD Oligopeptide transport ATP-binding protein OppD
2583 LBIB01000009.1 GCA_001005065.1_02583 CDS open 203761-204792 1032_na     343_aa hypothetical protein
2584 LBIB01000009.1 GCA_001005065.1_02584 CDS open 204789-205766 978_na     325_aa gsiC_3 Glutathione transport system permease protein GsiC
2585 LBIB01000009.1 GCA_001005065.1_02585 CDS open 205897-207594 1698_na     565_aa sgrR HTH-type transcriptional regulator SgrR
2586 LBIB01000009.1 GCA_001005065.1_02586 CDS open 207729-208496 768_na     255_aa coaX Type III pantothenate kinase
2587 LBIB01000009.1 GCA_001005065.1_02587 CDS open 208857-212564 3708_na     1235_aa dtpD Dipeptide permease D
2588 LBIB01000009.1 GCA_001005065.1_02588 CDS open 212893-213849 957_na     318_aa rhaR_6 HTH-type transcriptional activator RhaR
2589 LBIB01000009.1 GCA_001005065.1_02589 CDS open 213943-215343 1401_na     466_aa hypothetical protein
2590 LBIB01000009.1 GCA_001005065.1_02590 CDS open 215552-216910 1359_na     452_aa hypothetical protein
2591 LBIB01000009.1 GCA_001005065.1_02591 CDS open 217458-219533 2076_na     691_aa beta-galIII Beta-galactosidase III